BLASTX nr result

ID: Cimicifuga21_contig00003948 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003948
         (526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281739.1| PREDICTED: 50S ribosomal protein L17 [Vitis ...   251   4e-65
ref|XP_002307023.1| predicted protein [Populus trichocarpa] gi|2...   251   6e-65
ref|XP_002310514.1| predicted protein [Populus trichocarpa] gi|2...   249   2e-64
ref|XP_002517236.1| ribosomal protein L17, putative [Ricinus com...   246   1e-63
ref|XP_002873421.1| ribosomal protein L17 family protein [Arabid...   240   8e-62

>ref|XP_002281739.1| PREDICTED: 50S ribosomal protein L17 [Vitis vinifera]
           gi|296088573|emb|CBI37564.3| unnamed protein product
           [Vitis vinifera]
          Length = 160

 Score =  251 bits (642), Expect = 4e-65
 Identities = 129/153 (84%), Positives = 134/153 (87%)
 Frame = -2

Query: 459 MTKMRKLNRPTGHRLSMLRTMVSQLVKHERIETTLAKAKEIRCLADNMVQLGKEGTLCAA 280
           MTK RKL RPTGHR+SMLRTMVSQLVKHERIETT+AKAKEIR LADNMVQLGKEG+LCAA
Sbjct: 1   MTKFRKLGRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEIRRLADNMVQLGKEGSLCAA 60

Query: 279 RRAAAFVRGDAVIHKLFTEMAYRYKDRAGGYTRLLRTRIRVGDAAPMAYIEFVDRENELR 100
           RRAAAFVRGD VIHKLFTE+AYRYKDRAGGYTRLLRTRIRVGDAAPMAYIEF+DRENELR
Sbjct: 61  RRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRTRIRVGDAAPMAYIEFIDRENELR 120

Query: 99  QSKXXXXXXXXXXXXXPWTRSRLTKQMAPPKED 1
           QSK             PWTRSRL KQ APPKED
Sbjct: 121 QSKPATPQPPQRVPLDPWTRSRLCKQFAPPKED 153


>ref|XP_002307023.1| predicted protein [Populus trichocarpa] gi|222856472|gb|EEE94019.1|
           predicted protein [Populus trichocarpa]
          Length = 160

 Score =  251 bits (640), Expect = 6e-65
 Identities = 126/153 (82%), Positives = 136/153 (88%)
 Frame = -2

Query: 459 MTKMRKLNRPTGHRLSMLRTMVSQLVKHERIETTLAKAKEIRCLADNMVQLGKEGTLCAA 280
           MTK RKLNRPTGHR+SMLRT+VSQL+KHERIETT+AKAKEIR LADNMVQLGKEG+LCAA
Sbjct: 1   MTKFRKLNRPTGHRMSMLRTLVSQLIKHERIETTVAKAKEIRRLADNMVQLGKEGSLCAA 60

Query: 279 RRAAAFVRGDAVIHKLFTEMAYRYKDRAGGYTRLLRTRIRVGDAAPMAYIEFVDRENELR 100
           RRAAAFVRGD VIHKLF+EMAYRYKDRAGGYTR+LRTRIRVGDAAPMAYIEF+DRENELR
Sbjct: 61  RRAAAFVRGDDVIHKLFSEMAYRYKDRAGGYTRMLRTRIRVGDAAPMAYIEFIDRENELR 120

Query: 99  QSKXXXXXXXXXXXXXPWTRSRLTKQMAPPKED 1
           QSK             PWTRSRLT+Q APPKE+
Sbjct: 121 QSKPPTPQPPQRAPLDPWTRSRLTRQFAPPKEE 153


>ref|XP_002310514.1| predicted protein [Populus trichocarpa] gi|222853417|gb|EEE90964.1|
           predicted protein [Populus trichocarpa]
          Length = 160

 Score =  249 bits (636), Expect = 2e-64
 Identities = 125/153 (81%), Positives = 136/153 (88%)
 Frame = -2

Query: 459 MTKMRKLNRPTGHRLSMLRTMVSQLVKHERIETTLAKAKEIRCLADNMVQLGKEGTLCAA 280
           MTK RKLNRPTGHR+SMLRTMVSQL+KHERIETT+AKAKEIR LADNMVQLGKEG+LCA+
Sbjct: 1   MTKFRKLNRPTGHRMSMLRTMVSQLIKHERIETTVAKAKEIRRLADNMVQLGKEGSLCAS 60

Query: 279 RRAAAFVRGDAVIHKLFTEMAYRYKDRAGGYTRLLRTRIRVGDAAPMAYIEFVDRENELR 100
           RRAAAFVRGD VIHKLF+E+AYRYKDRAGGYTR+LRTRIRVGDAAPMAYIEF+DRENELR
Sbjct: 61  RRAAAFVRGDDVIHKLFSELAYRYKDRAGGYTRMLRTRIRVGDAAPMAYIEFIDRENELR 120

Query: 99  QSKXXXXXXXXXXXXXPWTRSRLTKQMAPPKED 1
           QSK             PWTRSRLT+Q APPKE+
Sbjct: 121 QSKPPTPQPPQRAPMDPWTRSRLTRQCAPPKEE 153


>ref|XP_002517236.1| ribosomal protein L17, putative [Ricinus communis]
           gi|223543607|gb|EEF45136.1| ribosomal protein L17,
           putative [Ricinus communis]
          Length = 160

 Score =  246 bits (628), Expect = 1e-63
 Identities = 124/153 (81%), Positives = 135/153 (88%)
 Frame = -2

Query: 459 MTKMRKLNRPTGHRLSMLRTMVSQLVKHERIETTLAKAKEIRCLADNMVQLGKEGTLCAA 280
           MTK RKL+RPTGHR+S+LRTMVSQLVKHERIETT+AKAKEIR LADNMVQLGKEG+LCAA
Sbjct: 1   MTKFRKLSRPTGHRMSLLRTMVSQLVKHERIETTIAKAKEIRRLADNMVQLGKEGSLCAA 60

Query: 279 RRAAAFVRGDAVIHKLFTEMAYRYKDRAGGYTRLLRTRIRVGDAAPMAYIEFVDRENELR 100
           RRAAAFVRGD V+HKLFTE+AYRYKDR GGYTRLLRTRIRVGDAAPMAYIEF+DRENELR
Sbjct: 61  RRAAAFVRGDDVLHKLFTELAYRYKDREGGYTRLLRTRIRVGDAAPMAYIEFIDRENELR 120

Query: 99  QSKXXXXXXXXXXXXXPWTRSRLTKQMAPPKED 1
           +SK             PWTRSRL+KQ APPKE+
Sbjct: 121 KSKPPTPQPPQRDPLDPWTRSRLSKQFAPPKEE 153


>ref|XP_002873421.1| ribosomal protein L17 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297319258|gb|EFH49680.1| ribosomal protein
           L17 family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 160

 Score =  240 bits (613), Expect = 8e-62
 Identities = 121/153 (79%), Positives = 130/153 (84%)
 Frame = -2

Query: 459 MTKMRKLNRPTGHRLSMLRTMVSQLVKHERIETTLAKAKEIRCLADNMVQLGKEGTLCAA 280
           MTK RKL RP GHR+SMLRTMVSQLVKHERIETT+ KAKE+R LADNMVQLGKEGTL AA
Sbjct: 1   MTKFRKLGRPAGHRMSMLRTMVSQLVKHERIETTVTKAKEVRRLADNMVQLGKEGTLAAA 60

Query: 279 RRAAAFVRGDAVIHKLFTEMAYRYKDRAGGYTRLLRTRIRVGDAAPMAYIEFVDRENELR 100
           RRAA FVRGD V+HK+FTE+AYRYKDRAGGYTR+LRTRIRVGDAAPMAYIEF+DRENELR
Sbjct: 61  RRAAGFVRGDDVLHKIFTELAYRYKDRAGGYTRMLRTRIRVGDAAPMAYIEFIDRENELR 120

Query: 99  QSKXXXXXXXXXXXXXPWTRSRLTKQMAPPKED 1
           QSK             PW RSRLTKQ APPKE+
Sbjct: 121 QSKPATPQPPQRVPLDPWERSRLTKQFAPPKEE 153


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