BLASTX nr result

ID: Cimicifuga21_contig00003907 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003907
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518285.1| PREDICTED: uncharacterized protein LOC100788...    77   1e-12
ref|XP_002317856.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12
ref|XP_002321935.1| predicted protein [Populus trichocarpa] gi|2...    75   4e-12
ref|XP_003615476.1| Integral membrane protein-like protein [Medi...    70   2e-10
emb|CBI29527.3| unnamed protein product [Vitis vinifera]               70   2e-10

>ref|XP_003518285.1| PREDICTED: uncharacterized protein LOC100788580 [Glycine max]
          Length = 792

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 51/128 (39%), Positives = 67/128 (52%), Gaps = 16/128 (12%)
 Frame = -3

Query: 336 SKADALLPRDNNIGL--------QRDLEDPQMSSSAGNDVILQIGAEQVSPEVSHDSST- 184
           S  D +LP   NI L        ++ +  P  + + G DVIL +         SH +   
Sbjct: 498 SGIDVILPSKPNIILLDNVKKEIEKGIHHPTGNENKGGDVILDVERGAFESTTSHTADNI 557

Query: 183 ---PGVLTYRETEYGDARQ----VGDSIKWDILKSIVYGGLVECITSLGVVSSAAGGDAT 25
                ++T  +T+  +  Q    VG+   W+ILKSIVYGGLVE ITSLG+VSSA    AT
Sbjct: 558 PAEDAIITELQTQVQNGEQPRDEVGEPQGWEILKSIVYGGLVESITSLGIVSSAVSSGAT 617

Query: 24  TLNIIALG 1
            LNIIALG
Sbjct: 618 PLNIIALG 625


>ref|XP_002317856.1| predicted protein [Populus trichocarpa] gi|222858529|gb|EEE96076.1|
            predicted protein [Populus trichocarpa]
          Length = 995

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 50/113 (44%), Positives = 64/113 (56%), Gaps = 8/113 (7%)
 Frame = -3

Query: 315  PRDNNIGLQRDLEDPQMSSSAGNDVILQIGAEQV----SPEVSHDSSTPGVLTYRETEYG 148
            P    + +  +  +   + + GNDVI+ I  E      S  V  DS  P  L     +  
Sbjct: 683  PEKEKVNIGENEVNAMENKNIGNDVIVTIEKEPPKRGDSEIVCIDSVEPTSLLNSTNQTN 742

Query: 147  DARQ----VGDSIKWDILKSIVYGGLVECITSLGVVSSAAGGDATTLNIIALG 1
             + +    VG+S +W+ILKSIVYGGL+E ITSLGVVSSAAG  A TLNIIALG
Sbjct: 743  ASERKGAGVGESWQWEILKSIVYGGLIESITSLGVVSSAAGAGAGTLNIIALG 795


>ref|XP_002321935.1| predicted protein [Populus trichocarpa] gi|222868931|gb|EEF06062.1|
           predicted protein [Populus trichocarpa]
          Length = 862

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 50/112 (44%), Positives = 64/112 (57%), Gaps = 7/112 (6%)
 Frame = -3

Query: 315 PRDNNIGLQRDLEDPQMSSSAGNDVILQIGAEQV----SPEVSHDSSTPGVL--TYRETE 154
           P    + +  D  +   + + GNDVI+ I  E      S  V  DS  P  L  +  +T 
Sbjct: 589 PEKERVNIGEDAVNSVKNKNIGNDVIVTIEKEPPKRGDSEIVCIDSVEPTSLLNSTNKTN 648

Query: 153 YGD-ARQVGDSIKWDILKSIVYGGLVECITSLGVVSSAAGGDATTLNIIALG 1
            G+    VG+S +W+I+KSIVYGGL+E ITSL VVSSAAG  A  LNIIALG
Sbjct: 649 MGEPGAGVGESRQWEIIKSIVYGGLIESITSLSVVSSAAGAGAANLNIIALG 700


>ref|XP_003615476.1| Integral membrane protein-like protein [Medicago truncatula]
            gi|355516811|gb|AES98434.1| Integral membrane
            protein-like protein [Medicago truncatula]
          Length = 989

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 52/142 (36%), Positives = 74/142 (52%), Gaps = 21/142 (14%)
 Frame = -3

Query: 363  KDGKYIPIMS------KADALLPRDNNIGL----QRDLE---DPQMSSSAGNDVILQIGA 223
            +DG   P+ S        D + P   +I L    ++D+    +P + +    DVI+ +  
Sbjct: 681  QDGAQSPVQSFDSTSSAIDGIFPSKTDITLIDTVRKDINGKINPSVINENKGDVIVVVDE 740

Query: 222  E-QVSPEVSHDSSTP---GVLTYRETEYGDARQ----VGDSIKWDILKSIVYGGLVECIT 67
            E   S  +  + + P    ++T   T+     Q    VG+  KW+I+KSIVYGGLVE IT
Sbjct: 741  EANESTTLQTEGNVPRDGAIVTESPTQVDIGEQPRNEVGEPKKWEIVKSIVYGGLVESIT 800

Query: 66   SLGVVSSAAGGDATTLNIIALG 1
            SLG+VSSAA   AT LNII LG
Sbjct: 801  SLGIVSSAASSGATPLNIITLG 822


>emb|CBI29527.3| unnamed protein product [Vitis vinifera]
          Length = 151

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 47/105 (44%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
 Frame = -3

Query: 303 NIGLQRDLEDPQMSSSA----GNDVILQIGAEQVSPEVSHDSSTPGVLTYRETEYGDARQ 136
           N+GL + +  P +  S     G+D  L     QV P        P   T    E      
Sbjct: 37  NVGLTKSIISPSIVPSPVEAIGSDEPLASPITQVIP-------VPEAPTISGPE------ 83

Query: 135 VGDSIKWDILKSIVYGGLVECITSLGVVSSAAGGDATTLNIIALG 1
             +S KW+ILKSIVYGGL+E ITSL +V+SAAG DATTLNI+ALG
Sbjct: 84  --NSKKWEILKSIVYGGLIESITSLSIVTSAAGADATTLNILALG 126


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