BLASTX nr result

ID: Cimicifuga21_contig00003908 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003908
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317856.1| predicted protein [Populus trichocarpa] gi|2...    69   4e-10
emb|CBI29527.3| unnamed protein product [Vitis vinifera]               67   1e-09
ref|XP_003615476.1| Integral membrane protein-like protein [Medi...    66   3e-09
ref|XP_002321935.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_003635172.1| PREDICTED: uncharacterized protein LOC100852...    66   3e-09

>ref|XP_002317856.1| predicted protein [Populus trichocarpa] gi|222858529|gb|EEE96076.1|
           predicted protein [Populus trichocarpa]
          Length = 995

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 35/45 (77%), Positives = 39/45 (86%)
 Frame = -3

Query: 135 VGDSIKWDILKSIVYGGLVECITSLGVVSSAAGGDATILNIIALG 1
           VG+S +W+ILKSIVYGGL+E ITSLGVVSSAAG  A  LNIIALG
Sbjct: 751 VGESWQWEILKSIVYGGLIESITSLGVVSSAAGAGAGTLNIIALG 795


>emb|CBI29527.3| unnamed protein product [Vitis vinifera]
          Length = 151

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 39/90 (43%), Positives = 55/90 (61%), Gaps = 15/90 (16%)
 Frame = -3

Query: 225 NIGLRRDLEDPRMSSS------------AGIDVILQIGDAGQVG---DSIKWDILKSIVY 91
           N+GL + +  P +  S            + I  ++ + +A  +    +S KW+ILKSIVY
Sbjct: 37  NVGLTKSIISPSIVPSPVEAIGSDEPLASPITQVIPVPEAPTISGPENSKKWEILKSIVY 96

Query: 90  GGLVECITSLGVVSSAAGGDATILNIIALG 1
           GGL+E ITSL +V+SAAG DAT LNI+ALG
Sbjct: 97  GGLIESITSLSIVTSAAGADATTLNILALG 126


>ref|XP_003615476.1| Integral membrane protein-like protein [Medicago truncatula]
           gi|355516811|gb|AES98434.1| Integral membrane
           protein-like protein [Medicago truncatula]
          Length = 989

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 33/46 (71%), Positives = 38/46 (82%)
 Frame = -3

Query: 138 QVGDSIKWDILKSIVYGGLVECITSLGVVSSAAGGDATILNIIALG 1
           +VG+  KW+I+KSIVYGGLVE ITSLG+VSSAA   AT LNII LG
Sbjct: 777 EVGEPKKWEIVKSIVYGGLVESITSLGIVSSAASSGATPLNIITLG 822


>ref|XP_002321935.1| predicted protein [Populus trichocarpa] gi|222868931|gb|EEF06062.1|
           predicted protein [Populus trichocarpa]
          Length = 862

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 35/52 (67%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
 Frame = -3

Query: 153 IGDAGQ-VGDSIKWDILKSIVYGGLVECITSLGVVSSAAGGDATILNIIALG 1
           +G+ G  VG+S +W+I+KSIVYGGL+E ITSL VVSSAAG  A  LNIIALG
Sbjct: 649 MGEPGAGVGESRQWEIIKSIVYGGLIESITSLSVVSSAAGAGAANLNIIALG 700


>ref|XP_003635172.1| PREDICTED: uncharacterized protein LOC100852895 [Vitis vinifera]
          Length = 681

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/67 (50%), Positives = 45/67 (67%)
 Frame = -3

Query: 201 EDPRMSSSAGIDVILQIGDAGQVGDSIKWDILKSIVYGGLVECITSLGVVSSAAGGDATI 22
           ++P  S    +  +L+         S KW+ILKSIVYGGL+E ITSL +V+SAAG DAT 
Sbjct: 565 DEPLASPITQVIPVLEAPTISGPDHSKKWEILKSIVYGGLIESITSLSIVTSAAGADATT 624

Query: 21  LNIIALG 1
           L+I+ALG
Sbjct: 625 LHILALG 631


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