BLASTX nr result
ID: Cimicifuga21_contig00003998
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00003998
(1840 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002521836.1| RNA-binding protein Nova-1, putative [Ricinu... 376 e-102
ref|XP_004159922.1| PREDICTED: uncharacterized LOC101221280 [Cuc... 325 2e-86
ref|XP_004137120.1| PREDICTED: uncharacterized protein LOC101221... 325 2e-86
ref|XP_002278761.1| PREDICTED: uncharacterized protein LOC100259... 315 3e-83
emb|CBI20623.3| unnamed protein product [Vitis vinifera] 290 9e-76
>ref|XP_002521836.1| RNA-binding protein Nova-1, putative [Ricinus communis]
gi|223538874|gb|EEF40472.1| RNA-binding protein Nova-1,
putative [Ricinus communis]
Length = 544
Score = 376 bits (966), Expect = e-102
Identities = 246/563 (43%), Positives = 304/563 (53%), Gaps = 11/563 (1%)
Frame = +3
Query: 177 DSNKRKLDXXXXXXXXXXXXXXRLFNNAESKRSRF--DESSETPSFSQASPYSDVAQKPA 350
D KRKLD R+ N+A+ KR R D S + PS YS+ P
Sbjct: 13 DGGKRKLDVFELAKQRAQEIASRIANDADLKRPRLVSDSSPDPPSL-----YSNSIPAPP 67
Query: 351 GQLTANTQAGSTPYSAQPGVHYGFQGSSKRIDIPNAKVGVIIGKGGETIKYLQLQSGARI 530
+ Y++Q ++G QG+SKRI IP+ KVGV+IGKGGETIK +QLQSGA+I
Sbjct: 68 SYTVS--------YASQQSQYHGSQGTSKRITIPSGKVGVVIGKGGETIKNIQLQSGAKI 119
Query: 531 HITKDTDADPYSQTRDVEITGTSEQISRAEQLIKDVIAETDXXXXXXXXXXXXXXXXXXX 710
ITKD DADP+S TRDVE+ GTSEQISRAE+LI DVIAETD
Sbjct: 120 QITKDQDADPHSLTRDVELMGTSEQISRAEELINDVIAETDAGGSASSAVHGLNTKQPGA 179
Query: 711 DQFSMKVPNDKVAWVIGKGGETIKSIQSRSGARLQIIPLHPPPGDTSTERTVYINGTQEQ 890
+QFS++VPNDKV +IGKGGETIK +QSRSGAR+QIIPLH PPGD +TERTVYING EQ
Sbjct: 180 EQFSIRVPNDKVGLLIGKGGETIKYMQSRSGARMQIIPLHLPPGDPTTERTVYINGLTEQ 239
Query: 891 IDSAKDLVNDVISGNRIRNLSTATSYPQSGYGPPGNWAQP---PMQQPGQGYAQPGSYAT 1061
I++AK+LVNDV++G RI + + ++SY Q Y GNWAQP PMQQP GYAQPG+ T
Sbjct: 240 IEAAKELVNDVLNGKRIIDPTGSSSYGQPTYPATGNWAQPGQTPMQQPQYGYAQPGNQPT 299
Query: 1062 APVPYYSNYPPQQAAWDQSNPPATHLQPXXXXXXXXXXXXXPTEAGSAQPNVNYGYGQTA 1241
P YY NY QQ AWDQSNP T + P + GSA +N Y QT
Sbjct: 300 PPA-YYGNY-TQQPAWDQSNP--TTMSQTQQMAGYGYYGQQP-QMGSAP--LNSSYNQTP 352
Query: 1242 PTATNNYDXXXXXXXXXXXXEAPAQAPQHDQQKQYATPGYGPPAASSQLDXXXXXXXXXX 1421
P A++ Y +Q P +QQ+ YAT YG A SSQ D
Sbjct: 353 PVASSGYGNSYSQQTSNYGQNISSQTPTLEQQRPYATSNYGSAAVSSQSD-GAISSQSTQ 411
Query: 1422 XXXXXXXXAYSQPQTVSPTGYGPSXXXXXXXXXXXXXXXXXXXXVQQPPHFLPPAQNSLP 1601
AY+Q Q P Y + Q + SL
Sbjct: 412 AAPAYPPPAYNQ-QVADPQTYWTA--------AGYAGQPPPQTGYDQTGYSQAGYGVSLS 462
Query: 1602 ASQPVYGQGGYPSQPAPAQPTYVQGTTPPVYG------XXXXXXXXXXXXXXLAYGSERN 1763
++QPVYGQGGYP QP+PA Y QGT P YG LAYG+E +
Sbjct: 463 SNQPVYGQGGYPLQPSPAAANYAQGTNPLGYGQPQLEAQPQSQPSNNGHSQSLAYGAEIH 522
Query: 1764 GDGNNTHSNYGSSPAVQEGAHSQ 1832
DG N++ +GS+P+V+E S+
Sbjct: 523 -DG-NSNPGHGSNPSVKEAVPSE 543
>ref|XP_004159922.1| PREDICTED: uncharacterized LOC101221280 [Cucumis sativus]
Length = 516
Score = 325 bits (833), Expect = 2e-86
Identities = 229/576 (39%), Positives = 285/576 (49%), Gaps = 22/576 (3%)
Frame = +3
Query: 174 TDSNKRKLDXXXXXXXXXXXXXX-RLFNNAESKRSRFDESSETPSFSQASPYSDVAQKPA 350
+D+NKRKL+ +L +NAESKR RF+ P+ +P P
Sbjct: 12 SDTNKRKLEENIQLAKQKAQEIVAKLVSNAESKRPRFEYEPPAPAPPPQNP-------PL 64
Query: 351 GQLTANTQAGSTPYSAQPGVHYGFQGSSKRIDIPNAKVGVIIGKGGETIKYLQLQSGARI 530
T +G+ Q G ++GFQ +SK+I+IPN KVG+IIGKGGETIKYLQLQSGA+I
Sbjct: 65 SSSTFTVSSGT-----QAGPYHGFQTTSKKINIPNIKVGLIIGKGGETIKYLQLQSGAKI 119
Query: 531 HITKDTDADPYSQTRDVEITGTSEQISRAEQLIKDVIAETDXXXXXXXXXXXXXXXXXXX 710
IT+D +ADP S TRDVE+ GTSEQ+SRAEQLI +VIAE D
Sbjct: 120 QITRDFEADPQSLTRDVELMGTSEQVSRAEQLINEVIAEADSGGSASTTNQAINSSQPGV 179
Query: 711 DQFSMKVPNDKVAWVIGKGGETIKSIQSRSGARLQIIPLHPPPGDTSTERTVYINGTQEQ 890
+QF MK+PN+KVA VIGKGGETIKSIQS+S AR+QIIPLH PPGDTSTER+VYING +EQ
Sbjct: 180 EQFVMKIPNNKVALVIGKGGETIKSIQSKSAARVQIIPLHLPPGDTSTERSVYINGLKEQ 239
Query: 891 IDSAKDLVNDVISGNRIRNLSTATSYPQSGYGPPGNWA----QPPM--QQPGQGYAQPGS 1052
I+SAK+L+N+VISG R+ +S TSY Q Y NW+ QPP+ QQP GYA
Sbjct: 240 IESAKELINEVISGKRL--VSETTSYAQPTYPSTNNWSQAGQQPPLQQQQPQYGYAAGTY 297
Query: 1053 YATAPVPYYSNYPPQQAAWDQSNPPATHLQPXXXXXXXXXXXXXPTEAGSAQPNV-NYGY 1229
PYYS YP Q A+WDQSN + +QP ++ GSA P +Y Y
Sbjct: 298 PPPQGPPYYSTYPAQVASWDQSN--QSTVQP-SDQSTGYNYYGQQSQVGSAPPQYHDYSY 354
Query: 1230 GQTAPTATNNYDXXXXXXXXXXXXEAPAQA---PQHDQQKQYATPGYGPPAASSQLDXXX 1400
GQ A + T+ YD +AP+ P +DQQ Y G P A S
Sbjct: 355 GQPASSGTHGYD-------QSYSQQAPSYGQIPPSYDQQNMYLNSGSAPSALPSSNGTSE 407
Query: 1401 XXXXXXXXXXXXXXXAY---SQPQTVSPTGYGPSXXXXXXXXXXXXXXXXXXXXVQQPPH 1571
Y Q Q++ TG S
Sbjct: 408 GTYPTAAYQASTGYWTYQTTDQTQSLPQTGNDQSGSYQTVSGGH---------------- 451
Query: 1572 FLPPAQNSLPASQPVYGQGGYP------SQPAPAQPTYVQGT--TPPVYGXXXXXXXXXX 1727
A PVYGQ YP S PAP P V T PP
Sbjct: 452 ----------AQPPVYGQSVYPPPPGVYSAPAPPPPEMVAPTQSQPP------------- 488
Query: 1728 XXXXLAYGSERNGDGNNTHSNYGSSPAVQEGAHSQS 1835
S + N++S +P VQE A+S+S
Sbjct: 489 --------SVETSEDGNSNSGQNLAPTVQENANSES 516
>ref|XP_004137120.1| PREDICTED: uncharacterized protein LOC101221280 [Cucumis sativus]
Length = 516
Score = 325 bits (833), Expect = 2e-86
Identities = 229/576 (39%), Positives = 285/576 (49%), Gaps = 22/576 (3%)
Frame = +3
Query: 174 TDSNKRKLDXXXXXXXXXXXXXX-RLFNNAESKRSRFDESSETPSFSQASPYSDVAQKPA 350
+D+NKRKL+ +L +NAESKR RF+ P+ +P P
Sbjct: 12 SDTNKRKLEENIQLAKQKAQEIVAKLVSNAESKRPRFEYEPPAPAPPPQNP-------PL 64
Query: 351 GQLTANTQAGSTPYSAQPGVHYGFQGSSKRIDIPNAKVGVIIGKGGETIKYLQLQSGARI 530
T +G+ Q G ++GFQ +SK+I+IPN KVG+IIGKGGETIKYLQLQSGA+I
Sbjct: 65 SSSTFTVSSGT-----QAGPYHGFQTTSKKINIPNIKVGLIIGKGGETIKYLQLQSGAKI 119
Query: 531 HITKDTDADPYSQTRDVEITGTSEQISRAEQLIKDVIAETDXXXXXXXXXXXXXXXXXXX 710
IT+D +ADP S TRDVE+ GTSEQ+SRAEQLI +VIAE D
Sbjct: 120 QITRDFEADPQSLTRDVELMGTSEQVSRAEQLINEVIAEADSGGSASTTNQAINSSQPGV 179
Query: 711 DQFSMKVPNDKVAWVIGKGGETIKSIQSRSGARLQIIPLHPPPGDTSTERTVYINGTQEQ 890
+QF MK+PN+KVA VIGKGGETIKSIQS+S AR+QIIPLH PPGDTSTER+VYING +EQ
Sbjct: 180 EQFVMKIPNNKVALVIGKGGETIKSIQSKSAARVQIIPLHLPPGDTSTERSVYINGLKEQ 239
Query: 891 IDSAKDLVNDVISGNRIRNLSTATSYPQSGYGPPGNWA----QPPM--QQPGQGYAQPGS 1052
I+SAK+L+N+VISG R+ +S TSY Q Y NW+ QPP+ QQP GYA
Sbjct: 240 IESAKELINEVISGKRL--VSETTSYAQPTYPSTNNWSQAGQQPPLQQQQPQYGYAAGTY 297
Query: 1053 YATAPVPYYSNYPPQQAAWDQSNPPATHLQPXXXXXXXXXXXXXPTEAGSAQPNV-NYGY 1229
PYYS YP Q A+WDQSN + +QP ++ GSA P +Y Y
Sbjct: 298 PPPQGPPYYSTYPAQVASWDQSN--QSTVQP-SDQSTGYNYYGQQSQVGSAPPQFHDYSY 354
Query: 1230 GQTAPTATNNYDXXXXXXXXXXXXEAPAQA---PQHDQQKQYATPGYGPPAASSQLDXXX 1400
GQ A + T+ YD +AP+ P +DQQ Y G P A S
Sbjct: 355 GQPASSGTHGYD-------QSYSQQAPSYGQIPPSYDQQNMYLNSGSAPSALPSSNGTSE 407
Query: 1401 XXXXXXXXXXXXXXXAY---SQPQTVSPTGYGPSXXXXXXXXXXXXXXXXXXXXVQQPPH 1571
Y Q Q++ TG S
Sbjct: 408 GTYPTAAYQASTGYWTYQTTDQTQSLPQTGNDQSGSYQTVSGGH---------------- 451
Query: 1572 FLPPAQNSLPASQPVYGQGGYP------SQPAPAQPTYVQGT--TPPVYGXXXXXXXXXX 1727
A PVYGQ YP S PAP P V T PP
Sbjct: 452 ----------AQPPVYGQSVYPPPPGVYSAPAPPPPEMVAPTQSQPP------------- 488
Query: 1728 XXXXLAYGSERNGDGNNTHSNYGSSPAVQEGAHSQS 1835
S + N++S +P VQE A+S+S
Sbjct: 489 --------SVETSEDGNSNSGQNLAPTVQENANSES 516
>ref|XP_002278761.1| PREDICTED: uncharacterized protein LOC100259454 [Vitis vinifera]
Length = 690
Score = 315 bits (806), Expect = 3e-83
Identities = 229/592 (38%), Positives = 283/592 (47%), Gaps = 62/592 (10%)
Frame = +3
Query: 243 RLFNNA---ESKRSRFDESSETPSFSQ-----ASPYSDVAQKPAGQLTANTQAGSTPYSA 398
RLF+NA E+KR R + + F +S SDV QKP STP SA
Sbjct: 77 RLFSNASNTEAKRPRVENGAGAGGFDSGDKGFSSAPSDVGQKPMI---------STP-SA 126
Query: 399 QPGVHYGFQGSSKRIDIPNAKVGVIIGKGGETIKYLQLQSGARIHITKDTDADPYSQTRD 578
P V YG+QG+SK+IDIPN +VGVIIGKGGETIKYLQLQSGA+I +T+D DADP S TR
Sbjct: 127 IP-VSYGYQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTRL 185
Query: 579 VEITGTSEQISRAEQLIKDVIAETDXXXXXXXXXXXXXXXXXXXDQFSMKVPNDKVAWVI 758
VE+ GT +QI++AEQLI DV++E + +QF MKVPN+KV +I
Sbjct: 186 VELMGTPDQIAKAEQLINDVLSEAEAGGSGIVSRRLTGQAGS--EQFVMKVPNNKVGLII 243
Query: 759 GKGGETIKSIQSRSGARLQIIPLHPPPGDTSTERTVYINGTQEQIDSAKDLVNDVISGNR 938
GKGGETIK++Q+R+GAR+Q+IPLH PPGDTS ERTV I+GT EQI+SAK LVN+VIS NR
Sbjct: 244 GKGGETIKNMQARTGARIQVIPLHLPPGDTSMERTVQIDGTSEQIESAKQLVNEVISENR 303
Query: 939 IRNLSTATSYPQSGY--GPPGNW----AQPPMQQPGQGYAQPGSYATAPVPYYSNYPPQQ 1100
IRN + A YPQ GY PP W PPMQQPG YAQPGSY P P Y+ P
Sbjct: 304 IRNPAMAGGYPQQGYQARPPSGWGAPPGAPPMQQPGYSYAQPGSY-PGPSPQYNMSQPAY 362
Query: 1101 AAWDQSN---------PPATHLQPXXXXXXXXXXXXXPTE---AGSAQPNVNYGYGQTAP 1244
A + Q N PP+ P + G + P N GY P
Sbjct: 363 AGYSQPNATGWDQTAAPPSQQTTPGSGYDYYGQQQTQQQQQAHGGPSGPADNSGYNYNQP 422
Query: 1245 TAT-----------NNYDXXXXXXXXXXXXEAPAQAPQHDQQKQY-ATPGYGPPAASSQ- 1385
A+ + Y P P +DQQ+ Y + GYG A +Q
Sbjct: 423 PASGYNQQGQGYPQDGYGGGYHAPAPQPGYGQPQPIPGYDQQQGYNSATGYGNVANPTQE 482
Query: 1386 -------LDXXXXXXXXXXXXXXXXXXAY-SQPQTVSPTGYGPSXXXXXXXXXXXXXXXX 1541
Y +Q + SP Y P
Sbjct: 483 GHTTSYGAQGETGQAPPSVQPSAIGQQGYNTQQPSPSPASYPPQGSNQPAYGMPPTSQTG 542
Query: 1542 XXXXVQQPP-------HFLPPAQNSLPASQPVYG--------QGGYPSQPAPAQPTYVQG 1676
QPP ++ PP PA+ PVYG QGGY +QPAP QP Y
Sbjct: 543 FG---SQPPAQSGYTTNYGPPQAQKAPANPPVYGQTQQSPSAQGGY-AQPAPVQPGYPHS 598
Query: 1677 TTPPVYGXXXXXXXXXXXXXXLAYGSERNGDGNNTHSNYGSSPAVQEGAHSQ 1832
PP +YG+ G S Y S+P V + + Q
Sbjct: 599 QQPPAQSGYAQTDSSSQRAAPSSYGTAAGQPGYGGPSAY-SAPTVTQAGYGQ 649
>emb|CBI20623.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 290 bits (742), Expect = 9e-76
Identities = 189/408 (46%), Positives = 232/408 (56%), Gaps = 27/408 (6%)
Frame = +3
Query: 243 RLFNNA---ESKRSRFDESSETPSFSQ-----ASPYSDVAQKPAGQLTANTQAGSTPYSA 398
RLF+NA E+KR R + + F +S SDV QKP STP SA
Sbjct: 77 RLFSNASNTEAKRPRVENGAGAGGFDSGDKGFSSAPSDVGQKPMI---------STP-SA 126
Query: 399 QPGVHYGFQGSSKRIDIPNAKVGVIIGKGGETIKYLQLQSGARIHITKDTDADPYSQTRD 578
P V YG+QG+SK+IDIPN +VGVIIGKGGETIKYLQLQSGA+I +T+D DADP S TR
Sbjct: 127 IP-VSYGYQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTRL 185
Query: 579 VEITGTSEQISRAEQLIKDVIAETDXXXXXXXXXXXXXXXXXXXDQFSMKVPNDKVAWVI 758
VE+ GT +QI++AEQLI DV++E + +QF MKVPN+KV +I
Sbjct: 186 VELMGTPDQIAKAEQLINDVLSEAEAGGSGIVSRRLTGQAGS--EQFVMKVPNNKVGLII 243
Query: 759 GKGGETIKSIQSRSGARLQIIPLHPPPGDTSTERTVYINGTQEQIDSAKDLVNDVISGNR 938
GKGGETIK++Q+R+GAR+Q+IPLH PPGDTS ERTV I+GT EQI+SAK LVN+VIS NR
Sbjct: 244 GKGGETIKNMQARTGARIQVIPLHLPPGDTSMERTVQIDGTSEQIESAKQLVNEVISENR 303
Query: 939 IRNLSTATSYPQSGY--GPPGNW----AQPPMQQPGQGYAQPGSYATAPVPYYSNYPPQQ 1100
IRN + A YPQ GY PP W PPMQQPG YAQPGSY P P Y+ P
Sbjct: 304 IRNPAMAGGYPQQGYQARPPSGWGAPPGAPPMQQPGYSYAQPGSY-PGPSPQYNMSQPAY 362
Query: 1101 AAWDQSN---------PPATHLQPXXXXXXXXXXXXXPTE---AGSAQPNVNYGYGQTAP 1244
A + Q N PP+ P + G + P N GY P
Sbjct: 363 AGYSQPNATGWDQTAAPPSQQTTPGSGYDYYGQQQTQQQQQAHGGPSGPADNSGYNYNQP 422
Query: 1245 TATNNYDXXXXXXXXXXXXEAPAQAPQHDQQKQY-ATPGYGPPAASSQ 1385
A + Y+ Q +DQQ+ Y + GYG A +Q
Sbjct: 423 PA-SGYN---------------QQGQGYDQQQGYNSATGYGNVANPTQ 454