BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003981
         (605 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299667.1| predicted protein [Populus trichocarpa] gi|2...   106   4e-21
ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containi...   103   3e-20
gb|AAB65486.1| membrane-associated salt-inducible protein isolog...    97   3e-18
ref|NP_172560.2| pentatricopeptide repeat-containing protein [Ar...    97   3e-18
ref|XP_002529286.1| pentatricopeptide repeat-containing protein,...    95   1e-17

>ref|XP_002299667.1| predicted protein [Populus trichocarpa] gi|222846925|gb|EEE84472.1|
           predicted protein [Populus trichocarpa]
          Length = 562

 Score =  106 bits (264), Expect = 4e-21
 Identities = 51/76 (67%), Positives = 61/76 (80%)
 Frame = +3

Query: 3   SGHKMDQEVFCMAISRFIAEPEKKEXXXXXXHWMTGQGYVVDSSSRNLILKNSDMFGRHL 182
           SG+K+DQE+F MA+SR+IAEPEKK+       WM GQGYVVDSS+RNLILKNS +FGR L
Sbjct: 485 SGYKIDQELFLMAVSRYIAEPEKKDLLIQLLQWMPGQGYVVDSSTRNLILKNSHLFGRQL 544

Query: 183 IAGVLSKQHKMSKLLR 230
           IA +LSKQH  SK L+
Sbjct: 545 IAEILSKQHMTSKALK 560


>ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic [Vitis vinifera]
           gi|298204537|emb|CBI23812.3| unnamed protein product
           [Vitis vinifera]
          Length = 659

 Score =  103 bits (256), Expect = 3e-20
 Identities = 50/78 (64%), Positives = 61/78 (78%)
 Frame = +3

Query: 3   SGHKMDQEVFCMAISRFIAEPEKKEXXXXXXHWMTGQGYVVDSSSRNLILKNSDMFGRHL 182
           SG+K+DQE+F MA++R+IAEPEKKE       WM GQGYVVDSS+RN+ILKNS +FGR L
Sbjct: 582 SGYKIDQELFQMAVTRYIAEPEKKELLLHLLQWMPGQGYVVDSSTRNMILKNSHLFGRQL 641

Query: 183 IAGVLSKQHKMSKLLREN 236
           IA +LSKQH  +K L  N
Sbjct: 642 IAEMLSKQHARAKALISN 659


>gb|AAB65486.1| membrane-associated salt-inducible protein isolog; 88078-84012
           [Arabidopsis thaliana]
          Length = 652

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 48/80 (60%), Positives = 60/80 (75%)
 Frame = +3

Query: 3   SGHKMDQEVFCMAISRFIAEPEKKEXXXXXXHWMTGQGYVVDSSSRNLILKNSDMFGRHL 182
           SGHK+DQ  F +AISR+I++P+KKE       WM GQGYVVDSS+RNLILKNS MFGR L
Sbjct: 566 SGHKIDQVQFEIAISRYISQPDKKELLLQLLQWMPGQGYVVDSSTRNLILKNSHMFGRLL 625

Query: 183 IAGVLSKQHKMSKLLRENNP 242
           IA +LSK H  S+ + ++ P
Sbjct: 626 IAEILSKHHVASRPMIKSRP 645


>ref|NP_172560.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|122242678|sp|Q0WVV0.1|PPR31_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g10910, chloroplastic; Flags: Precursor
           gi|110741600|dbj|BAE98748.1| membrane-associated
           salt-inducible protein isolog [Arabidopsis thaliana]
           gi|332190541|gb|AEE28662.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 664

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 48/80 (60%), Positives = 60/80 (75%)
 Frame = +3

Query: 3   SGHKMDQEVFCMAISRFIAEPEKKEXXXXXXHWMTGQGYVVDSSSRNLILKNSDMFGRHL 182
           SGHK+DQ  F +AISR+I++P+KKE       WM GQGYVVDSS+RNLILKNS MFGR L
Sbjct: 578 SGHKIDQVQFEIAISRYISQPDKKELLLQLLQWMPGQGYVVDSSTRNLILKNSHMFGRLL 637

Query: 183 IAGVLSKQHKMSKLLRENNP 242
           IA +LSK H  S+ + ++ P
Sbjct: 638 IAEILSKHHVASRPMIKSRP 657


>ref|XP_002529286.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531275|gb|EEF33118.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 672

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 48/78 (61%), Positives = 61/78 (78%), Gaps = 2/78 (2%)
 Frame = +3

Query: 3   SGHKMDQ--EVFCMAISRFIAEPEKKEXXXXXXHWMTGQGYVVDSSSRNLILKNSDMFGR 176
           SG+K+DQ  E+F MAISR+IA+PEKK+       WM G GYVVD+S+RNLILK+S +FGR
Sbjct: 593 SGYKIDQASELFQMAISRYIAQPEKKDLLVQLLQWMPGHGYVVDASTRNLILKSSHLFGR 652

Query: 177 HLIAGVLSKQHKMSKLLR 230
            LIA +LSKQH +SK L+
Sbjct: 653 QLIAEILSKQHIISKTLK 670