BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003967
         (740 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28904.3| unnamed protein product [Vitis vinifera]              222   6e-56
ref|XP_002277789.1| PREDICTED: thylakoid lumenal protein At1g036...   222   6e-56
ref|XP_002306756.1| predicted protein [Populus trichocarpa] gi|1...   219   6e-55
ref|XP_002512708.1| Photosystem II 11 kDa protein precursor, put...   216   3e-54
ref|XP_004136817.1| PREDICTED: thylakoid lumenal protein At1g036...   212   6e-53

>emb|CBI28904.3| unnamed protein product [Vitis vinifera]
          Length = 203

 Score =  222 bits (566), Expect = 6e-56
 Identities = 118/175 (67%), Positives = 136/175 (77%), Gaps = 1/175 (0%)
 Frame = +1

Query: 13  ASPTLLTPTSKPKSLVVTSFKXXXXXXXXXXXXXXXXXIPQTARRQFMVLTAGILTPALL 192
           ASPTL+TPT+KPK L +   K                  PQ  RR+ + +TAG+L+ ALL
Sbjct: 34  ASPTLITPTTKPKPLFLIKSKLPTTTTNAAPPPT-----PQPRRRELIAVTAGVLSHALL 88

Query: 193 LPVHT-VLAASDEEYVKETEEVIGKIRTTINMDKKDPNVAAAVSELREVSNAWVAKYRRE 369
           LPV    +AA+DEEYVKET +VI K+RTTINMDK DP+VA AV++LR+ SN+WVAKYRRE
Sbjct: 89  LPVAPQAVAANDEEYVKETADVINKVRTTINMDKTDPDVATAVADLRDASNSWVAKYRRE 148

Query: 370 KSLLGRASFRDMYSALNAVSGHYISFGPTAPIPAKRKVRILEEMDTAEKALLRGR 534
           K+LLGR SFRDMYSALNAVSGHYISFGPTAPIPAKRK RILEEMDTAEKALLRGR
Sbjct: 149 KALLGRPSFRDMYSALNAVSGHYISFGPTAPIPAKRKARILEEMDTAEKALLRGR 203


>ref|XP_002277789.1| PREDICTED: thylakoid lumenal protein At1g03610, chloroplastic-like
           [Vitis vinifera]
          Length = 171

 Score =  222 bits (566), Expect = 6e-56
 Identities = 118/175 (67%), Positives = 136/175 (77%), Gaps = 1/175 (0%)
 Frame = +1

Query: 13  ASPTLLTPTSKPKSLVVTSFKXXXXXXXXXXXXXXXXXIPQTARRQFMVLTAGILTPALL 192
           ASPTL+TPT+KPK L +   K                  PQ  RR+ + +TAG+L+ ALL
Sbjct: 2   ASPTLITPTTKPKPLFLIKSKLPTTTTNAAPPPT-----PQPRRRELIAVTAGVLSHALL 56

Query: 193 LPVHT-VLAASDEEYVKETEEVIGKIRTTINMDKKDPNVAAAVSELREVSNAWVAKYRRE 369
           LPV    +AA+DEEYVKET +VI K+RTTINMDK DP+VA AV++LR+ SN+WVAKYRRE
Sbjct: 57  LPVAPQAVAANDEEYVKETADVINKVRTTINMDKTDPDVATAVADLRDASNSWVAKYRRE 116

Query: 370 KSLLGRASFRDMYSALNAVSGHYISFGPTAPIPAKRKVRILEEMDTAEKALLRGR 534
           K+LLGR SFRDMYSALNAVSGHYISFGPTAPIPAKRK RILEEMDTAEKALLRGR
Sbjct: 117 KALLGRPSFRDMYSALNAVSGHYISFGPTAPIPAKRKARILEEMDTAEKALLRGR 171


>ref|XP_002306756.1| predicted protein [Populus trichocarpa] gi|118489928|gb|ABK96761.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222856205|gb|EEE93752.1| predicted protein [Populus
           trichocarpa]
          Length = 175

 Score =  219 bits (557), Expect = 6e-55
 Identities = 116/174 (66%), Positives = 129/174 (74%)
 Frame = +1

Query: 13  ASPTLLTPTSKPKSLVVTSFKXXXXXXXXXXXXXXXXXIPQTARRQFMVLTAGILTPALL 192
           ASPTLLTPTS+ K L     K                      RR F+ L   +LT  L+
Sbjct: 2   ASPTLLTPTSRLKPLSPIKPKPTPTTAFPPPTPPQQQIRNHLLRRHFLSLATAVLTSPLI 61

Query: 193 LPVHTVLAASDEEYVKETEEVIGKIRTTINMDKKDPNVAAAVSELREVSNAWVAKYRREK 372
           LPV    AASDEEYVK+TEEVIGK+RTT+NMDK DPNVA AV+ LRE SN+WVAKYRREK
Sbjct: 62  LPVTPAFAASDEEYVKDTEEVIGKVRTTMNMDKSDPNVADAVAVLRETSNSWVAKYRREK 121

Query: 373 SLLGRASFRDMYSALNAVSGHYISFGPTAPIPAKRKVRILEEMDTAEKALLRGR 534
           +LLGRASFRD+YSALNAV+GHYISFGPTAPIP+KRK RILEEMDTAEKALLRGR
Sbjct: 122 ALLGRASFRDIYSALNAVTGHYISFGPTAPIPSKRKARILEEMDTAEKALLRGR 175


>ref|XP_002512708.1| Photosystem II 11 kDa protein precursor, putative [Ricinus
           communis] gi|223548669|gb|EEF50160.1| Photosystem II 11
           kDa protein precursor, putative [Ricinus communis]
          Length = 173

 Score =  216 bits (551), Expect = 3e-54
 Identities = 120/175 (68%), Positives = 130/175 (74%), Gaps = 1/175 (0%)
 Frame = +1

Query: 13  ASPTLL-TPTSKPKSLVVTSFKXXXXXXXXXXXXXXXXXIPQTARRQFMVLTAGILTPAL 189
           ASPTLL TP SKP  L  T  K                   Q  RR F+ L  GIL PA 
Sbjct: 2   ASPTLLRTPGSKPTPLSATRSKAFIVATSSPLPPPAQQ---QPCRRNFLSLATGILIPAW 58

Query: 190 LLPVHTVLAASDEEYVKETEEVIGKIRTTINMDKKDPNVAAAVSELREVSNAWVAKYRRE 369
           ++PV   LAASDEEYVKET EVI KIR+TINM+K DPNVA AV+ELRE SN+WVAKYRRE
Sbjct: 59  VVPVVPALAASDEEYVKETGEVIDKIRSTINMEKNDPNVATAVAELRETSNSWVAKYRRE 118

Query: 370 KSLLGRASFRDMYSALNAVSGHYISFGPTAPIPAKRKVRILEEMDTAEKALLRGR 534
           K+LLGR SFRD+YSALNAVSGHYISFGPTAPIPAKRK RILEEMD+AEKALLRGR
Sbjct: 119 KTLLGRTSFRDIYSALNAVSGHYISFGPTAPIPAKRKARILEEMDSAEKALLRGR 173


>ref|XP_004136817.1| PREDICTED: thylakoid lumenal protein At1g03610, chloroplastic-like
           [Cucumis sativus] gi|449493075|ref|XP_004159186.1|
           PREDICTED: thylakoid lumenal protein At1g03610,
           chloroplastic-like [Cucumis sativus]
          Length = 169

 Score =  212 bits (540), Expect = 6e-53
 Identities = 116/176 (65%), Positives = 132/176 (75%), Gaps = 2/176 (1%)
 Frame = +1

Query: 13  ASPTLLTP-TSKPKSLVVTSFKXXXXXXXXXXXXXXXXXIPQTARRQFMVLTAGILTPAL 189
           ASPTL+TP TSK +S  +                      P   RR+F+ LTA +L P+ 
Sbjct: 2   ASPTLITPCTSKSQSPFIP--------LKPKSTISAAVTTPTVRRREFLSLTASVLAPSF 53

Query: 190 LL-PVHTVLAASDEEYVKETEEVIGKIRTTINMDKKDPNVAAAVSELREVSNAWVAKYRR 366
           +L P    LAASD+EYVK+T EVIGK+RTTI MD+ DPNVAAAV++LRE SN WVAKYR+
Sbjct: 54  VLFPQSPALAASDDEYVKDTNEVIGKVRTTITMDRNDPNVAAAVADLRESSNFWVAKYRK 113

Query: 367 EKSLLGRASFRDMYSALNAVSGHYISFGPTAPIPAKRKVRILEEMDTAEKALLRGR 534
           EK+LLGRASFRDMYSALNAVSGHYISFGPTAPIPAKRK RILEEMDTAEKALLRGR
Sbjct: 114 EKALLGRASFRDMYSALNAVSGHYISFGPTAPIPAKRKARILEEMDTAEKALLRGR 169