BLASTX nr result

ID: Cimicifuga21_contig00003942 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003942
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598445.1| Cc-nbs resistance protein [Medicago truncatu...    55   8e-06

>ref|XP_003598445.1| Cc-nbs resistance protein [Medicago truncatula]
            gi|355487493|gb|AES68696.1| Cc-nbs resistance protein
            [Medicago truncatula]
          Length = 1280

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
 Frame = +1

Query: 10   PPKIAVFPNLQGLQIKGCNL-KSLFSFGMARHLQQLNRLDVEYCNYLEVIIAKXXXXXAM 186
            P     F  LQ +++K C+L +S+F   M +HL +L  +++  C Y+  IIAK       
Sbjct: 818  PLPAEAFAKLQVIKVKNCDLMESVFLHSMVQHLTELVEIEISECRYMNYIIAKKIQENEG 877

Query: 187  DHDGCFLPKLQSLRMFYLPNLRSI 258
            + D   LPKL+SL +  LP+L S+
Sbjct: 878  EDDKIALPKLRSLTLESLPSLVSL 901


Top