BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003923
         (1260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281655.1| PREDICTED: NADH dehydrogenase [ubiquinone] f...   439   e-121
ref|XP_004152180.1| PREDICTED: NADH dehydrogenase [ubiquinone] f...   434   e-119
ref|XP_002520977.1| NADH-ubiquinone oxidoreductase 24 kD subunit...   434   e-119
ref|XP_002307624.1| predicted protein [Populus trichocarpa] gi|2...   430   e-118
ref|XP_004164329.1| PREDICTED: NADH dehydrogenase [ubiquinone] f...   429   e-117

>ref|XP_002281655.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 2,
            mitochondrial [Vitis vinifera]
            gi|297735489|emb|CBI17929.3| unnamed protein product
            [Vitis vinifera]
          Length = 254

 Score =  439 bits (1128), Expect = e-121
 Identities = 211/252 (83%), Positives = 229/252 (90%), Gaps = 3/252 (1%)
 Frame = -3

Query: 1162 ARLASKR---IRQLLRQPLQTSRSLSTALNYHIDSPDNSTDVPWEFSEKNKEKAKEILSH 992
            ARLA+KR   +RQ+ RQ  QTSRS STALNYH+DSPDN+ ++PWEF++ NK K KEILSH
Sbjct: 3    ARLATKRLLEVRQIFRQNHQTSRSFSTALNYHLDSPDNNPNIPWEFNDANKGKVKEILSH 62

Query: 991  YPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNAVAKVIEVAPIRVYEVATFYSMFNRAKVG 812
            YPSNYKQSAVIPLLDLAQQQHGGWLPVSAM+AVAKV+EVAPIRVYEVATFYSMFNRAKVG
Sbjct: 63   YPSNYKQSAVIPLLDLAQQQHGGWLPVSAMDAVAKVVEVAPIRVYEVATFYSMFNRAKVG 122

Query: 811  KYHLMVCGTTPCMIRGSREIEDALLQHLGVKRNEVTKDGMFSVGEMECMGSCVNAPMIAV 632
            KYHL+VCGTTPCMIRGSREIEDALL+HLGVKRNEVTKDG+FSVGEMECMG CVNAPMI V
Sbjct: 123  KYHLLVCGTTPCMIRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITV 182

Query: 631  ADYSTGSEGYTYNYYEDLTPKRVVEIVELFRKGEIPPVGTQNKMRIMSGPEGGNTTLLSD 452
            ADYSTGSEGYTYNYYED+TPKRVVEIVE+ R+GE PP GTQN  R   GPEGGNTTLL +
Sbjct: 183  ADYSTGSEGYTYNYYEDVTPKRVVEIVEMLRRGEKPPHGTQNPQRTRCGPEGGNTTLLGE 242

Query: 451  PKPPPCRDLDAC 416
            PK PPCRDLDAC
Sbjct: 243  PKAPPCRDLDAC 254


>ref|XP_004152180.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 2,
            mitochondrial-like [Cucumis sativus]
          Length = 251

 Score =  434 bits (1117), Expect = e-119
 Identities = 208/249 (83%), Positives = 224/249 (89%)
 Frame = -3

Query: 1162 ARLASKRIRQLLRQPLQTSRSLSTALNYHIDSPDNSTDVPWEFSEKNKEKAKEILSHYPS 983
            ARLA+ R+  + +   QTSR  STA NYH+DSPDN+ D+ WEFSE NK+K  EILSHYPS
Sbjct: 3    ARLAANRLAGIRQSVRQTSRCFSTAFNYHVDSPDNNPDLTWEFSETNKKKIAEILSHYPS 62

Query: 982  NYKQSAVIPLLDLAQQQHGGWLPVSAMNAVAKVIEVAPIRVYEVATFYSMFNRAKVGKYH 803
            NYKQSAVIPLLDLAQQQHGGWLPVSAMNAVAKV+EVAPIRVYEVATFYSMFNRAKVGKYH
Sbjct: 63   NYKQSAVIPLLDLAQQQHGGWLPVSAMNAVAKVVEVAPIRVYEVATFYSMFNRAKVGKYH 122

Query: 802  LMVCGTTPCMIRGSREIEDALLQHLGVKRNEVTKDGMFSVGEMECMGSCVNAPMIAVADY 623
            L+VCGTTPCMIRGSREIEDALL+HLGVKRNEVTKDG+FSVGEMECMG CVNAPMI VADY
Sbjct: 123  LLVCGTTPCMIRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVADY 182

Query: 622  STGSEGYTYNYYEDLTPKRVVEIVELFRKGEIPPVGTQNKMRIMSGPEGGNTTLLSDPKP 443
            S GSEGYTYNYYED+TPKRVVEIVE+ R+GE PP GTQN  RI  GPEGGNTTL+SDPKP
Sbjct: 183  SNGSEGYTYNYYEDVTPKRVVEIVEMLRRGEKPPHGTQNPGRIRCGPEGGNTTLVSDPKP 242

Query: 442  PPCRDLDAC 416
            PPCRDLDAC
Sbjct: 243  PPCRDLDAC 251


>ref|XP_002520977.1| NADH-ubiquinone oxidoreductase 24 kD subunit, putative [Ricinus
            communis] gi|223539814|gb|EEF41394.1| NADH-ubiquinone
            oxidoreductase 24 kD subunit, putative [Ricinus communis]
          Length = 255

 Score =  434 bits (1115), Expect = e-119
 Identities = 209/253 (82%), Positives = 228/253 (90%), Gaps = 4/253 (1%)
 Frame = -3

Query: 1162 ARLASKRIRQLLR----QPLQTSRSLSTALNYHIDSPDNSTDVPWEFSEKNKEKAKEILS 995
            ARLA+ R+R++ +       Q SRS STALNYHIDSPDN+ ++PWEFSEKNKEK KEI+S
Sbjct: 3    ARLAATRLREIRQVFGQSSQQISRSFSTALNYHIDSPDNNPNIPWEFSEKNKEKVKEIIS 62

Query: 994  HYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNAVAKVIEVAPIRVYEVATFYSMFNRAKV 815
            HYPSNYKQSAVIPLLDLAQQQHGGWLPVSAM+AVAKVIEVAPIRVYEVATFYSMFNR+ V
Sbjct: 63   HYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMDAVAKVIEVAPIRVYEVATFYSMFNRSPV 122

Query: 814  GKYHLMVCGTTPCMIRGSREIEDALLQHLGVKRNEVTKDGMFSVGEMECMGSCVNAPMIA 635
            GKYHL+VCGTTPCMIRGSREIEDALL+HLGVKRNEVTKDG+FSVGEMECMG CVNAPMI 
Sbjct: 123  GKYHLLVCGTTPCMIRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMIT 182

Query: 634  VADYSTGSEGYTYNYYEDLTPKRVVEIVELFRKGEIPPVGTQNKMRIMSGPEGGNTTLLS 455
            VADYS GSEGYTYNYYED+TPKRVVEIV++ R+GE PP GTQN  RI SGPEGGNTTL  
Sbjct: 183  VADYSNGSEGYTYNYYEDVTPKRVVEIVDMLRRGEKPPHGTQNPKRIKSGPEGGNTTLNG 242

Query: 454  DPKPPPCRDLDAC 416
            +PKPPPCRDLDAC
Sbjct: 243  EPKPPPCRDLDAC 255


>ref|XP_002307624.1| predicted protein [Populus trichocarpa] gi|222857073|gb|EEE94620.1|
            predicted protein [Populus trichocarpa]
          Length = 254

 Score =  430 bits (1106), Expect = e-118
 Identities = 210/252 (83%), Positives = 224/252 (88%), Gaps = 3/252 (1%)
 Frame = -3

Query: 1162 ARLASKR---IRQLLRQPLQTSRSLSTALNYHIDSPDNSTDVPWEFSEKNKEKAKEILSH 992
            AR+ + R   IRQ LR   Q SRSLSTALNYHID+ DN+ D+PWEFS  NKEK KEI+SH
Sbjct: 3    ARIVATRLLEIRQSLRLTPQASRSLSTALNYHIDTADNNPDLPWEFSASNKEKVKEIVSH 62

Query: 991  YPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNAVAKVIEVAPIRVYEVATFYSMFNRAKVG 812
            YPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNAVAKVIEVAPIRVYEVATFYSMFNR+ VG
Sbjct: 63   YPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNAVAKVIEVAPIRVYEVATFYSMFNRSPVG 122

Query: 811  KYHLMVCGTTPCMIRGSREIEDALLQHLGVKRNEVTKDGMFSVGEMECMGSCVNAPMIAV 632
            KYHL+VCGTTPCMIRGSREIEDALL+HLGVKRNEVTKDG+FSVGEMECMG CVNAPMI V
Sbjct: 123  KYHLLVCGTTPCMIRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITV 182

Query: 631  ADYSTGSEGYTYNYYEDLTPKRVVEIVELFRKGEIPPVGTQNKMRIMSGPEGGNTTLLSD 452
            ADYS GSEGYTYNYYED+TPKRVVEIVE+ RKGE PP GTQN  RI  GPEGGNTTL  +
Sbjct: 183  ADYSNGSEGYTYNYYEDVTPKRVVEIVEMLRKGEKPPHGTQNPKRIKCGPEGGNTTLHGE 242

Query: 451  PKPPPCRDLDAC 416
            PKPPPCRDLD+C
Sbjct: 243  PKPPPCRDLDSC 254


>ref|XP_004164329.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 2,
            mitochondrial-like [Cucumis sativus]
          Length = 252

 Score =  429 bits (1102), Expect = e-117
 Identities = 207/250 (82%), Positives = 224/250 (89%), Gaps = 1/250 (0%)
 Frame = -3

Query: 1162 ARLASKRIRQLLRQPLQTSRSLSTALNYHIDSPDNSTDVPWEFSEKNKEKA-KEILSHYP 986
            ARLA+ R+  + +   QTSR  STA NYH+DSPDN+ D+ WEFSE NK++   EILSHYP
Sbjct: 3    ARLAANRLAGIRQSVRQTSRCFSTAFNYHVDSPDNNPDLTWEFSETNKKRLIAEILSHYP 62

Query: 985  SNYKQSAVIPLLDLAQQQHGGWLPVSAMNAVAKVIEVAPIRVYEVATFYSMFNRAKVGKY 806
            SNYKQSAVIPLLDLAQQQHGGWLPVSAMNAVAKV+EVAPIRVYEVATFYSMFNRAKVGKY
Sbjct: 63   SNYKQSAVIPLLDLAQQQHGGWLPVSAMNAVAKVVEVAPIRVYEVATFYSMFNRAKVGKY 122

Query: 805  HLMVCGTTPCMIRGSREIEDALLQHLGVKRNEVTKDGMFSVGEMECMGSCVNAPMIAVAD 626
            HL+VCGTTPCMIRGSREIEDALL+HLGVKRNEVTKDG+FSVGEMECMG CVNAPMI VAD
Sbjct: 123  HLLVCGTTPCMIRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVAD 182

Query: 625  YSTGSEGYTYNYYEDLTPKRVVEIVELFRKGEIPPVGTQNKMRIMSGPEGGNTTLLSDPK 446
            YS GSEGYTYNYYED+TPKRVVEIVE+ R+GE PP GTQN  RI  GPEGGNTTL+SDPK
Sbjct: 183  YSNGSEGYTYNYYEDVTPKRVVEIVEMLRRGEKPPHGTQNPGRIRCGPEGGNTTLVSDPK 242

Query: 445  PPPCRDLDAC 416
            PPPCRDLDAC
Sbjct: 243  PPPCRDLDAC 252