BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003876
         (1414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137529.1| PREDICTED: succinyl-CoA ligase [ADP-forming]...   565   e-159
gb|ABK95068.1| unknown [Populus trichocarpa]                          561   e-157
ref|XP_003620150.1| Succinyl-CoA ligase [Medicago truncatula] gi...   560   e-157
ref|XP_003548295.1| PREDICTED: succinyl-CoA ligase [ADP-forming]...   558   e-157
ref|XP_002514510.1| Succinyl-CoA ligase [GDP-forming] subunit al...   558   e-157

>ref|XP_004137529.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit alpha-1,
            mitochondrial-like [Cucumis sativus]
          Length = 342

 Score =  565 bits (1457), Expect = e-159
 Identities = 287/341 (84%), Positives = 298/341 (87%), Gaps = 1/341 (0%)
 Frame = +3

Query: 156  MSRRAT-KLIGSLASNLRTRXXXXXXXXXXXXXXXRHFTASAPPPPAVFVDKSTRVICQG 332
            M R+A  KLIGS  +   +                RH++A+  PPPAVFVDK+TRVICQG
Sbjct: 1    MGRQAVAKLIGSAINRKTSSSSSSSSVFSRAASQIRHYSAAPSPPPAVFVDKNTRVICQG 60

Query: 333  ITGKNGTFHTEQAIEYGTNMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPP 512
            ITGKNGTFHTEQAIEYGT MVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPP
Sbjct: 61   ITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPP 120

Query: 513  PFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNKQSKTRLIGPNCPGIIKPGECK 692
            PF            LDLVVCITEGIPQHDMVRVKAALNKQSKTRLIGPNCPGIIKPGECK
Sbjct: 121  PFAAAAIMEAMEAELDLVVCITEGIPQHDMVRVKAALNKQSKTRLIGPNCPGIIKPGECK 180

Query: 693  IGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCMTK 872
            IGIMPGYIHKPGR+GIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDC+ K
Sbjct: 181  IGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCIEK 240

Query: 873  FLADPQTEGIVLIGEIGGTAEEDAAALIKESGTEKPIVAFIAGLTAPPGRRMGHAGAIVS 1052
            FL DPQTEGIVLIGEIGGTAEEDAAALIKESGT+KPIV FIAGLTAPPGRRMGHAGAIVS
Sbjct: 241  FLVDPQTEGIVLIGEIGGTAEEDAAALIKESGTDKPIVGFIAGLTAPPGRRMGHAGAIVS 300

Query: 1053 GGKGTAQDKIKTLREAGVTVVESPAKIGVAMLECFKQRGLV 1175
            GGKGTAQDKIKTLREAGVTVVESPAKIGV+MLE FKQRGLV
Sbjct: 301  GGKGTAQDKIKTLREAGVTVVESPAKIGVSMLEVFKQRGLV 341


>gb|ABK95068.1| unknown [Populus trichocarpa]
          Length = 331

 Score =  561 bits (1445), Expect = e-157
 Identities = 282/340 (82%), Positives = 299/340 (87%)
 Frame = +3

Query: 156  MSRRATKLIGSLASNLRTRXXXXXXXXXXXXXXXRHFTASAPPPPAVFVDKSTRVICQGI 335
            MSR+A +L+ SL+S + +                R FTA+ PPPPAVFVDK+TRVICQGI
Sbjct: 1    MSRQAKRLVSSLSSKISS----------FSYSQSRSFTAAPPPPPAVFVDKNTRVICQGI 50

Query: 336  TGKNGTFHTEQAIEYGTNMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPP 515
            TGKNGTFHTEQAIEYGT MVGGVTPKKGGTEHLGLPVFNSV+EAKAETKANASVIYVPPP
Sbjct: 51   TGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVSEAKAETKANASVIYVPPP 110

Query: 516  FXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNKQSKTRLIGPNCPGIIKPGECKI 695
            F            LDLVVCITEGIPQHDMVRVKAA+ KQ+KTRLIGPNCPGIIKPGECKI
Sbjct: 111  FAAAAILEAVEAELDLVVCITEGIPQHDMVRVKAAIKKQTKTRLIGPNCPGIIKPGECKI 170

Query: 696  GIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCMTKF 875
            GIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDC+ KF
Sbjct: 171  GIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCVEKF 230

Query: 876  LADPQTEGIVLIGEIGGTAEEDAAALIKESGTEKPIVAFIAGLTAPPGRRMGHAGAIVSG 1055
            LADPQTEGIVLIGEIGGTAEEDAA LIKESGTEKP+VAFIAG+TAPPGRRMGHAGAIVSG
Sbjct: 231  LADPQTEGIVLIGEIGGTAEEDAATLIKESGTEKPVVAFIAGVTAPPGRRMGHAGAIVSG 290

Query: 1056 GKGTAQDKIKTLREAGVTVVESPAKIGVAMLECFKQRGLV 1175
            GKGTAQDKIKTLR+AGV VVESPAKIG AML+ FK+RGLV
Sbjct: 291  GKGTAQDKIKTLRDAGVIVVESPAKIGTAMLDVFKERGLV 330


>ref|XP_003620150.1| Succinyl-CoA ligase [Medicago truncatula] gi|355495165|gb|AES76368.1|
            Succinyl-CoA ligase [Medicago truncatula]
          Length = 323

 Score =  560 bits (1442), Expect = e-157
 Identities = 285/338 (84%), Positives = 296/338 (87%)
 Frame = +3

Query: 165  RATKLIGSLASNLRTRXXXXXXXXXXXXXXXRHFTASAPPPPAVFVDKSTRVICQGITGK 344
            R TKL  S+ASN R                 R+F  S+ P PAVFVDKSTRVICQGITGK
Sbjct: 5    RVTKLFSSIASNNR-----------------RNF--SSTPSPAVFVDKSTRVICQGITGK 45

Query: 345  NGTFHTEQAIEYGTNMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXX 524
            NGTFHTEQAIEYGTNMVGGVTPKKGGTEHLGLPVFNSVAEAK ETKANASVIYVPPPF  
Sbjct: 46   NGTFHTEQAIEYGTNMVGGVTPKKGGTEHLGLPVFNSVAEAKTETKANASVIYVPPPFAA 105

Query: 525  XXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNKQSKTRLIGPNCPGIIKPGECKIGIM 704
                      LDLVVCITEGIPQHDMVRVKAALN+QSKTRLIGPNCPGIIKPGECKIGIM
Sbjct: 106  AAIMEAVEAELDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIM 165

Query: 705  PGYIHKPGRVGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCMTKFLAD 884
            PGYIHKPGR+GIVSRSGTLTYEAV+QTTAVGLGQSTCVGIGGDPFNGTNFVDC+TKFLAD
Sbjct: 166  PGYIHKPGRIGIVSRSGTLTYEAVYQTTAVGLGQSTCVGIGGDPFNGTNFVDCLTKFLAD 225

Query: 885  PQTEGIVLIGEIGGTAEEDAAALIKESGTEKPIVAFIAGLTAPPGRRMGHAGAIVSGGKG 1064
            PQTEGI+LIGEIGGTAEEDAAALIKESGTEKP+VAFIAGLTAPPGRRMGHAGAIVSGGKG
Sbjct: 226  PQTEGIILIGEIGGTAEEDAAALIKESGTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKG 285

Query: 1065 TAQDKIKTLREAGVTVVESPAKIGVAMLECFKQRGLVE 1178
            TAQDKI TLREAGVTVVESPAKIG AM E FKQ+GLV+
Sbjct: 286  TAQDKISTLREAGVTVVESPAKIGAAMFEIFKQKGLVQ 323


>ref|XP_003548295.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit alpha-1,
            mitochondrial-like [Glycine max]
          Length = 325

 Score =  558 bits (1439), Expect = e-157
 Identities = 286/342 (83%), Positives = 301/342 (88%), Gaps = 1/342 (0%)
 Frame = +3

Query: 156  MSRRA-TKLIGSLASNLRTRXXXXXXXXXXXXXXXRHFTASAPPPPAVFVDKSTRVICQG 332
            M+R+A TKL+ S+AS                    RHF+A++P   AVFVDKSTRVICQG
Sbjct: 1    MARQALTKLLSSIASRRH--------------HGLRHFSAASP---AVFVDKSTRVICQG 43

Query: 333  ITGKNGTFHTEQAIEYGTNMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPP 512
            ITGKNGTFHTEQAIEYGTNMVGGVTPKKGGTEHLGLPVFN+VAEAKAETKANASVIYVPP
Sbjct: 44   ITGKNGTFHTEQAIEYGTNMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASVIYVPP 103

Query: 513  PFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNKQSKTRLIGPNCPGIIKPGECK 692
            PF            LDLVVCITEGIPQHDMVRVKAALN+QSKTRLIGPNCPGIIKPGECK
Sbjct: 104  PFAAAAIMEAMEAELDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECK 163

Query: 693  IGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCMTK 872
            IGIMPGYIHKPGR+GIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDC+ K
Sbjct: 164  IGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCLQK 223

Query: 873  FLADPQTEGIVLIGEIGGTAEEDAAALIKESGTEKPIVAFIAGLTAPPGRRMGHAGAIVS 1052
            FL DPQTEGI+LIGEIGGTAEEDAAALIKESGTEKP+VAFIAGLTAPPGRRMGHAGAIVS
Sbjct: 224  FLTDPQTEGIILIGEIGGTAEEDAAALIKESGTEKPVVAFIAGLTAPPGRRMGHAGAIVS 283

Query: 1053 GGKGTAQDKIKTLREAGVTVVESPAKIGVAMLECFKQRGLVE 1178
            GGKGTAQDKIKTLREAGVTVVESPAKIG AML+ FKQRGLV+
Sbjct: 284  GGKGTAQDKIKTLREAGVTVVESPAKIGAAMLDVFKQRGLVQ 325


>ref|XP_002514510.1| Succinyl-CoA ligase [GDP-forming] subunit alpha-2, mitochondrial
            precursor, putative [Ricinus communis]
            gi|223546409|gb|EEF47910.1| Succinyl-CoA ligase
            [GDP-forming] subunit alpha-2, mitochondrial precursor,
            putative [Ricinus communis]
          Length = 334

 Score =  558 bits (1439), Expect = e-157
 Identities = 285/340 (83%), Positives = 300/340 (88%), Gaps = 1/340 (0%)
 Frame = +3

Query: 156  MSRRAT-KLIGSLASNLRTRXXXXXXXXXXXXXXXRHFTASAPPPPAVFVDKSTRVICQG 332
            M+R+A  KLIGS+AS   +                R + A+A PP AVFVDK+TRVICQG
Sbjct: 1    MARQAVAKLIGSIASRKPS--------LSSSAIQTRQYAAAASPPAAVFVDKNTRVICQG 52

Query: 333  ITGKNGTFHTEQAIEYGTNMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPP 512
            ITGKNGTFHTEQAIEYGT MVGGVTPKKGGTEHLGLPVFN+VAEAKAETKANASVIYVPP
Sbjct: 53   ITGKNGTFHTEQAIEYGTTMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASVIYVPP 112

Query: 513  PFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNKQSKTRLIGPNCPGIIKPGECK 692
            PF            LDLVVCITEGIPQHDMVRVKAALN+QSKTRLIGPNCPGIIKPGECK
Sbjct: 113  PFAAAAIMEAMEAELDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECK 172

Query: 693  IGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCMTK 872
            IGIMPGYIHKPGR+GIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDC+ K
Sbjct: 173  IGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCIEK 232

Query: 873  FLADPQTEGIVLIGEIGGTAEEDAAALIKESGTEKPIVAFIAGLTAPPGRRMGHAGAIVS 1052
            FLADPQTEGI+LIGEIGGTAEEDAAALIKESGT+KPIVAFIAGLTAPPGRRMGHAGAIVS
Sbjct: 233  FLADPQTEGIILIGEIGGTAEEDAAALIKESGTDKPIVAFIAGLTAPPGRRMGHAGAIVS 292

Query: 1053 GGKGTAQDKIKTLREAGVTVVESPAKIGVAMLECFKQRGL 1172
            GGKGTAQDKIKTL+EAGVTVVESPAKIGVAML+ FKQRGL
Sbjct: 293  GGKGTAQDKIKTLKEAGVTVVESPAKIGVAMLDVFKQRGL 332