BLASTX nr result

ID: Cimicifuga21_contig00003951 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003951
         (1048 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310987.1| predicted protein [Populus trichocarpa] gi|2...    96   1e-17
ref|XP_002327345.1| predicted protein [Populus trichocarpa] gi|2...    86   2e-14
ref|XP_002333768.1| predicted protein [Populus trichocarpa] gi|2...    85   3e-14
ref|XP_002333910.1| predicted protein [Populus trichocarpa] gi|2...    79   2e-12
ref|XP_002333763.1| predicted protein [Populus trichocarpa] gi|2...    77   9e-12

>ref|XP_002310987.1| predicted protein [Populus trichocarpa] gi|222850807|gb|EEE88354.1|
           predicted protein [Populus trichocarpa]
          Length = 396

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 70/185 (37%), Positives = 92/185 (49%), Gaps = 16/185 (8%)
 Frame = +2

Query: 434 LCDDILVEILCRLP-RKDIARCKSVSKSWSRLISDICIPRIN--STVTGFFVLTN----- 589
           L DD+LVEILCR+  RK + R KSV KSW+ LI+D C+P+I+  S + GF  L       
Sbjct: 25  LPDDVLVEILCRVTDRKHLIRLKSVCKSWNNLITDACVPKISASSPLHGFIYLAKKIGFG 84

Query: 590 ---YDFVHLPTWVYSLPTESTYARYCSSLLPGMLDSHDMLACSNGCALFFHPPTLQFHVV 760
               D++         P    + +  SSLLP      D L C NG  LF    TLQ++V 
Sbjct: 85  KPYIDYIPCAITPAVAPEPHEFVKSYSSLLPFEPARGDFLDCCNGLLLFVEGCTLQYYVC 144

Query: 761 NPALKQCVAIPLPPPRTRNPRFLGKSAGFTFDDNLHTYYVVHLM-----RLPLRVYIYSS 925
           NPA K CVAIP       N  F    A   FD +   +Y V        R P+R+ ++SS
Sbjct: 145 NPATKHCVAIP-RDFMLENIIF----AALAFDPSTSPHYRVVCFDYSESRPPVRLQVFSS 199

Query: 926 FTQHW 940
            T +W
Sbjct: 200 ETGNW 204


>ref|XP_002327345.1| predicted protein [Populus trichocarpa] gi|222835715|gb|EEE74150.1|
            predicted protein [Populus trichocarpa]
          Length = 391

 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 75/239 (31%), Positives = 105/239 (43%), Gaps = 35/239 (14%)
 Frame = +2

Query: 434  LCDDILVEILCRLPRKDIARCKSVSKSWSRLISDICIPRINSTV----TGFFVLTNYDFV 601
            L DD++VEILCRLP K + R K VSK+W RLIS++C P  ++      +GF  L ++  +
Sbjct: 5    LPDDMIVEILCRLPVKVVMRLKVVSKAWHRLISNVCAPLFSAAAAAHPSGFLFLCSFQII 64

Query: 602  HLPTWVYSLPTESTYARY----------------CSSLLPGMLDSHDMLACSNGCALFFH 733
                    L   + YA Y                 + +LP ML S     C NG  LF  
Sbjct: 65   G------GLGYFAAYASYPDVRDCVGQTDGFVDSYACMLPFMLSSDHYFDCCNGLLLFVR 118

Query: 734  PPTLQ-----FHVVNPALKQCVAIPLPPPRTRNPRFLGKSAGFTFDDNLHTYY-VVHLMR 895
                +     + V N   +QCVAIP P PRT        +A   +D     +Y VV  + 
Sbjct: 119  REQREALPHYYFVCNTTTRQCVAIPNPRPRT-----APFAAAIAYDPAKSPHYKVVRFIY 173

Query: 896  L------PLRVYIYSSFTQHW---KVHTHLDLPLPILDKVSTVWSQDFVFLGRSFYKLS 1045
            L      P+++ I+SS T  W    V    +LPL   D       +  ++L    YKLS
Sbjct: 174  LEEKTSCPVKLDIFSSDTGKWVRRGVMLSTELPLAAADADKYGCIRRSIYLDGMIYKLS 232


>ref|XP_002333768.1| predicted protein [Populus trichocarpa] gi|222838455|gb|EEE76820.1|
           predicted protein [Populus trichocarpa]
          Length = 280

 Score = 84.7 bits (208), Expect = 3e-14
 Identities = 53/131 (40%), Positives = 69/131 (52%), Gaps = 11/131 (8%)
 Frame = +2

Query: 434 LCDDILVEILCRLPR-KDIARCKSVSKSWSRLISDICIPRIN--STVTGFFV-------- 580
           L DD+LVEILCR+   K + R KSV K W+ LI+D C+P+I+  S + GF          
Sbjct: 25  LPDDVLVEILCRVTDGKHLIRLKSVCKCWNNLITDACVPKISASSPLHGFIYHALRVSSR 84

Query: 581 LTNYDFVHLPTWVYSLPTESTYARYCSSLLPGMLDSHDMLACSNGCALFFHPPTLQFHVV 760
            T  D++         P    + +  SSLLP  L   D L C NG  LF   P  +++V 
Sbjct: 85  KTYIDYIPCAMTPAVAPEPHEFVKSYSSLLPFDLARGDFLDCCNGLLLFVEGPIPRYYVC 144

Query: 761 NPALKQCVAIP 793
           NP  KQCVAIP
Sbjct: 145 NPVTKQCVAIP 155


>ref|XP_002333910.1| predicted protein [Populus trichocarpa] gi|222838910|gb|EEE77261.1|
            predicted protein [Populus trichocarpa]
          Length = 391

 Score = 79.0 bits (193), Expect = 2e-12
 Identities = 73/239 (30%), Positives = 104/239 (43%), Gaps = 35/239 (14%)
 Frame = +2

Query: 434  LCDDILVEILCRLPRKDIARCKSVSKSWSRLISDICIPRINSTV----TGFFVLTNYDFV 601
            L D+I+VEIL +LP K + R K VSK+W RLIS++C P  ++      +GF  L ++  +
Sbjct: 5    LPDNIIVEILYQLPVKVVMRLKVVSKTWHRLISNVCAPLFSAAAAAHPSGFLFLCSFQII 64

Query: 602  HLPTWVYSLPTESTYARY----------------CSSLLPGMLDSHDMLACSNGCALFFH 733
                    L   + YA Y                 + +LP ML S     C NG  LF  
Sbjct: 65   G------GLGYFAAYASYPDVHDCVGQTDGFVDSYACMLPFMLSSDHYFDCCNGLLLFVR 118

Query: 734  PPTLQ-----FHVVNPALKQCVAIPLPPPRTRNPRFLGKSAGFTFDDNLHTYY-VVHLMR 895
                +     + V N   +QCVAIP P PRT        +A   +D     +Y VV  + 
Sbjct: 119  REQREDLPHYYFVCNTTTRQCVAIPNPRPRT-----APFAAAIAYDPAKSPHYKVVRFIY 173

Query: 896  L------PLRVYIYSSFTQHW---KVHTHLDLPLPILDKVSTVWSQDFVFLGRSFYKLS 1045
            L      P+++ I+SS T  W    V    +LPL   D       +  ++L    YKLS
Sbjct: 174  LEEKTSCPVKLDIFSSDTGKWVRRGVMLSTELPLAAADADKYGCIRRSIYLDGMIYKLS 232


>ref|XP_002333763.1| predicted protein [Populus trichocarpa] gi|222838450|gb|EEE76815.1|
           predicted protein [Populus trichocarpa]
          Length = 178

 Score = 76.6 bits (187), Expect = 9e-12
 Identities = 49/131 (37%), Positives = 68/131 (51%), Gaps = 11/131 (8%)
 Frame = +2

Query: 434 LCDDILVEILCRLP-RKDIARCKSVSKSWSRLISDICIPRIN--STVTGFFVL------- 583
           L DD+LVEILCR+  RK + R KSV K W+ LI+D C+ +++  S + GF  L       
Sbjct: 25  LPDDVLVEILCRVTDRKHLIRLKSVCKCWNNLITDTCVLKVSDSSHLHGFIYLALRVNSG 84

Query: 584 -TNYDFVHLPTWVYSLPTESTYARYCSSLLPGMLDSHDMLACSNGCALFFHPPTLQFHVV 760
            T  D++         P    + +  SSLLP  L   D L C N   LF   P  ++++ 
Sbjct: 85  KTYIDYIPCAMAPAVAPEPHKFIKSYSSLLPSDLARGDFLDCCNDLLLFVEGPIPRYYIC 144

Query: 761 NPALKQCVAIP 793
           NP  KQ +AIP
Sbjct: 145 NPVTKQRMAIP 155


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