BLASTX nr result
ID: Cimicifuga21_contig00003948
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00003948 (526 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002281739.1| PREDICTED: 50S ribosomal protein L17 [Vitis ... 251 4e-65 ref|XP_002307023.1| predicted protein [Populus trichocarpa] gi|2... 251 6e-65 ref|XP_002310514.1| predicted protein [Populus trichocarpa] gi|2... 249 2e-64 ref|XP_002517236.1| ribosomal protein L17, putative [Ricinus com... 246 1e-63 ref|XP_002873421.1| ribosomal protein L17 family protein [Arabid... 240 8e-62 >ref|XP_002281739.1| PREDICTED: 50S ribosomal protein L17 [Vitis vinifera] gi|296088573|emb|CBI37564.3| unnamed protein product [Vitis vinifera] Length = 160 Score = 251 bits (642), Expect = 4e-65 Identities = 129/153 (84%), Positives = 134/153 (87%) Frame = -2 Query: 459 MTKMRKLNRPTGHRLSMLRTMVSQLVKHERIETTLAKAKEIRCLADNMVQLGKEGTLCAA 280 MTK RKL RPTGHR+SMLRTMVSQLVKHERIETT+AKAKEIR LADNMVQLGKEG+LCAA Sbjct: 1 MTKFRKLGRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEIRRLADNMVQLGKEGSLCAA 60 Query: 279 RRAAAFVRGDAVIHKLFTEMAYRYKDRAGGYTRLLRTRIRVGDAAPMAYIEFVDRENELR 100 RRAAAFVRGD VIHKLFTE+AYRYKDRAGGYTRLLRTRIRVGDAAPMAYIEF+DRENELR Sbjct: 61 RRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRTRIRVGDAAPMAYIEFIDRENELR 120 Query: 99 QSKXXXXXXXXXXXXXPWTRSRLTKQMAPPKED 1 QSK PWTRSRL KQ APPKED Sbjct: 121 QSKPATPQPPQRVPLDPWTRSRLCKQFAPPKED 153 >ref|XP_002307023.1| predicted protein [Populus trichocarpa] gi|222856472|gb|EEE94019.1| predicted protein [Populus trichocarpa] Length = 160 Score = 251 bits (640), Expect = 6e-65 Identities = 126/153 (82%), Positives = 136/153 (88%) Frame = -2 Query: 459 MTKMRKLNRPTGHRLSMLRTMVSQLVKHERIETTLAKAKEIRCLADNMVQLGKEGTLCAA 280 MTK RKLNRPTGHR+SMLRT+VSQL+KHERIETT+AKAKEIR LADNMVQLGKEG+LCAA Sbjct: 1 MTKFRKLNRPTGHRMSMLRTLVSQLIKHERIETTVAKAKEIRRLADNMVQLGKEGSLCAA 60 Query: 279 RRAAAFVRGDAVIHKLFTEMAYRYKDRAGGYTRLLRTRIRVGDAAPMAYIEFVDRENELR 100 RRAAAFVRGD VIHKLF+EMAYRYKDRAGGYTR+LRTRIRVGDAAPMAYIEF+DRENELR Sbjct: 61 RRAAAFVRGDDVIHKLFSEMAYRYKDRAGGYTRMLRTRIRVGDAAPMAYIEFIDRENELR 120 Query: 99 QSKXXXXXXXXXXXXXPWTRSRLTKQMAPPKED 1 QSK PWTRSRLT+Q APPKE+ Sbjct: 121 QSKPPTPQPPQRAPLDPWTRSRLTRQFAPPKEE 153 >ref|XP_002310514.1| predicted protein [Populus trichocarpa] gi|222853417|gb|EEE90964.1| predicted protein [Populus trichocarpa] Length = 160 Score = 249 bits (636), Expect = 2e-64 Identities = 125/153 (81%), Positives = 136/153 (88%) Frame = -2 Query: 459 MTKMRKLNRPTGHRLSMLRTMVSQLVKHERIETTLAKAKEIRCLADNMVQLGKEGTLCAA 280 MTK RKLNRPTGHR+SMLRTMVSQL+KHERIETT+AKAKEIR LADNMVQLGKEG+LCA+ Sbjct: 1 MTKFRKLNRPTGHRMSMLRTMVSQLIKHERIETTVAKAKEIRRLADNMVQLGKEGSLCAS 60 Query: 279 RRAAAFVRGDAVIHKLFTEMAYRYKDRAGGYTRLLRTRIRVGDAAPMAYIEFVDRENELR 100 RRAAAFVRGD VIHKLF+E+AYRYKDRAGGYTR+LRTRIRVGDAAPMAYIEF+DRENELR Sbjct: 61 RRAAAFVRGDDVIHKLFSELAYRYKDRAGGYTRMLRTRIRVGDAAPMAYIEFIDRENELR 120 Query: 99 QSKXXXXXXXXXXXXXPWTRSRLTKQMAPPKED 1 QSK PWTRSRLT+Q APPKE+ Sbjct: 121 QSKPPTPQPPQRAPMDPWTRSRLTRQCAPPKEE 153 >ref|XP_002517236.1| ribosomal protein L17, putative [Ricinus communis] gi|223543607|gb|EEF45136.1| ribosomal protein L17, putative [Ricinus communis] Length = 160 Score = 246 bits (628), Expect = 1e-63 Identities = 124/153 (81%), Positives = 135/153 (88%) Frame = -2 Query: 459 MTKMRKLNRPTGHRLSMLRTMVSQLVKHERIETTLAKAKEIRCLADNMVQLGKEGTLCAA 280 MTK RKL+RPTGHR+S+LRTMVSQLVKHERIETT+AKAKEIR LADNMVQLGKEG+LCAA Sbjct: 1 MTKFRKLSRPTGHRMSLLRTMVSQLVKHERIETTIAKAKEIRRLADNMVQLGKEGSLCAA 60 Query: 279 RRAAAFVRGDAVIHKLFTEMAYRYKDRAGGYTRLLRTRIRVGDAAPMAYIEFVDRENELR 100 RRAAAFVRGD V+HKLFTE+AYRYKDR GGYTRLLRTRIRVGDAAPMAYIEF+DRENELR Sbjct: 61 RRAAAFVRGDDVLHKLFTELAYRYKDREGGYTRLLRTRIRVGDAAPMAYIEFIDRENELR 120 Query: 99 QSKXXXXXXXXXXXXXPWTRSRLTKQMAPPKED 1 +SK PWTRSRL+KQ APPKE+ Sbjct: 121 KSKPPTPQPPQRDPLDPWTRSRLSKQFAPPKEE 153 >ref|XP_002873421.1| ribosomal protein L17 family protein [Arabidopsis lyrata subsp. lyrata] gi|297319258|gb|EFH49680.1| ribosomal protein L17 family protein [Arabidopsis lyrata subsp. lyrata] Length = 160 Score = 240 bits (613), Expect = 8e-62 Identities = 121/153 (79%), Positives = 130/153 (84%) Frame = -2 Query: 459 MTKMRKLNRPTGHRLSMLRTMVSQLVKHERIETTLAKAKEIRCLADNMVQLGKEGTLCAA 280 MTK RKL RP GHR+SMLRTMVSQLVKHERIETT+ KAKE+R LADNMVQLGKEGTL AA Sbjct: 1 MTKFRKLGRPAGHRMSMLRTMVSQLVKHERIETTVTKAKEVRRLADNMVQLGKEGTLAAA 60 Query: 279 RRAAAFVRGDAVIHKLFTEMAYRYKDRAGGYTRLLRTRIRVGDAAPMAYIEFVDRENELR 100 RRAA FVRGD V+HK+FTE+AYRYKDRAGGYTR+LRTRIRVGDAAPMAYIEF+DRENELR Sbjct: 61 RRAAGFVRGDDVLHKIFTELAYRYKDRAGGYTRMLRTRIRVGDAAPMAYIEFIDRENELR 120 Query: 99 QSKXXXXXXXXXXXXXPWTRSRLTKQMAPPKED 1 QSK PW RSRLTKQ APPKE+ Sbjct: 121 QSKPATPQPPQRVPLDPWERSRLTKQFAPPKEE 153