BLASTX nr result
ID: Cimicifuga21_contig00004027
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00004027
(1878 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera] 156 2e-35
ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2... 139 3e-30
ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein... 132 2e-28
ref|NP_191479.1| F-box/LRR-repeat protein [Arabidopsis thaliana]... 132 4e-28
ref|NP_176127.1| F-box protein [Arabidopsis thaliana] gi|3740953... 130 2e-27
>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
Length = 607
Score = 156 bits (395), Expect = 2e-35
Identities = 148/466 (31%), Positives = 224/466 (48%), Gaps = 20/466 (4%)
Frame = +2
Query: 281 RDRISVLPDSIIHHIFSFLDTRSVVQTSSLSNRWRHLWESSPYLNFYVE--GKDFHLSDD 454
RD IS LPD ++ HI SFL T+ V TS LS RWR+LW S P L+F E L +
Sbjct: 9 RDIISNLPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDDELWLNPSTLVEL 68
Query: 455 LQKLNDFMDFVDRVLTLRDASSIHKFTLICEEELYTTRVYTWLMAALKRCVQKLDLVLIV 634
+++ F +FVD VL + S I KF L + + VY+W+ AL+R VQ+LDL L++
Sbjct: 69 EERIIMFQNFVDGVLRHSEVSCIKKFRLGYRDNNLDS-VYSWICIALERRVQELDLHLLI 127
Query: 635 DQPMEFPHHLFTSNVKVLKLSGCFGDVNIRMPYSMCSANKIKTLDLDLVKLPDGDSNGEL 814
D +E P F V+ C ++I + S +K L L V+ D DS +L
Sbjct: 128 DWRVELPPMFFICKTLVVVKLSCALFLDIPTTVWLPS---LKALHLKSVEYSDDDSIQKL 184
Query: 815 FLSCPVLKKLILSRCAISHLRMLTISCPLLESLDLI-------SGYDNEDDFCKIRICCP 973
CPVL++L++ R + ++ +S P L+ L + Y+ ED K+ + P
Sbjct: 185 LSGCPVLEELVIEREERDNQWVVNVSNPSLKILRIFFFTDGFAHPYEQEDQDYKVVVDAP 244
Query: 974 NLKSLMCVCDTHWDCSLESLPALTDAHIAILGDVEMEKE-------VYSQLLIKVLKGIS 1132
NL+ L D ++ LP+L A I + D E +E Y + ++L IS
Sbjct: 245 NLEYLSITDYLSKDYFVKDLPSLVKAFIDVEQDSEEFEESPHNGGISYHGPIYELLGRIS 304
Query: 1133 NVKALKLSFHVLKALADPEILEMLPRLFHNLRDLT-LEVGDDTFMMLNCAIANLLKTLPC 1309
NVK L L+ L +L+ LP FHN+ L L +G + L N L + P
Sbjct: 305 NVKCLSLTGVTLDSLSGTIGDYKLP-TFHNMTRLEFLFIGGFNWDFL----PNFLHSSPN 359
Query: 1310 IETFVLERYKDTALSLHEMGEGWEEGLPV-HCVLHSLKTVKIYNSYGREDELKFLKFILE 1486
+E V+E T + + EGW L V C++ LK ++I G + EL+ ++++L+
Sbjct: 360 LEALVIE----TGYTNELIPEGWLMPLQVPACLVLHLKEIEIRRIVGEDYELEAVEYLLK 415
Query: 1487 KAIFLKDIYITATTYLNLNKFRV--HLLTLPRASSDVSIRFHLGVE 1618
A L+ + I +F V LL LPR S + G+E
Sbjct: 416 NAEVLQQMTIDCHESYMDQEFCVCKKLLGLPRGSRSCFVVSSKGIE 461
>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
predicted protein [Populus trichocarpa]
Length = 460
Score = 139 bits (350), Expect = 3e-30
Identities = 142/456 (31%), Positives = 214/456 (46%), Gaps = 18/456 (3%)
Frame = +2
Query: 290 ISVLPDSIIHHIFSFLDTRSVVQTSSLSNRWRHLWESSPYLNFYVEGKDFHLSDDLQKLN 469
I LPD+++ HI SFL T + V+TS LS +W HLW+S+ L F F L +KL
Sbjct: 28 IGNLPDALLEHILSFLSTEAAVRTSILSKKWLHLWKSTTNLTF------FGLKSPKRKL- 80
Query: 470 DFMDFVDRVLTLRDASSIHKFTLICEEELYTTRVYTWLMAALKRCVQKLDLVL-IVDQPM 646
FMDFVDRVL LR S+I +F L CE + +RV TW+ AA+ R V+ L L L +
Sbjct: 81 -FMDFVDRVLALRGPSNIVQFYLSCEVKDDPSRVGTWISAAVNRNVKDLYLELRDFEASF 139
Query: 647 EFPHHLFTSNVKVLKLSGCFGDVNIRMPY-----SMCSANKIKTLDLDLVKLPDGDSNGE 811
PH LF N + L ++ I MPY S S + +K L+L V D S +
Sbjct: 140 VLPHCLF--NCETLT------ELEINMPYILKLPSSISLSCLKILNLYEVIFTDDHSTQQ 191
Query: 812 LFLSCPVLKKLILSRCAISHLRMLTISCPLLESLDLISGYDNED---DFCKIRICCPNLK 982
LF S P L +L + C +L ++IS P L+SLD+ + C +RI +L
Sbjct: 192 LF-SLPNLVELEIHECNWMNLVAVSISAPKLQSLDIHEPCQSSPASLGGCHVRIFGTHLA 250
Query: 983 SLMCVCDTHWD-CSLESLPALTDAHIAILGDVEMEKEVYSQLLIKVLKGISNVKALKLSF 1159
+ D C ES ++ + I+I + ++ + K+L+GIS+ ++L L+
Sbjct: 251 DFTIIGTLSNDYCLYES--SVVETCISIFSAADKPRQT-AYRASKLLEGISSAQSLCLTT 307
Query: 1160 HVLKALADPEILEMLPRLFHNLRDLTLEVGDDTFMMLNCAIANLLKTLPCIETFVLERYK 1339
+V+ L D L P F NL L E + + + +++ P L+ Y
Sbjct: 308 NVVDVLDDAPELLAFPLEFRNLTSLLFESEESN--LHSDGFWHIIYNSP--HLIALQFYG 363
Query: 1340 DTALSL-HEMGEGWEEGLPVHCVLHSLKTVKIYNSYGREDELKFLKFILEKAIFLK--DI 1510
+ + E W C L LK +++ G E EL + F+L+ A L+ DI
Sbjct: 364 VSMPKVPSNCREDWTLDPSPPCFLSCLKFIQVGRFGGDEKELDAVGFLLKNATALESMDI 423
Query: 1511 YITATTYLN-----LNKFRVHLLTLPRASSDVSIRF 1603
+ + + N+ LL LPR S +I F
Sbjct: 424 IYSGSARRDQGVDKTNEIHQQLLALPRWSEIGNINF 459
>ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein At5g02930-like [Vitis
vinifera]
Length = 610
Score = 132 bits (333), Expect = 2e-28
Identities = 143/494 (28%), Positives = 239/494 (48%), Gaps = 43/494 (8%)
Frame = +2
Query: 281 RDRISVLPDSIIHHIFSFLDTRSVVQTSSLSNRWRHLWESSPYLNFYVEGKDFHLSDDLQ 460
+D IS L DSI+ I SFL + VV TS LS RW+ LW P L F +D H
Sbjct: 73 KDGISELSDSILIRILSFLPMKYVVATSILSKRWQFLWTMVPNLVFRFRRRDEH------ 126
Query: 461 KLNDFMDFVDRVLTLRDASSIHKFTL-ICEEELYTTRVYTWLMAALKRCVQKLDLVLIVD 637
F++ +D+ L L S I KF + + + + V W+ A ++ V++L L V
Sbjct: 127 ----FVNSIDKTLVLHQNSQIKKFLIDFTYQSQFQSSVNVWIRHATRKNVEELHLQFRVG 182
Query: 638 Q-----PMEFPHHL---FTSNVKVLKLSGCFGDVNIRMPYSMCSANKIKTLDLDLVKLPD 793
Q PM++ H L +N ++KLS F ++ P + S +KTL + V+L D
Sbjct: 183 QHIRSSPMDYAHALPQFLYANSSIVKLSLWFCNIK---PTWVISWPSLKTLSIGSVELCD 239
Query: 794 GDSNGELFLSCPVLKKLILSRCAISHLRMLTISCPLLESLDLISGYDNEDDFCK--IRIC 967
D E+ CP L+ L L C + L I+ L+ L + +D+ + ++I
Sbjct: 240 -DLIEEILSGCPALESLELHHC--FGINSLNITSASLKKLVINRYWDSSHSHHRSVLKIS 296
Query: 968 CPNLKSLMCVCDTHW-DCSLESLPALTDAHIAI-----LGDVEMEKEVYSQLLIKVLKGI 1129
PN++SL + + + +C ++++P+L DA + G+ + ++Y ++++K+LK +
Sbjct: 297 APNVQSLGILGNMYTKECRVKNVPSLFDASLNFELAMQEGNPKDHYKLYHKVVMKLLKSV 356
Query: 1130 SNVKALKLSFHVLKALADPEILEMLPRLFHNLRDLTLEVGDDTFMMLNCAIANLLKTLPC 1309
++VKAL + ++ L+ E + L L NL+ L L+ + + + IANLL++
Sbjct: 357 NHVKALTVGTWCIQVLSIFEGKD-LSSLLSNLKCLILDTHLNKWDL--PGIANLLQSSTH 413
Query: 1310 IETFVLERYKDTA-----------LSLHEMGEG--W--EEGLPVHCVLHSLKTVK----I 1432
+ETFV+ + LH E W EG+ + ++ +LKTVK I
Sbjct: 414 LETFVINMISPCSQQISVEVGFSFTDLHNFDEEKYWSSREGVLANSLI-NLKTVKIIGVI 472
Query: 1433 YNSYGREDELKFLKFILEKAIFLKDIYITA-------TTYLNLNKFRVHLLTLPRASSDV 1591
+N G E +KF+L+ A L+ + I A + + +LN + LL+ PRAS +
Sbjct: 473 WNQPGIELVFGLVKFLLKNARMLEKVEICAKRDSQSRSRWSSLNSAQ-SLLSFPRASPNA 531
Query: 1592 SIRFHLGVEA*QRL 1633
LG A RL
Sbjct: 532 VDAQVLGGSANHRL 545
>ref|NP_191479.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
gi|75264308|sp|Q9LX51.1|FBL64_ARATH RecName:
Full=F-box/LRR-repeat protein At3g59200
gi|7801670|emb|CAB91590.1| putative protein [Arabidopsis
thaliana] gi|26450835|dbj|BAC42525.1| unknown protein
[Arabidopsis thaliana] gi|29028916|gb|AAO64837.1|
At3g59200 [Arabidopsis thaliana]
gi|332646367|gb|AEE79888.1| F-box/LRR-repeat protein
[Arabidopsis thaliana]
Length = 520
Score = 132 bits (331), Expect = 4e-28
Identities = 134/458 (29%), Positives = 213/458 (46%), Gaps = 40/458 (8%)
Frame = +2
Query: 275 VERDRISVLPDSIIHHIFSFLDTRSVVQTSSLSNRWRHLWESSPYLNF----YVEGKDFH 442
V RDRIS LP+ ++ HI SFL T+ TS LS +WR+L+ L+F Y +GK
Sbjct: 4 VSRDRISSLPNPVVSHILSFLPTKEAASTSVLSKKWRYLFAYVTNLDFDDSDYQDGKP-- 61
Query: 443 LSDDLQKLNDFMDFVDRVLTLRDASSIHKFTLICEE-ELYTTRVYTWLMAALKRCVQKLD 619
D++ FM+FVDRVL L+ S++KF+L C ++ RV W++ L R V +LD
Sbjct: 62 -KSDVELSRSFMEFVDRVLALQGNGSVNKFSLECSNYDVDLARVTGWILNVLGRGVSELD 120
Query: 620 LVLIVDQPMEFPHHLFTSNVKVLKLSGCFGDVNIRMPYSMCSANKIKTLDLDLVKLPD-G 796
L I++ P+ P +F S V G D+ + + K+KTL +D V + + G
Sbjct: 121 L-SILEYPL--PSEIFVSKTLVRLKLGPANDLTLTLDRKDVFLPKLKTLYIDCVDVQERG 177
Query: 797 DSNGELFLSCPVLKKLILSRCAISHLRMLTISCPLLESLDLI--SGYDNEDDFCKIRICC 970
+L CPVL++L+L + + ++S L+ L Y+N +
Sbjct: 178 FGFVKLLSGCPVLEELVLMNIGWENWKFCSVSVKTLKRLTFFCEETYENPK---SVSFDT 234
Query: 971 PNLKSLMCVCDTHWDCSLESLP-----ALTDAHIAI------LGDVEMEKEVY------- 1096
PNL L + D P +L +AHI + GD + +E Y
Sbjct: 235 PNLVYL-----EYSDAIASKYPKVNFNSLVEAHIGLRLTEDQSGDADFSEEDYFSEGDEK 289
Query: 1097 SQLL---IKVLKGISNVKALKLSFHVLKALADPEILEMLPRLFHNLRDLTLEVGDDTFMM 1267
Q++ LKGIS V+ L LS ++ L E +P +F+NL LT+E + +
Sbjct: 290 KQMVGNATDFLKGISTVQILYLSAQAIEVLT--FCCEPIP-VFNNLIQLTIENNSE---I 343
Query: 1268 LNCAIANLLKTLPCIETFVLERYKDTALSLHEMGEG------WEEGLPVHCVLHS-LKTV 1426
++ LLK P +ET VL+R LH+ + + C+ S +K +
Sbjct: 344 RWDSLPGLLKNCPNLETLVLKRL------LHKYNKACGNVCCCKRPKQPSCLSSSPVKVL 397
Query: 1427 KIY----NSYGREDELKFLKFILEKAIFLKDIYITATT 1528
KI+ N E++ +K+ LEK L+++ + T
Sbjct: 398 KIFLFDDNDEEDGSEMRQIKYFLEKMPRLEELVVYYNT 435
>ref|NP_176127.1| F-box protein [Arabidopsis thaliana]
gi|374095392|sp|Q9LQC1.2|FB65_ARATH RecName:
Full=Putative F-box protein At1g58310
gi|332195413|gb|AEE33534.1| F-box protein [Arabidopsis
thaliana]
Length = 505
Score = 130 bits (326), Expect = 2e-27
Identities = 135/478 (28%), Positives = 221/478 (46%), Gaps = 52/478 (10%)
Frame = +2
Query: 281 RDRISVLPDSIIHHIFSFLDTRSVVQTSSLSNRWRHLWESSPYLNF-------------Y 421
RD IS LPDS++ HI SFL+T+ TS L+ +WR+L+ S P L+F
Sbjct: 7 RDIISGLPDSLLCHILSFLNTKEAASTSVLAKKWRYLFASVPNLDFDDSVHLRLGKRNPA 66
Query: 422 VEGKDF-----HLSDDLQKLNDFMDFVDRVLTLRDASSIHKFTLICEEELYTTRVYTWLM 586
V G+D+ SD L FMDFVD+VL L+D S +HKF+L + + R+ W++
Sbjct: 67 VSGEDYLKMINERSDQLS--TSFMDFVDQVLRLQDNSPLHKFSLKIRDCVDIVRIICWIL 124
Query: 587 AALKRCVQKLDLVLIVDQPMEFPHHLFTSNVKV-LKLS---GCFGDV-NIRMPYSMCSAN 751
L+R V L+L + + P +F S V LKLS G F DV ++ +P
Sbjct: 125 KVLERGVSDLELDMHLKWKSSLPSKIFLSETLVRLKLSVERGPFIDVEDVHLP------- 177
Query: 752 KIKTLDLDLVKL-PDGDSNGELFLSCPVLKKLILSRCAISHLRMLTISCPLLESLDLISG 928
K+KTL + VK G +L C +L++L L + +++S L+ L
Sbjct: 178 KLKTLHIVSVKFEKHGIGLNKLLSGCHILEELNLEYISWCLWDFVSVSLTTLKRLTFCGE 237
Query: 929 YDNEDDFCKIRICCPNLKSLMCVCDTHWDCSLESLPALTDAHIAI-LGDVEMEKEVYSQL 1105
+++ + PNL LM + S + +L +AHI + + + ++E+ +S
Sbjct: 238 VMQDENPISVSFNTPNLVYLMFTDAIADEYSTVNFDSLVEAHINLQMSEDQVEQTRFSDS 297
Query: 1106 -----------LIKVLKGISNVKALKLSFHVLKALADPEILEMLPRLFHNLRDLTLEVGD 1252
+++ GI NVK L LS + L+ L E +P LF+NL LT+E
Sbjct: 298 EGNMEGCMVANATELIMGICNVKILYLSVYTLEVLT--YCCEAIP-LFNNLTHLTIESNS 354
Query: 1253 DTFMMLNCAIANLLKTLPCIETFV----LERYKDTALSL-------HEMGEGWEEGLPV- 1396
+ +++ LLK P +ET V + R+ D + + E +E P
Sbjct: 355 EVGWE---SVSGLLKNSPNLETLVFKGLVHRFTDKCGDMCLCKPWEEDEEEEEDEETPTC 411
Query: 1397 --HCVLHSLKTVKIYNSYGREDELKF--LKFILEKAIFLKDIYITATTYLNLNKFRVH 1558
C + LK ++ Y E E + +K LEK ++ + + T ++ + +V+
Sbjct: 412 LSSCPVKVLKILEFGKIYDDEIEKRIDQVKHFLEKIPDIEQLILHYNTPVDEDVIKVY 469