BLASTX nr result

ID: Cimicifuga21_contig00003912 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003912
         (1226 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322670.1| predicted protein [Populus trichocarpa] gi|2...   260   4e-67
ref|XP_002527421.1| conserved hypothetical protein [Ricinus comm...   255   1e-65
ref|XP_002878181.1| hypothetical protein ARALYDRAFT_486249 [Arab...   249   1e-63
ref|XP_002278955.1| PREDICTED: uncharacterized protein LOC100260...   241   4e-61
ref|NP_191358.1| uncharacterized protein [Arabidopsis thaliana] ...   231   4e-58

>ref|XP_002322670.1| predicted protein [Populus trichocarpa] gi|222867300|gb|EEF04431.1|
            predicted protein [Populus trichocarpa]
          Length = 325

 Score =  260 bits (665), Expect = 4e-67
 Identities = 152/322 (47%), Positives = 191/322 (59%), Gaps = 38/322 (11%)
 Frame = -3

Query: 1173 MKASLKFQEDQKPPILRLKVPLNILGFPFQSGVSACGDSKDLSLNFTTFFESGPALKLVY 994
            MKASLKF+E+Q P + R KVPLNILG PFQSG+ A G+SK+LSLN +TFF+SGP++K+ Y
Sbjct: 1    MKASLKFREEQNP-VFRAKVPLNILGLPFQSGIIA-GESKELSLNLSTFFQSGPSIKIAY 58

Query: 993  KPNDSWNPFSLVVKTGIGAFGSPIAAPLSMSAEFNLLERGK---NPSFFLKFSPQFGDFG 823
            +PND+WNPFSLV+KTG G FGSP+++ + MSAEFNLL +G    NPSF L F PQFGDF 
Sbjct: 59   RPNDTWNPFSLVIKTGTGHFGSPVSSSMIMSAEFNLLSKGNSNLNPSFMLHFKPQFGDFS 118

Query: 822  VKKSTGSQSITXXXXXXXXXXXXXXXXXXXXXXXXXXXVD-------------------- 703
            +KKS  S  ++                                                 
Sbjct: 119  IKKSQSSTHVSHLTGSILNGGASSDDHGSIEAVEAATPTPDVVDGVFCGKRITVLPPVTA 178

Query: 702  ----GIFNGVEVSAKTLLPIRNKAVLKFNWGVRFPEEFKSDVINGGFGIGNRMSWISLSK 535
                G+F+GVEV+AKT LP+R+KAV+ F WGVR P E KS         G   + I+   
Sbjct: 179  SAVAGLFSGVEVTAKTRLPVRSKAVVSFRWGVRVPAEIKSG--------GESTAGINFRT 230

Query: 534  IPFLVMNKISIEHV-AKDDSKKKTADLA--------SEMEEVCVGVKRQLDVLCVENGLL 382
            IP  VMNKI IEHV  +D+  KK             +E+ E C+GVKRQL+VL  ENG L
Sbjct: 231  IPVFVMNKIGIEHVDGRDERSKKEGTTGKVEMDSGNAEVAEACLGVKRQLEVLQSENGHL 290

Query: 381  RRAVEELRSEVGGGK--AGNLD 322
            R+AVEEL  E+GGGK   G+LD
Sbjct: 291  RKAVEELSEEIGGGKLLVGDLD 312


>ref|XP_002527421.1| conserved hypothetical protein [Ricinus communis]
            gi|223533231|gb|EEF34987.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 361

 Score =  255 bits (652), Expect = 1e-65
 Identities = 162/370 (43%), Positives = 208/370 (56%), Gaps = 42/370 (11%)
 Frame = -3

Query: 1173 MKASLKFQEDQKPPILRLKVPLNILGFPFQSGVSACGDSKDLSLNFTTFFESGPALKLVY 994
            MKASLKF+E+QKP + R KVPL ILG PFQSG+ A G+SK+L+LN +TFFESGP++K+ Y
Sbjct: 1    MKASLKFREEQKP-LFRAKVPLTILGLPFQSGIVA-GESKELTLNLSTFFESGPSIKIAY 58

Query: 993  KPNDSWNPFSLVVKTGIGAFGSPIAAPLSMSAEFNLLERGKNPSFFLKFSPQFGDFGVKK 814
            +PND +NPFSLVVKTG+GAFGSPI++ L MSAEFNLL  G NPSF L F P+FGDF +KK
Sbjct: 59   RPNDVFNPFSLVVKTGMGAFGSPISSSLLMSAEFNLLSIG-NPSFMLHFKPKFGDFSIKK 117

Query: 813  STGSQSITXXXXXXXXXXXXXXXXXXXXXXXXXXXVD------------------GIFNG 688
            S  S +                                                 G F+G
Sbjct: 118  SQSSSAFDKNGNWTGSLDNLNDDGSIEVVDSPVLSNGLSEKKIRVLPQPTASAIVGAFSG 177

Query: 687  VEVSAKTLLPIRNKAVLKFNWGVRFPEEFKSDVINGGFGIGNRMSWISLSKIPFLVMNKI 508
            VEV+A T LP+R++A++ F WGVR P E KS       G  + M+ I+   IPFLVMNKI
Sbjct: 178  VEVTASTKLPVRSRAMMNFRWGVRVPAEIKS-------GSSDSMAGINFRNIPFLVMNKI 230

Query: 507  SIEHV-AKDDSKKK--------TADLASE-----MEEVCVGVKRQLDVLCVENGLLRRAV 370
             IEHV + DDSK K           L SE     M E C+ VK+Q++VL  ENGLL++AV
Sbjct: 231  GIEHVDSCDDSKSKGKVMTPLNVTKLGSELRNVDMAEACLSVKKQMEVLQAENGLLKKAV 290

Query: 369  EELRSEVGGGKAG----------NLDXXXXXXXXXXXXXGEKRAMEFNGFVGKVMDGDVN 220
            ++LR E+  G+            + D              E+R+ E      K ++ DVN
Sbjct: 291  DDLRQEISSGRLSFPVADSNAGRHRDIERNAIKNGGGSRVERRSNE-----KKAVESDVN 345

Query: 219  EEGKKVSIGS 190
            EE KK   G+
Sbjct: 346  EELKKALKGN 355


>ref|XP_002878181.1| hypothetical protein ARALYDRAFT_486249 [Arabidopsis lyrata subsp.
            lyrata] gi|297324019|gb|EFH54440.1| hypothetical protein
            ARALYDRAFT_486249 [Arabidopsis lyrata subsp. lyrata]
          Length = 357

 Score =  249 bits (635), Expect = 1e-63
 Identities = 145/299 (48%), Positives = 186/299 (62%), Gaps = 24/299 (8%)
 Frame = -3

Query: 1173 MKASLKFQEDQKPPILRLKVPLNILGFPFQSGVSACGDSKDLSLNFTTFFESGPALKLVY 994
            MKAS+KF+E+QKP + R KVPL+ILG PFQSG+ A G+SK+LSLN +TFFESGP+LK+ Y
Sbjct: 1    MKASMKFREEQKP-LFRAKVPLSILGLPFQSGIVA-GESKELSLNLSTFFESGPSLKVAY 58

Query: 993  KPNDSWNPFSLVVKTGIGAFGSPIAAPLSMSAEFNLLERGKNPSFFLKFSPQFGDFGVKK 814
            +PNDSWNPFSL+VKTG G+FGSPI++ + MSAEFNLL +G NPSF L F PQFGDF +KK
Sbjct: 59   RPNDSWNPFSLIVKTGSGSFGSPISSSMLMSAEFNLLGKG-NPSFMLHFKPQFGDFSIKK 117

Query: 813  STGS-----------------QSITXXXXXXXXXXXXXXXXXXXXXXXXXXXVDGIFNGV 685
            S  S                  SI                            + G+ +GV
Sbjct: 118  SHSSSQTNLIKSMNGSVSGDDSSIEVVDTPAVNGCGGGFRKVTVLPSTSAGDIAGLLSGV 177

Query: 684  EVSAKTLLPIRNKAVLKFNWGVRFPEEFKSDVINGGFGIGNRMSWISLSKIPFLVMNKIS 505
            EV+A+T LP+R +AVL F WGVR P E + D         +  + ISL + PFLVMNKI 
Sbjct: 178  EVAARTSLPVRGRAVLNFRWGVRVPTEIRRDF--------DPTAAISLRRFPFLVMNKIG 229

Query: 504  IEHVAKDDSK--KKTAD-----LASEMEEVCVGVKRQLDVLCVENGLLRRAVEELRSEV 349
            IEHV   D+K  K T+D      + ++ EVC+ V RQ++ L  EN  L+RAVE+LR  +
Sbjct: 230  IEHVDGSDAKVTKPTSDPGQLTTSGDVAEVCLAVNRQMEELRTENKQLKRAVEDLREVI 288


>ref|XP_002278955.1| PREDICTED: uncharacterized protein LOC100260592 [Vitis vinifera]
          Length = 367

 Score =  241 bits (614), Expect = 4e-61
 Identities = 144/307 (46%), Positives = 185/307 (60%), Gaps = 33/307 (10%)
 Frame = -3

Query: 1173 MKASLKFQEDQKPPILRLKVPLNILGFPFQSGVSACGDSKDLSLNFTTFFESGPALKLVY 994
            MKASLKF+EDQKP + R KVP+N+LG PFQSGV A G+SK+L+L+  +FF+SGP+LKL Y
Sbjct: 1    MKASLKFREDQKP-LFRAKVPINVLGLPFQSGVVA-GESKELTLSLASFFDSGPSLKLAY 58

Query: 993  KPNDSWNPFSLVVKTGIGAFGSPIAAPLSMSAEFNLLERGKNPSFFLKFSPQFGDFGVKK 814
            +PNDSWNPFSL+VKTG G FGSP ++ + M+AEFN+L RG NPSFFL F P+FGDF +KK
Sbjct: 59   RPNDSWNPFSLIVKTGSGPFGSPNSSSMMMTAEFNMLGRG-NPSFFLHFKPRFGDFCIKK 117

Query: 813  STGS---QSITXXXXXXXXXXXXXXXXXXXXXXXXXXXVDGI------------------ 697
            S  S     I                            V+G+                  
Sbjct: 118  SQSSAFVNHILKSEPNGVVSDEEDGTVEVVEKSEGYFPVNGVFSGNKIGVSPPEGVSAAS 177

Query: 696  -----FNGVEVSAKTLLPIRNKAVLKFNWGVRFPEEFKSDVINGGFGIGNRMSWISLSKI 532
                 F+GV++SA T+LP+R  AVL F WG+R P E K+ +     G  N  S IS  KI
Sbjct: 178  VINGLFSGVDLSANTVLPMRKGAVLSFRWGLRVPAEVKTALTEN--GAKNSTSAISFRKI 235

Query: 531  PFLVMNKISIEHVAKDDSKKKTADLA-------SEMEEVCVGVKRQLDVLCVENGLLRRA 373
            PFLVMNKI IEHV   DSK+             ++M E  + VKR L+VL  ENGLL+++
Sbjct: 236  PFLVMNKIGIEHVDSGDSKEDAKPSPPSNLTGNADMVETSMMVKRHLEVLQAENGLLKKS 295

Query: 372  VEELRSE 352
            +++LRSE
Sbjct: 296  IDDLRSE 302


>ref|NP_191358.1| uncharacterized protein [Arabidopsis thaliana]
            gi|6729542|emb|CAB67627.1| putative protein [Arabidopsis
            thaliana] gi|20259405|gb|AAM14023.1| unknown protein
            [Arabidopsis thaliana] gi|21689689|gb|AAM67466.1| unknown
            protein [Arabidopsis thaliana]
            gi|332646206|gb|AEE79727.1| uncharacterized protein
            [Arabidopsis thaliana]
          Length = 367

 Score =  231 bits (588), Expect = 4e-58
 Identities = 141/300 (47%), Positives = 180/300 (60%), Gaps = 25/300 (8%)
 Frame = -3

Query: 1173 MKASLKFQEDQKPPILRLKVPLNILGFPFQSGVSACGDSKDLSLNFTTFFESGPALKLVY 994
            MKAS+KF+E+QKP + R KVPL+ILG PFQSG+ A G+SK+LSLN +TFFESGP+LK+ Y
Sbjct: 1    MKASMKFREEQKP-LFRAKVPLSILGLPFQSGIVA-GESKELSLNLSTFFESGPSLKVAY 58

Query: 993  KPNDSWNPFSLVVKTGIGAFGSPIAAPLSMSAEFNLLERGKNPSFFLKFSPQFGDFGVKK 814
            +PNDSWNPFSL+VKTG G+FGSPI++ + MSAEFNLL +G NPSF L F PQFGDF +KK
Sbjct: 59   RPNDSWNPFSLIVKTGSGSFGSPISSSMLMSAEFNLLGQG-NPSFMLHFKPQFGDFSIKK 117

Query: 813  STGS-------------------QSITXXXXXXXXXXXXXXXXXXXXXXXXXXXVDGIFN 691
            S  S                    SI                            + G+ +
Sbjct: 118  SHSSSGFERNLIKSMNGSVSEDDSSIEVVDTPAVNGCGGGFRKVTVLPSTSAGDIAGLLS 177

Query: 690  GVEVSAKTLLPIRNKAVLKFNWGVRFPEEFKSDVINGGFGIGNRMSWISLSKIPFLVMNK 511
            GVEV+A+T LP+R +AVL F WGVR P E + D         +  + ISL + PFLVMNK
Sbjct: 178  GVEVAARTSLPVRGRAVLNFRWGVRVPTEIRRDF--------DPTAAISLRRFPFLVMNK 229

Query: 510  ISIEHVAKDDSK--KKTAD---LASEMEEVCVG-VKRQLDVLCVENGLLRRAVEELRSEV 349
            I IEHV   D+K  K T D   ++   +    G V   ++ L  EN  L+RAVE+LR  +
Sbjct: 230  IGIEHVDGADAKVTKSTGDPGKVSGPAQFTTSGDVAEVIEELRTENKQLKRAVEDLREVI 289