BLASTX nr result

ID: Cimicifuga21_contig00003950 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003950
         (1848 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510983.1| conserved hypothetical protein [Ricinus comm...   131   5e-28
ref|XP_002310987.1| predicted protein [Populus trichocarpa] gi|2...   127   1e-26
ref|XP_002327345.1| predicted protein [Populus trichocarpa] gi|2...   112   3e-22
ref|XP_002333910.1| predicted protein [Populus trichocarpa] gi|2...   110   1e-21
ref|XP_002518195.1| conserved hypothetical protein [Ricinus comm...   102   4e-19

>ref|XP_002510983.1| conserved hypothetical protein [Ricinus communis]
            gi|223550098|gb|EEF51585.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 323

 Score =  131 bits (330), Expect = 5e-28
 Identities = 104/333 (31%), Positives = 173/333 (51%), Gaps = 14/333 (4%)
 Frame = +2

Query: 494  EEILVEILCRLPPKDIARYKSVSKSWSRLISDICIPRINSTVPGFFVLTNYNFEHLPTWV 673
            +++++EI+ +LP + +AR+K VSK+W   I D CIP++  ++     +++   EH   ++
Sbjct: 10   DDLMLEIVLKLPMRSLARFKCVSKTWHSRIQDFCIPKLLQSLQ--LQVSSIGREHHVHYI 67

Query: 674  YSLPGESTYARY-CSSLLPGTLDSHNMLACSNGCALLFHPPSFQFHVCNPTLKQCVAIPL 850
                 ++T   Y CS  LP  + + ++L C NG  LL+     ++ VCNP  KQ V++ L
Sbjct: 68   -----DNTRVLYSCSLFLPRPILACHLLDCCNGLLLLWVCDK-EYVVCNPVTKQYVSLKL 121

Query: 851  PPPRTRNPRYLGKSAGFTFDDNLHTYYIVHLM-RRPLRVYVYSSLTQLWK-VHTHFDLPL 1024
              PR +    L  +A   FD ++  +Y V L   R  R+ V+SS +  W  +       L
Sbjct: 122  LVPRNQVTGLL-INAALAFDPSISPHYKVVLFDSRNNRLLVFSSKSWSWNPLKYELQDVL 180

Query: 1025 SIFHKIATVWSQDFVFLGQSFYKLSSSGHLLKFGFK----SNDGATAIKLPQTVAVTRNY 1192
            SI       W ++ ++   + YKLS SGH++KF       ++D   AIKLP+     R Y
Sbjct: 181  SILR-----WDKESIYFCGAIYKLSKSGHVVKFSIDEEKVASDRVRAIKLPKYAPEMRCY 235

Query: 1193 IGSCGVSQSRLHYAWVDDHRQLMIWMLDEN-GD--DWIMKHTLFLQDLDKRVPFRQLLCF 1363
                GVS   LHYA VDD   L IW+L+ + GD  +W++K+T+  Q + K      +   
Sbjct: 236  ----GVSNGSLHYANVDD-GNLQIWVLNGSIGDECEWVLKYTVSCQTIGKDRGIYSVHP- 289

Query: 1364 CSFHPTSDALLVGHDS----SIFSYHPTTNTMD 1450
            C+ HP SD + +G D     +++ Y  +  T++
Sbjct: 290  CAIHPFSDIIFLGCDGGKYPNVYYYDFSNQTLE 322


>ref|XP_002310987.1| predicted protein [Populus trichocarpa] gi|222850807|gb|EEE88354.1|
            predicted protein [Populus trichocarpa]
          Length = 396

 Score =  127 bits (319), Expect = 1e-26
 Identities = 114/383 (29%), Positives = 175/383 (45%), Gaps = 31/383 (8%)
 Frame = +2

Query: 488  LCEEILVEILCRLPP-KDIARYKSVSKSWSRLISDICIPRINSTVP--GFFVLTNY---- 646
            L +++LVEILCR+   K + R KSV KSW+ LI+D C+P+I+++ P  GF  L       
Sbjct: 25   LPDDVLVEILCRVTDRKHLIRLKSVCKSWNNLITDACVPKISASSPLHGFIYLAKKIGFG 84

Query: 647  --NFEHLPTWVYSL--PGESTYARYCSSLLPGTLDSHNMLACSNGCALLFHPPSFQFHVC 814
                +++P  +     P    + +  SSLLP      + L C NG  L     + Q++VC
Sbjct: 85   KPYIDYIPCAITPAVAPEPHEFVKSYSSLLPFEPARGDFLDCCNGLLLFVEGCTLQYYVC 144

Query: 815  NPTLKQCVAIPLPPPRTRNPRYLGKSAGFTFDDNLHTYYIVHLM-----RRPLRVYVYSS 979
            NP  K CVAIP       N  +    A   FD +   +Y V        R P+R+ V+SS
Sbjct: 145  NPATKHCVAIP-RDFMLENIIF----AALAFDPSTSPHYRVVCFDYSESRPPVRLQVFSS 199

Query: 980  LTQLWKVHTHFDLPLSIFHKIATVWSQDFVFLGQSFYKLSSSGHLLKFGFKSNDGATAIK 1159
             T  W   T  + P    +K   V  +  ++L  + Y +S+S H++ F   +   + AI+
Sbjct: 200  ETGNW---TGNETPFGYSNKKCKV-VKHCIYLDGALYCISTSKHIICFDL-NRGNSRAIE 254

Query: 1160 LPQTVAVTRNYIGSCGVSQSRLHYAWVD-DHRQLMIWMLDE--NGDDWIMKHTLFLQDLD 1330
            LP+   +  N  GS  V Q R H  + D        W+L++    D W + H + +  L 
Sbjct: 255  LPEKERLDPN--GSGCVGQWRGHLCYTDLVGTAFYFWLLEDRCKNDRWTLVHNINVDYLG 312

Query: 1331 KR----------VPFRQLLCFCSF--HPTSDALLVGHDSSIFSYHPTTNTMDHIFEVRNY 1474
            K             F ++  F  F  HPTSD +  G    + SYH     +  I+  +  
Sbjct: 313  KLWLQRDSMITIGRFGKISSFRPFALHPTSDVIFFGTPGVMLSYHLEDKRLKLIYRTKKD 372

Query: 1475 FTICRDQLFIFPFSHNLVSLDGF 1543
              I   QL +FP++  LV+L  F
Sbjct: 373  RLILMGQLMVFPYTPCLVNLKDF 395


>ref|XP_002327345.1| predicted protein [Populus trichocarpa] gi|222835715|gb|EEE74150.1|
            predicted protein [Populus trichocarpa]
          Length = 391

 Score =  112 bits (280), Expect = 3e-22
 Identities = 107/400 (26%), Positives = 176/400 (44%), Gaps = 45/400 (11%)
 Frame = +2

Query: 488  LCEEILVEILCRLPPKDIARYKSVSKSWSRLISDICIPRINSTV----PGFFVLTNYNFE 655
            L ++++VEILCRLP K + R K VSK+W RLIS++C P  ++       GF  L ++   
Sbjct: 5    LPDDMIVEILCRLPVKVVMRLKVVSKAWHRLISNVCAPLFSAAAAAHPSGFLFLCSFQI- 63

Query: 656  HLPTWVYSLPGESTYARY----------------CSSLLPGTLDSHNMLACSNGCALLFH 787
                 +  L   + YA Y                 + +LP  L S +   C NG  L   
Sbjct: 64   -----IGGLGYFAAYASYPDVRDCVGQTDGFVDSYACMLPFMLSSDHYFDCCNGLLLFVR 118

Query: 788  P------PSFQFHVCNPTLKQCVAIPLPPPRTRNPRYLGKSAGFTFDDNLHTYY----IV 937
                   P + F VCN T +QCVAIP P PRT        +A   +D     +Y     +
Sbjct: 119  REQREALPHYYF-VCNTTTRQCVAIPNPRPRT-----APFAAAIAYDPAKSPHYKVVRFI 172

Query: 938  HLMRR---PLRVYVYSSLTQLW---KVHTHFDLPLSIFHKIATVWSQDFVFLGQSFYKLS 1099
            +L  +   P+++ ++SS T  W    V    +LPL+          +  ++L    YKLS
Sbjct: 173  YLEEKTSCPVKLDIFSSDTGKWVRRGVMLSTELPLAAADADKYGCIRRSIYLDGMIYKLS 232

Query: 1100 -SSGHLLKFGFKSNDGATAIKLPQTVAVTRNYIGSCGVSQSRLHYAWVDDH-RQLMIWML 1273
                +L++F   +     AI+LP   A   +  G  G+S+  L+Y+  D+    + IW+L
Sbjct: 233  FVVNYLIRFDLNA-PSDVAIELPHKNAAACH--GFIGMSRGSLYYSNHDESGLMISIWLL 289

Query: 1274 DE---NGDDWIMKHTLFLQDLDKRVPFRQLLCF----CSFHPTSDALLVGHDSSIFSYHP 1432
            ++       W + H + +  L  + P  +   F     + HP SD + +G  + + SY  
Sbjct: 290  EDRCKRDPFWKLTHRISVDSLTSKYPDGRNSGFHFHTYAIHPASDIIFLGKPNMVLSYDL 349

Query: 1433 TTNTMDHIFEVRNYFTICRDQLFIFPFSHNLVSLDGFSSS 1552
             +N  + +F + +   I   Q F+  +S     L  F ++
Sbjct: 350  KSNKSEEVFTLSSGLEISSGQHFVHLYSPCYAVLSNFDNN 389


>ref|XP_002333910.1| predicted protein [Populus trichocarpa] gi|222838910|gb|EEE77261.1|
            predicted protein [Populus trichocarpa]
          Length = 391

 Score =  110 bits (275), Expect = 1e-21
 Identities = 106/395 (26%), Positives = 177/395 (44%), Gaps = 40/395 (10%)
 Frame = +2

Query: 488  LCEEILVEILCRLPPKDIARYKSVSKSWSRLISDICIPRINSTV----PGFFVLTNYN-- 649
            L + I+VEIL +LP K + R K VSK+W RLIS++C P  ++       GF  L ++   
Sbjct: 5    LPDNIIVEILYQLPVKVVMRLKVVSKTWHRLISNVCAPLFSAAAAAHPSGFLFLCSFQII 64

Query: 650  --------FEHLPTWVYSLPGEST-YARYCSSLLPGTLDSHNMLACSNGCALLFHP---- 790
                    +   P  V+   G++  +    + +LP  L S +   C NG  L        
Sbjct: 65   GGLGYFAAYASYPD-VHDCVGQTDGFVDSYACMLPFMLSSDHYFDCCNGLLLFVRREQRE 123

Query: 791  --PSFQFHVCNPTLKQCVAIPLPPPRTRNPRYLGKSAGFTFDDNLHTYY----IVHLMRR 952
              P + F VCN T +QCVAIP P PRT        +A   +D     +Y     ++L  +
Sbjct: 124  DLPHYYF-VCNTTTRQCVAIPNPRPRT-----APFAAAIAYDPAKSPHYKVVRFIYLEEK 177

Query: 953  ---PLRVYVYSSLTQLW---KVHTHFDLPLSIFHKIATVWSQDFVFLGQSFYKLS-SSGH 1111
               P+++ ++SS T  W    V    +LPL+          +  ++L    YKLS    +
Sbjct: 178  TSCPVKLDIFSSDTGKWVRRGVMLSTELPLAAADADKYGCIRRSIYLDGMIYKLSFVVNY 237

Query: 1112 LLKFGFKSNDGATAIKLPQTVAVTRNYIGSCGVSQSRLHYAWVDDH-RQLMIWMLDE--- 1279
            L++F   +     AI+LP   A  R+  G  G+S+  L+Y+  D+    + IW+L++   
Sbjct: 238  LIRFDLNA-PSDVAIELPHKNAADRH--GFIGMSRGSLYYSNQDESGLMISIWLLEDRCK 294

Query: 1280 NGDDWIMKHTLFLQDLDKRVPFRQLLCF----CSFHPTSDALLVGHDSSIFSYHPTTNTM 1447
                W + H + +  L  + P  +   F     + HP SD + +G  + + SY   +N  
Sbjct: 295  RDPFWKLTHRISVDSLTSKYPDVRNSGFHFHTYAIHPASDIIFLGKPNMVLSYDHKSNKS 354

Query: 1448 DHIFEVRNYFTICRDQLFIFPFSHNLVSLDGFSSS 1552
            + +F + +   I   Q F+  +S     L  F ++
Sbjct: 355  EEVFTLSSGLEISSGQHFVHLYSPCYAVLSNFDNN 389


>ref|XP_002518195.1| conserved hypothetical protein [Ricinus communis]
            gi|223542791|gb|EEF44328.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 379

 Score =  102 bits (253), Expect = 4e-19
 Identities = 99/340 (29%), Positives = 153/340 (45%), Gaps = 21/340 (6%)
 Frame = +2

Query: 494  EEILVEILCRLPPKDIARYKSVSKSWSRLISDICIPRINSTVPGF-FVLTNYNFEHLPTW 670
            ++I+++IL + P + +AR+K VSK W R I + CIP+I          + +     +   
Sbjct: 18   DDIMLKILYKQPLESLARFKCVSKLWKRRIEEFCIPKILKAHEHVQLQVKSLRRRTMQHH 77

Query: 671  VYSLPGESTYARYCSSLLPGTLDSHNMLACSNGCALLFHPPSFQFHVCNPTLKQCVAIPL 850
            V+ +       + CSS+L   +   N+  C NG  LL     + + VCNP  KQ   IP 
Sbjct: 78   VHYIDNRQVLYKNCSSMLQEDIFPRNLADCCNGLLLL--RTMYNYVVCNPVTKQYALIPS 135

Query: 851  PPPRTRNPRYLGKSAGFTFDDNLHTYYIVHLMRRPLRVYVYSSLTQLWKVHTHFDLPLSI 1030
             P       Y   +A   FD  +  ++ +   + P  + V+SS +  WK      L L  
Sbjct: 136  DPQEW--GIYDLINAALAFDPCISPHFRILSFQNPNHLLVFSSKSWKWK-----PLKLKF 188

Query: 1031 FHKIATVWSQDFVFLGQSFYKLSSSGHLLKFGFKSNDGA---TAIKLPQT--VAVTRNYI 1195
             +   T+ S   V+  Q+ YKL     ++KF    +D +     IKLP T  + V R Y 
Sbjct: 189  TYYSTTIKS---VYFNQAIYKLYKE-LMVKFLIDDDDESDRVRIIKLPTTYNLEVKRCY- 243

Query: 1196 GSCGVSQSRLHYAWVD-DHRQLMIWMLDENGD------DWIMKHTLFLQDLDKRVPFRQL 1354
               GVS   L+YA V    R L IW L  NGD      +W++KH +  Q +        L
Sbjct: 244  ---GVSDGSLYYANVGYPDRTLEIWTL--NGDIGDEQCEWMLKHRISCQTIGGDA---SL 295

Query: 1355 LCF--CSFHPTSDALL------VGHDSSIFSYHPTTNTMD 1450
              F  C+FHP SD ++      +G   +I+ Y  T  T++
Sbjct: 296  YSFHPCAFHPFSDNVIFLGCNGIGKYPNIYCYDFTKKTLE 335


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