BLASTX nr result

ID: Cimicifuga21_contig00003992 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003992
         (2052 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62240.1| hypothetical protein VITISV_033728 [Vitis vinifera]   762   0.0  
ref|XP_002271404.1| PREDICTED: transmembrane protein 87A [Vitis ...   761   0.0  
ref|XP_002532728.1| ptm1, putative [Ricinus communis] gi|2235275...   740   0.0  
ref|XP_003547787.1| PREDICTED: transmembrane protein 87B-like [G...   730   0.0  
ref|XP_002304119.1| predicted protein [Populus trichocarpa] gi|2...   729   0.0  

>emb|CAN62240.1| hypothetical protein VITISV_033728 [Vitis vinifera]
          Length = 510

 Score =  762 bits (1967), Expect = 0.0
 Identities = 368/489 (75%), Positives = 424/489 (86%), Gaps = 6/489 (1%)
 Frame = +2

Query: 233  KASVHDYSGQKFIAKGNAFVVYGGSEGIFSSLPNQNSS------ESFIRFEKIIFRRTKE 394
            +ASVH+Y+G +F+ KGNAFVV+GGSEGI+SS P  N++      ++FIRFEKI FRR KE
Sbjct: 22   EASVHEYAGVRFVGKGNAFVVHGGSEGIYSSHPTHNTTAAVANGDAFIRFEKIKFRRPKE 81

Query: 395  ASLTGSVFVQAIVFEVEDREMLGGSAYGGQRAVCCTPDLAKLGVCTQGEIIHRSSTKDPN 574
             S   S  +QA+VFEV+DRE +GGSAYGGQRA+CCT DLAKLGVCTQGEIIHR S K+P+
Sbjct: 82   FSNFSSGLIQAVVFEVDDRETIGGSAYGGQRAICCTADLAKLGVCTQGEIIHRPSAKNPD 141

Query: 575  WPYIFGVSFSNDDLVATLPPKSIQITKTGMYNLYFIHCDPNLKGLVMEGKTIWKNPTGYL 754
            WP +FGVSFS D LVA L  KS++ITKTGMYNLYFIHCDP LK +V+EGKTIWKNPTGYL
Sbjct: 142  WPQVFGVSFSEDKLVARLQLKSMEITKTGMYNLYFIHCDPKLKEVVLEGKTIWKNPTGYL 201

Query: 755  PGRMAPLMNFYGFMSIAYLVLGIFWFSQNARFWREVLQLQNCITVVITLGMFEMALWYFD 934
            PGRMAPLMNFYG MS+A+++LGIFWFSQNARFWREVL LQNC+T+VITLGMFEMA WYFD
Sbjct: 202  PGRMAPLMNFYGIMSLAFVILGIFWFSQNARFWREVLPLQNCVTLVITLGMFEMAFWYFD 261

Query: 935  YVEFNKTGVRPTGITLWAVTFGTIKKTVARVIILMVSMGYGVVRPTLGGLTSKVILLGGT 1114
            Y +FNKTGVRPT  T+WAVTFGT+K+TVAR+IILMVSMGYGVVRPTLGGLTSKV++LG T
Sbjct: 262  YAQFNKTGVRPTATTIWAVTFGTVKRTVARLIILMVSMGYGVVRPTLGGLTSKVVMLGVT 321

Query: 1115 FFVASEVLELVEFVGTINDLSGKARLFLVLPVAIMDAFFILWIFASLSSTLNKLQARRIM 1294
            FF+ASEVLELVE VG ++DLSGKARLFLVLPVAI+DAFFILWIF SLS+TL KLQ +R+M
Sbjct: 322  FFMASEVLELVENVGAVSDLSGKARLFLVLPVAILDAFFILWIFTSLSATLTKLQVKRMM 381

Query: 1295 AKLEIYRKFTNALAVAVIVSVGWICYELYFKSIDVYNERWKSAWIIPAFWQILSFSLLCV 1474
            AKL+IYRKFTNALAVAVIVSVGWICYELYFKS DVYNE+W++AWIIPAFWQ+LSFSLLCV
Sbjct: 382  AKLDIYRKFTNALAVAVIVSVGWICYELYFKSSDVYNEQWQNAWIIPAFWQVLSFSLLCV 441

Query: 1475 ICALWAPSQNSTRYAYXXXXXXXFDKEDTLTLIKPSHVLSRDVRISPESRTIQSGEVSVN 1654
            ICALWAPSQNSTRYAY       FDK+DTLTLIKPS +  +DVR  PE+R++  G    +
Sbjct: 442  ICALWAPSQNSTRYAYSDDGSEEFDKDDTLTLIKPSPMPMKDVRGGPEARSLHGGNGLPS 501

Query: 1655 MDNEEDKKE 1681
             D EE+K E
Sbjct: 502  EDVEEEKTE 510


>ref|XP_002271404.1| PREDICTED: transmembrane protein 87A [Vitis vinifera]
            gi|297742979|emb|CBI35846.3| unnamed protein product
            [Vitis vinifera]
          Length = 510

 Score =  761 bits (1965), Expect = 0.0
 Identities = 366/489 (74%), Positives = 424/489 (86%), Gaps = 6/489 (1%)
 Frame = +2

Query: 233  KASVHDYSGQKFIAKGNAFVVYGGSEGIFSSLPNQNSS------ESFIRFEKIIFRRTKE 394
            +ASVH+Y+G +F+ KGNAFVV+GGSEGI+SS P  N++      ++FIRFEKI FRR KE
Sbjct: 22   EASVHEYAGVRFVGKGNAFVVHGGSEGIYSSHPTHNTTAAVANGDAFIRFEKIKFRRPKE 81

Query: 395  ASLTGSVFVQAIVFEVEDREMLGGSAYGGQRAVCCTPDLAKLGVCTQGEIIHRSSTKDPN 574
             S   S  +QA+VFEV+DRE +GGSAYGGQRA+CCT DLAKLGVCTQGEIIHR S K+P+
Sbjct: 82   FSNFSSGLIQAVVFEVDDRETIGGSAYGGQRAICCTADLAKLGVCTQGEIIHRPSAKNPD 141

Query: 575  WPYIFGVSFSNDDLVATLPPKSIQITKTGMYNLYFIHCDPNLKGLVMEGKTIWKNPTGYL 754
            WP +FGVSFS D LVA L  KS++ITKTGMYNLYFIHCDP LK +V+EGKTIWKNPTGYL
Sbjct: 142  WPQVFGVSFSEDKLVARLQVKSMEITKTGMYNLYFIHCDPKLKEVVLEGKTIWKNPTGYL 201

Query: 755  PGRMAPLMNFYGFMSIAYLVLGIFWFSQNARFWREVLQLQNCITVVITLGMFEMALWYFD 934
            PGRMAPLMNFYG MS+A+++LGIFWFSQNARFWREVL LQNC+T+VITLGMFEMA WYFD
Sbjct: 202  PGRMAPLMNFYGIMSLAFVILGIFWFSQNARFWREVLPLQNCVTLVITLGMFEMAFWYFD 261

Query: 935  YVEFNKTGVRPTGITLWAVTFGTIKKTVARVIILMVSMGYGVVRPTLGGLTSKVILLGGT 1114
            Y +FNKTGVRPT  T+WAVTFGT+K+TVAR+IILMVSMGYGVVRPTLGGLTSKV++LG T
Sbjct: 262  YAQFNKTGVRPTATTIWAVTFGTVKRTVARLIILMVSMGYGVVRPTLGGLTSKVVMLGVT 321

Query: 1115 FFVASEVLELVEFVGTINDLSGKARLFLVLPVAIMDAFFILWIFASLSSTLNKLQARRIM 1294
            FF+ASEVLELVE VG ++DLSGKARLFLVLPVAI+DAFFILWIF SLS+TL KLQ +R+M
Sbjct: 322  FFMASEVLELVENVGAVSDLSGKARLFLVLPVAILDAFFILWIFTSLSATLTKLQVKRMM 381

Query: 1295 AKLEIYRKFTNALAVAVIVSVGWICYELYFKSIDVYNERWKSAWIIPAFWQILSFSLLCV 1474
            AKL+IYRKFTNA+AVAVIVSVGWICYELYFKS DVYNE+W++AWIIPAFWQ+LSFSLLCV
Sbjct: 382  AKLDIYRKFTNAMAVAVIVSVGWICYELYFKSSDVYNEQWQNAWIIPAFWQVLSFSLLCV 441

Query: 1475 ICALWAPSQNSTRYAYXXXXXXXFDKEDTLTLIKPSHVLSRDVRISPESRTIQSGEVSVN 1654
            ICALWAPSQNSTRYAY       FDK+DTLTLIKPS +  +D+R  PE+R++  G    +
Sbjct: 442  ICALWAPSQNSTRYAYSDDGSEEFDKDDTLTLIKPSPMPMKDIRGGPEARSLHGGNGLPS 501

Query: 1655 MDNEEDKKE 1681
             D EE+K E
Sbjct: 502  EDVEEEKTE 510


>ref|XP_002532728.1| ptm1, putative [Ricinus communis] gi|223527536|gb|EEF29659.1| ptm1,
            putative [Ricinus communis]
          Length = 512

 Score =  740 bits (1911), Expect = 0.0
 Identities = 355/493 (72%), Positives = 424/493 (86%), Gaps = 10/493 (2%)
 Frame = +2

Query: 233  KASVHDYSGQKFIAKGNAFVVYGGSEGIFSSLPNQN---------SSESFIRFEKIIFRR 385
            + SVH+Y G +F+AKGNAFVV+GG+EGI+SS  + +         S +S+IRFEKI FRR
Sbjct: 20   EGSVHEYKGDRFVAKGNAFVVHGGNEGIYSSTNSGDFNESNAIPASGDSYIRFEKIKFRR 79

Query: 386  TKEASLTGSVFVQAIVFEVEDREMLGGSAYGGQRAVCCTPDLAKLGVCTQGEIIHRSSTK 565
            T++ +   S  VQ IVFEVEDRE +GGSAYGGQRA+CCT DLAKLGVC+QGEIIHR STK
Sbjct: 80   TEDFANFTSGLVQVIVFEVEDRETIGGSAYGGQRAICCTADLAKLGVCSQGEIIHRPSTK 139

Query: 566  DPNWPYIFGVSFSNDDLVATLPPKSIQITKTGMYNLYFIHCDPNLKGLVMEGKTIWKNPT 745
            DP+WP++FGVSF+ ++L+ATLP +S++IT+TGMYNLYF+HCDPNLK + +EGKTIWKNP 
Sbjct: 140  DPSWPHVFGVSFNENELMATLPSRSLEITRTGMYNLYFMHCDPNLKEVFVEGKTIWKNPA 199

Query: 746  GYLPGRMAPLMNFYGFMSIAYLVLGIFWFSQNARFWREVLQLQNCITVVITLGMFEMALW 925
            GYLPGRMAPLM FYGFMS+A+++LG+FWF Q AR+W+EV  L NCITVVITLGMFEMALW
Sbjct: 200  GYLPGRMAPLMKFYGFMSLAFVLLGVFWFYQYARYWKEVFPLLNCITVVITLGMFEMALW 259

Query: 926  YFDYVEFNKTGVRPTGITLWAVTFGTIKKTVARVIILMVSMGYGVVRPTLGGLTSKVILL 1105
            YFDY EFN+TGVRPTGIT+WAVTFG +K+TVAR+IILMVSMGYGVVRPTLGGLTSKVI+L
Sbjct: 260  YFDYAEFNETGVRPTGITIWAVTFGAVKRTVARLIILMVSMGYGVVRPTLGGLTSKVIML 319

Query: 1106 GGTFFVASEVLELVEFVGTINDLSGKARLFLVLPVAIMDAFFILWIFASLSSTLNKLQAR 1285
            G TFF+ASEVLELVE VG ++DLSGKARLFLVLPVAI+DAFFILWIF SLS+TLNKLQAR
Sbjct: 320  GVTFFLASEVLELVENVGAVSDLSGKARLFLVLPVAILDAFFILWIFKSLSATLNKLQAR 379

Query: 1286 RIMAKLEIYRKFTNALAVAVIVSVGWICYELYFKSIDVYNERWKSAWIIPAFWQILSFSL 1465
            R++ KL+IYRKFTNALAVAVIVSVGWICYE YFKS D+YNE W++AW+IPAFWQ+LSFSL
Sbjct: 380  RMLVKLDIYRKFTNALAVAVIVSVGWICYEFYFKSKDIYNEHWQNAWVIPAFWQVLSFSL 439

Query: 1466 LCVICALWAPSQNSTRYAYXXXXXXXFDKED-TLTLIKPSHVLSRDVRISPESRTIQSGE 1642
            LC+ICALWAPSQNS RYAY       FD++D +LTLIKPS + S+D+R + E+R +Q+  
Sbjct: 440  LCIICALWAPSQNSMRYAYSDDVGEEFDRDDSSLTLIKPSAMPSKDIRSASEARPVQANN 499

Query: 1643 VSVNMDNEEDKKE 1681
             + N D EEDK E
Sbjct: 500  SASNGDLEEDKTE 512


>ref|XP_003547787.1| PREDICTED: transmembrane protein 87B-like [Glycine max]
          Length = 507

 Score =  730 bits (1884), Expect = 0.0
 Identities = 351/490 (71%), Positives = 414/490 (84%), Gaps = 7/490 (1%)
 Frame = +2

Query: 233  KASVHDYSGQKFIAKGNAFVVYGGSEGIFSSLPNQNSS------ESFIRFEKIIFRRTKE 394
            +ASVHDY G+KF AKGNAFVV+GGSEGI++S PN   +      +S+IRFE+I FRR KE
Sbjct: 18   EASVHDYRGEKFAAKGNAFVVHGGSEGIYASAPNLTDAYPPPNPDSYIRFERITFRRNKE 77

Query: 395  ASLTGSVFVQAIVFEVEDREMLGGSAYGGQRAVCCTPDLAKLGVCTQGEIIHRSSTKDPN 574
             S   S  +QA+VFEVEDRE +GGSAYGGQRAVCCT DLAKLGVC +G++I+R S ++P+
Sbjct: 78   LSNFSSWPIQAVVFEVEDRETIGGSAYGGQRAVCCTGDLAKLGVCAEGQVIYRPSVENPD 137

Query: 575  WPYIFGVSFSNDDLVATLPPKSIQITKTGMYNLYFIHCDPNLKGLVMEGKTIWKNPTGYL 754
            WP +FGVSF  DD VA LP KSIQITKTGMYNLYFIHCD  LK LV+EGKT+WKNP+GYL
Sbjct: 138  WPQVFGVSFEMDDEVAVLPLKSIQITKTGMYNLYFIHCDTRLKELVVEGKTVWKNPSGYL 197

Query: 755  PGRMAPLMNFYGFMSIAYLVLGIFWFSQNARFWREVLQLQNCITVVITLGMFEMALWYFD 934
            PGRMAP+  FY FMS AY++LGIFWFSQ ARFW+EV  LQNCIT VITLGMFEMALWYFD
Sbjct: 198  PGRMAPMKVFYQFMSFAYVLLGIFWFSQYARFWKEVFPLQNCITAVITLGMFEMALWYFD 257

Query: 935  YVEFNKTGVRPTGITLWAVTFGTIKKTVARVIILMVSMGYGVVRPTLGGLTSKVILLGGT 1114
            Y EF++TG+RPTG T+WAVTFGT+K+T AR++IL+VSMGYGVVRPTLGGLTSKV++LGGT
Sbjct: 258  YAEFSETGIRPTGTTIWAVTFGTVKRTFARLVILLVSMGYGVVRPTLGGLTSKVVMLGGT 317

Query: 1115 FFVASEVLELVEFVGTINDLSGKARLFLVLPVAIMDAFFILWIFASLSSTLNKLQARRIM 1294
            FF+ASEVLELVE VG ++DLSGKA+LFLVLP A++D FFILWIF SLS+TL KLQ RR+M
Sbjct: 318  FFIASEVLELVENVGAVSDLSGKAKLFLVLPAAVLDVFFILWIFTSLSATLTKLQTRRMM 377

Query: 1295 AKLEIYRKFTNALAVAVIVSVGWICYELYFKSIDVYNERWKSAWIIPAFWQILSFSLLCV 1474
             KL+IYRKFTNALA AV+VSVGWICYELYFKS DVYNE+W++AWIIPAFWQ+LS+SLLCV
Sbjct: 378  IKLDIYRKFTNALAAAVLVSVGWICYELYFKSNDVYNEQWQNAWIIPAFWQVLSYSLLCV 437

Query: 1475 ICALWAPSQNSTRYAYXXXXXXXFDK-EDTLTLIKPSHVLSRDVRISPESRTIQSGEVSV 1651
            IC LWAPSQ++TRYAY       FD+ E TLTLIKPS + S+DVR  P++R +QS   + 
Sbjct: 438  ICILWAPSQSATRYAYRDDGSDEFDRDETTLTLIKPSPISSKDVRSVPDARPVQSSNGNS 497

Query: 1652 NMDNEEDKKE 1681
            N D EEDK+E
Sbjct: 498  NDDLEEDKRE 507


>ref|XP_002304119.1| predicted protein [Populus trichocarpa] gi|222841551|gb|EEE79098.1|
            predicted protein [Populus trichocarpa]
          Length = 498

 Score =  729 bits (1881), Expect = 0.0
 Identities = 353/484 (72%), Positives = 417/484 (86%), Gaps = 1/484 (0%)
 Frame = +2

Query: 233  KASVHDYSGQKFIAKGNAFVVYGGSEGIFSSLPNQNSSESFIRFEKIIFRRTKEASLTGS 412
            + SVH+Y G++F+ KGNAFVV+GGSEGI+SS  ++N +E     + I F+RT+E S   S
Sbjct: 21   EGSVHEYKGERFVGKGNAFVVHGGSEGIYSSA-SENVNE-----KSITFQRTQEFSNFSS 74

Query: 413  VFVQAIVFEVEDREMLGGSAYGGQRAVCCTPDLAKLGVCTQGEIIHRSSTKDPNWPYIFG 592
              VQAIVFEVEDRE +GGSAYGGQRAVCCT DLAKLGVC++GEIIHR STK+P WP +FG
Sbjct: 75   GLVQAIVFEVEDRESIGGSAYGGQRAVCCTADLAKLGVCSEGEIIHRPSTKNPGWPQVFG 134

Query: 593  VSFSNDDLVATLPPKSIQITKTGMYNLYFIHCDPNLKGLVMEGKTIWKNPTGYLPGRMAP 772
            V+F  D+LVATLP KSIQI++TGMYNLYF+HCDPNLK +V+EG TIWKNP+GYLPGRMAP
Sbjct: 135  VAFYADELVATLPSKSIQISRTGMYNLYFMHCDPNLKEVVVEGNTIWKNPSGYLPGRMAP 194

Query: 773  LMNFYGFMSIAYLVLGIFWFSQNARFWREVLQLQNCITVVITLGMFEMALWYFDYVEFNK 952
            LM FYGFMS+A+++LG+FWFSQ ARFW+EV  LQNCIT+VITLGMFEMA WYFDY EFN+
Sbjct: 195  LMKFYGFMSLAFVILGLFWFSQYARFWKEVFPLQNCITLVITLGMFEMAFWYFDYAEFNE 254

Query: 953  TGVRPTGITLWAVTFGTIKKTVARVIILMVSMGYGVVRPTLGGLTSKVILLGGTFFVASE 1132
            TG+RPTGIT+WAVTFGTIK++VAR++ILMVSMGYGVVRPTLGGLTSKV+L+G TFFVASE
Sbjct: 255  TGIRPTGITVWAVTFGTIKRSVARLVILMVSMGYGVVRPTLGGLTSKVLLVGVTFFVASE 314

Query: 1133 VLELVEFVGTINDLSGKARLFLVLPVAIMDAFFILWIFASLSSTLNKLQARRIMAKLEIY 1312
            VLELVE VG ++DLSGKA+LFLVLPVA +DAF I+WIF SLS+TL+KLQARR+M KL+IY
Sbjct: 315  VLELVENVGAVSDLSGKAKLFLVLPVAFLDAFIIIWIFKSLSATLSKLQARRMMVKLDIY 374

Query: 1313 RKFTNALAVAVIVSVGWICYELYFKSIDVYNERWKSAWIIPAFWQILSFSLLCVICALWA 1492
            RKFTNAL VAVIVSVGWICYELYFKS DVYNE+W++AW+IPAFWQ+LSFSLLC+ICALWA
Sbjct: 375  RKFTNALVVAVIVSVGWICYELYFKSKDVYNEQWQNAWVIPAFWQLLSFSLLCIICALWA 434

Query: 1493 PSQNSTRYAYXXXXXXXFDKED-TLTLIKPSHVLSRDVRISPESRTIQSGEVSVNMDNEE 1669
            PSQNS RYAY       FD++D TLTLIKPS + S+DVR SPE   + +   + N D EE
Sbjct: 435  PSQNSMRYAYSDDASDEFDRDDGTLTLIKPSTIPSKDVRSSPEPIPVHTSNGASNGDLEE 494

Query: 1670 DKKE 1681
            DK E
Sbjct: 495  DKTE 498


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