BLASTX nr result

ID: Cimicifuga21_contig00003850 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003850
         (1256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283152.1| PREDICTED: G2/mitotic-specific cyclin S13-6 ...    95   7e-31
gb|AAD31790.1|AF126107_1 mitotic cyclin B1-3 [Lupinus luteus] gi...    95   9e-31
gb|AAC61888.1| cyclin [Lupinus luteus] gi|4884726|gb|AAD31789.1|...    91   7e-30
emb|CAA99990.1| mitotic cyclin [Sesbania rostrata]                     89   7e-30
dbj|BAA09368.1| B-type cyclin [Nicotiana tabacum]                      94   9e-30

>ref|XP_002283152.1| PREDICTED: G2/mitotic-specific cyclin S13-6 [Vitis vinifera]
           gi|297741679|emb|CBI32811.3| unnamed protein product
           [Vitis vinifera]
          Length = 453

 Score = 94.7 bits (234), Expect(2) = 7e-31
 Identities = 42/62 (67%), Positives = 54/62 (87%)
 Frame = -2

Query: 427 QQVLLMEK*ILGKLEWRLIVPTP*VFLVRFIKATLSDQELEHMVFFLAELGLMHYLTIIY 248
           QQ+L+MEK ILGKLEW L VPTP VFLVRF+KA++ D ++EHMV+F AELGL +Y+T++Y
Sbjct: 309 QQILMMEKAILGKLEWTLTVPTPYVFLVRFVKASIPDTQMEHMVYFFAELGLTNYVTMMY 368

Query: 247 CP 242
           CP
Sbjct: 369 CP 370



 Score = 67.0 bits (162), Expect(2) = 7e-31
 Identities = 32/53 (60%), Positives = 42/53 (79%)
 Frame = -1

Query: 212 TGFSELQLMDCAKLLVNLHSATVVSKLQVVHLKYSNPQRNVVALLPPAKNHMA 54
           TG+SE QL+ CAKLLV+ HS    +KL+VV+ KYS PQR+ V+LLPPAK+ +A
Sbjct: 399 TGYSETQLLGCAKLLVSFHSIAAENKLKVVYRKYSQPQRSGVSLLPPAKSLLA 451


>gb|AAD31790.1|AF126107_1 mitotic cyclin B1-3 [Lupinus luteus] gi|3253137|gb|AAC61889.1|
           cyclin [Lupinus luteus]
          Length = 459

 Score = 94.7 bits (234), Expect(2) = 9e-31
 Identities = 44/62 (70%), Positives = 54/62 (87%)
 Frame = -2

Query: 427 QQVLLMEK*ILGKLEWRLIVPTP*VFLVRFIKATLSDQELEHMVFFLAELGLMHYLTIIY 248
           +Q+L+MEK ILGKLEW L VPTP VFLVRFIKA++ DQELE+M  FL+ELG+MHY T++Y
Sbjct: 302 EQILVMEKIILGKLEWTLTVPTPYVFLVRFIKASVPDQELENMSHFLSELGMMHYSTLMY 361

Query: 247 CP 242
           CP
Sbjct: 362 CP 363



 Score = 66.6 bits (161), Expect(2) = 9e-31
 Identities = 32/49 (65%), Positives = 38/49 (77%)
 Frame = -1

Query: 212 TGFSELQLMDCAKLLVNLHSATVVSKLQVVHLKYSNPQRNVVALLPPAK 66
           T +SE QLMDCAKLLV+ HS     KL+VVH KYS+PQ+  VA+LPPAK
Sbjct: 392 TSYSEEQLMDCAKLLVSFHSTIGGGKLKVVHRKYSDPQKGAVAVLPPAK 440


>gb|AAC61888.1| cyclin [Lupinus luteus] gi|4884726|gb|AAD31789.1| mitotic cyclin
           B1-2 [Lupinus luteus]
          Length = 454

 Score = 90.9 bits (224), Expect(2) = 7e-30
 Identities = 42/62 (67%), Positives = 52/62 (83%)
 Frame = -2

Query: 427 QQVLLMEK*ILGKLEWRLIVPTP*VFLVRFIKATLSDQELEHMVFFLAELGLMHYLTIIY 248
           +Q+L+MEK ILGKLEW L VPT  VFL RFIKA++ DQELE+M  FL+ELG+MHY T++Y
Sbjct: 304 EQILVMEKIILGKLEWTLTVPTTFVFLTRFIKASVPDQELENMGHFLSELGMMHYATLVY 363

Query: 247 CP 242
           CP
Sbjct: 364 CP 365



 Score = 67.4 bits (163), Expect(2) = 7e-30
 Identities = 33/59 (55%), Positives = 42/59 (71%)
 Frame = -1

Query: 212 TGFSELQLMDCAKLLVNLHSATVVSKLQVVHLKYSNPQRNVVALLPPAKNHMALVGVGS 36
           TG+SE QLMDCA+LLV+ HS     KL+V++ KYS+PQR  V++ PPAKN M     GS
Sbjct: 394 TGYSEEQLMDCARLLVSFHSTLANGKLKVLYRKYSDPQRGAVSMHPPAKNLMPESSCGS 452


>emb|CAA99990.1| mitotic cyclin [Sesbania rostrata]
          Length = 445

 Score = 89.4 bits (220), Expect(2) = 7e-30
 Identities = 41/61 (67%), Positives = 51/61 (83%)
 Frame = -2

Query: 427 QQVLLMEK*ILGKLEWRLIVPTP*VFLVRFIKATLSDQELEHMVFFLAELGLMHYLTIIY 248
           +Q+L MEK ILGKLEW L VPTP VFLVRFIKA++ D+ LE+M  FL+ELG+MHY T++Y
Sbjct: 298 EQILFMEKIILGKLEWTLTVPTPFVFLVRFIKASVPDEALENMAHFLSELGMMHYATLMY 357

Query: 247 C 245
           C
Sbjct: 358 C 358



 Score = 68.9 bits (167), Expect(2) = 7e-30
 Identities = 33/50 (66%), Positives = 41/50 (82%)
 Frame = -1

Query: 212 TGFSELQLMDCAKLLVNLHSATVVSKLQVVHLKYSNPQRNVVALLPPAKN 63
           TG+SE QLMDCA+LLV+LHS     KL+VV+ KYS+P+R  VA+LPPAKN
Sbjct: 388 TGYSEEQLMDCARLLVSLHSTVGNGKLKVVYRKYSDPERGSVAVLPPAKN 437


>dbj|BAA09368.1| B-type cyclin [Nicotiana tabacum]
          Length = 473

 Score = 94.0 bits (232), Expect(2) = 9e-30
 Identities = 46/61 (75%), Positives = 52/61 (85%)
 Frame = -2

Query: 424 QVLLMEK*ILGKLEWRLIVPTP*VFLVRFIKATLSDQELEHMVFFLAELGLMHYLTIIYC 245
           QVL MEK ILG+LEW L VPTP VFL RFIKA+L D E+E+MV+FLAELGLM+Y TIIYC
Sbjct: 272 QVLAMEKEILGQLEWYLTVPTPYVFLARFIKASLPDSEIENMVYFLAELGLMNYATIIYC 331

Query: 244 P 242
           P
Sbjct: 332 P 332



 Score = 63.9 bits (154), Expect(2) = 9e-30
 Identities = 30/53 (56%), Positives = 42/53 (79%)
 Frame = -1

Query: 212 TGFSELQLMDCAKLLVNLHSATVVSKLQVVHLKYSNPQRNVVALLPPAKNHMA 54
           TGFSE QL++CA+LLV+  SA    KL+V++ KYS+P+R VV+LL PAK+ +A
Sbjct: 361 TGFSESQLIECARLLVSYQSAAATHKLKVIYKKYSSPERGVVSLLTPAKSLLA 413


Top