BLASTX nr result

ID: Cimicifuga21_contig00003847 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003847
         (1142 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN40777.1| unknown [Picea sitchensis]                             497   e-138
ref|XP_002532670.1| eukaryotic translation initiation factor 3 s...   496   e-138
ref|XP_003535892.1| PREDICTED: eukaryotic translation initiation...   494   e-137
gb|ABK34467.1| eukaryotic initiation factor 3e [Oryza sativa Jap...   493   e-137
gb|ACU17653.1| unknown [Glycine max]                                  492   e-137

>gb|ACN40777.1| unknown [Picea sitchensis]
          Length = 441

 Score =  497 bits (1279), Expect = e-138
 Identities = 241/292 (82%), Positives = 263/292 (90%)
 Frame = -1

Query: 1142 LYQYAKFQFECGNYSGAADFLYQYRALCTNSDKNLSALWGKLAAEILTPNWDIALKELNC 963
            LYQYAKFQFECGNYSGAADFLYQYR  CTNSD++LSALWGKLAAEIL  NWDIAL+ELN 
Sbjct: 130  LYQYAKFQFECGNYSGAADFLYQYRTFCTNSDRSLSALWGKLAAEILMQNWDIALEELNR 189

Query: 962  LREIIDAKNFQSPLNQLQSRIWLMHWSLFIFFNHDSGRNGIIDLFLHDRYLNAIQTNAPH 783
            L+EIID+KNF SPLNQLQ+R WLMHWSLFIFFNH++GRNGIIDLF  +RYLNAIQTNA H
Sbjct: 190  LKEIIDSKNFSSPLNQLQNRTWLMHWSLFIFFNHENGRNGIIDLFFQERYLNAIQTNAHH 249

Query: 782  LLRYLAFALVINKKRRPQLKELIKVIQQDQCSYKDPIIEFLQCLYVNYDFDGAQQKLREC 603
            LLRYLA A+V+NK+RR  LKELIKVIQQ+Q +YKDPI EFL+CLYVNYDF+GAQQKL EC
Sbjct: 250  LLRYLATAVVVNKRRRNMLKELIKVIQQEQYTYKDPITEFLECLYVNYDFEGAQQKLVEC 309

Query: 602  EDVILNDPFLGKRVGEGNFSTVPLRDEFLENARLFIFETYCRIHQCIDIGMLGEKLDMTY 423
            E VILNDPFLGK+V EGNF TVPLRDEFLENARLFIFETYCRIHQCIDI ML EKL M+Y
Sbjct: 310  EKVILNDPFLGKQVQEGNFVTVPLRDEFLENARLFIFETYCRIHQCIDIRMLAEKLSMSY 369

Query: 422  DEAERWIVNFVRNAKLDAKIDSKSGTVVMEPNRVNVYEQIIESTEGLSLRTY 267
            DEAERWIVN V+NAKLDAKIDS SGTVVM  N  NVYEQIIE+T+ LS+RTY
Sbjct: 370  DEAERWIVNLVKNAKLDAKIDSTSGTVVMGTNHTNVYEQIIENTKQLSMRTY 421


>ref|XP_002532670.1| eukaryotic translation initiation factor 3 subunit, putative [Ricinus
            communis] gi|223527603|gb|EEF29717.1| eukaryotic
            translation initiation factor 3 subunit, putative
            [Ricinus communis]
          Length = 323

 Score =  496 bits (1278), Expect = e-138
 Identities = 236/300 (78%), Positives = 271/300 (90%)
 Frame = -1

Query: 1142 LYQYAKFQFECGNYSGAADFLYQYRALCTNSDKNLSALWGKLAAEILTPNWDIALKELNC 963
            LYQYAKFQFECGNYSGAAD+LYQYRALCTNS+++LSALWGKLAAEIL  NWDIAL+ELN 
Sbjct: 16   LYQYAKFQFECGNYSGAADYLYQYRALCTNSERSLSALWGKLAAEILMQNWDIALEELNR 75

Query: 962  LREIIDAKNFQSPLNQLQSRIWLMHWSLFIFFNHDSGRNGIIDLFLHDRYLNAIQTNAPH 783
            L+EIID+KNF SPLNQ+Q+RIWLMHWSLFIFFNHD+GR  IIDLF  D+YLNAIQTNAPH
Sbjct: 76   LKEIIDSKNFSSPLNQVQTRIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLNAIQTNAPH 135

Query: 782  LLRYLAFALVINKKRRPQLKELIKVIQQDQCSYKDPIIEFLQCLYVNYDFDGAQQKLREC 603
            LLRYLA A ++NK+RRPQ KE IKVIQQ+Q SYKDPI EFL C+YVNYDFDGAQ+K++EC
Sbjct: 136  LLRYLATAFIVNKRRRPQFKEFIKVIQQEQHSYKDPITEFLACVYVNYDFDGAQKKMKEC 195

Query: 602  EDVILNDPFLGKRVGEGNFSTVPLRDEFLENARLFIFETYCRIHQCIDIGMLGEKLDMTY 423
            E+VILNDPFL KRV +GNFSTVPLRDEFLENARLFIFETYCRIHQ ID+G+L EKL++ Y
Sbjct: 196  EEVILNDPFLAKRVEDGNFSTVPLRDEFLENARLFIFETYCRIHQRIDMGILAEKLNLNY 255

Query: 422  DEAERWIVNFVRNAKLDAKIDSKSGTVVMEPNRVNVYEQIIESTEGLSLRTYKTSSLILE 243
            +EAERWIVN +R++KLDAKIDSKSGTV+MEPN  NVYEQ+I+ T+GLS RT K  + +LE
Sbjct: 256  EEAERWIVNLIRSSKLDAKIDSKSGTVIMEPNHPNVYEQLIDHTKGLSGRTNKLVNQLLE 315


>ref|XP_003535892.1| PREDICTED: eukaryotic translation initiation factor 3 subunit E-like
            [Glycine max]
          Length = 437

 Score =  494 bits (1272), Expect = e-137
 Identities = 234/300 (78%), Positives = 271/300 (90%)
 Frame = -1

Query: 1142 LYQYAKFQFECGNYSGAADFLYQYRALCTNSDKNLSALWGKLAAEILTPNWDIALKELNC 963
            LYQYAKFQFECGNYSGAAD+LYQYRALCTNS+++LSALWGKLAAEIL  NWDIAL+ELN 
Sbjct: 130  LYQYAKFQFECGNYSGAADYLYQYRALCTNSERSLSALWGKLAAEILMQNWDIALEELNR 189

Query: 962  LREIIDAKNFQSPLNQLQSRIWLMHWSLFIFFNHDSGRNGIIDLFLHDRYLNAIQTNAPH 783
            L+EIID+KNF SPLNQ+QSRIWLMHWSLFIFFNHD+GR  IIDLF  D+YLNAIQT+APH
Sbjct: 190  LKEIIDSKNFASPLNQVQSRIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLNAIQTSAPH 249

Query: 782  LLRYLAFALVINKKRRPQLKELIKVIQQDQCSYKDPIIEFLQCLYVNYDFDGAQQKLREC 603
            LLRYLA A ++NK+RRPQ K+ IKVIQQ+Q SYKDPI EFL C+YVNYDFDGAQ+K+REC
Sbjct: 250  LLRYLATAFIVNKRRRPQFKDFIKVIQQEQHSYKDPITEFLACVYVNYDFDGAQKKMREC 309

Query: 602  EDVILNDPFLGKRVGEGNFSTVPLRDEFLENARLFIFETYCRIHQCIDIGMLGEKLDMTY 423
            E+VILNDPFLGKRV E NFSTVPLRDEFLENARLFIFETYCRIHQ ID+G+L EKL++ Y
Sbjct: 310  EEVILNDPFLGKRVEESNFSTVPLRDEFLENARLFIFETYCRIHQRIDMGVLAEKLNLNY 369

Query: 422  DEAERWIVNFVRNAKLDAKIDSKSGTVVMEPNRVNVYEQIIESTEGLSLRTYKTSSLILE 243
            +EAERWIVN +R++KLDAKIDS++G V+MEPN +NVYEQ+I+ T+ L+ RTYK  S +LE
Sbjct: 370  EEAERWIVNLIRSSKLDAKIDSETGAVIMEPNHLNVYEQLIDHTKALNGRTYKLVSQLLE 429


>gb|ABK34467.1| eukaryotic initiation factor 3e [Oryza sativa Japonica Group]
          Length = 439

 Score =  493 bits (1270), Expect = e-137
 Identities = 235/300 (78%), Positives = 269/300 (89%)
 Frame = -1

Query: 1142 LYQYAKFQFECGNYSGAADFLYQYRALCTNSDKNLSALWGKLAAEILTPNWDIALKELNC 963
            LYQYAKFQF+CGNYS AA +LYQYRALCTNS+++LSALWGKLAAEIL  NWD+AL ELN 
Sbjct: 130  LYQYAKFQFDCGNYSDAAVYLYQYRALCTNSERSLSALWGKLAAEILMQNWDVALDELNR 189

Query: 962  LREIIDAKNFQSPLNQLQSRIWLMHWSLFIFFNHDSGRNGIIDLFLHDRYLNAIQTNAPH 783
            L+EIID+KNF SPLNQLQ+RIWLMHWS+FIFFNH++GRNGIIDLF  DRYLNAIQTNAPH
Sbjct: 190  LKEIIDSKNFSSPLNQLQNRIWLMHWSIFIFFNHENGRNGIIDLFFQDRYLNAIQTNAPH 249

Query: 782  LLRYLAFALVINKKRRPQLKELIKVIQQDQCSYKDPIIEFLQCLYVNYDFDGAQQKLREC 603
            LLRYLA A+V+NK+RR  LKELIKVIQQ+Q SYKDPI EFL+CLYVNYDFDGAQQKL EC
Sbjct: 250  LLRYLATAVVVNKRRRNMLKELIKVIQQEQHSYKDPITEFLECLYVNYDFDGAQQKLIEC 309

Query: 602  EDVILNDPFLGKRVGEGNFSTVPLRDEFLENARLFIFETYCRIHQCIDIGMLGEKLDMTY 423
            E VILNDPFLGKR+ EGNF TVPLRDEFLENARLFIFETYCRIHQCIDIGML +KL+M+Y
Sbjct: 310  EQVILNDPFLGKRIEEGNFVTVPLRDEFLENARLFIFETYCRIHQCIDIGMLSQKLNMSY 369

Query: 422  DEAERWIVNFVRNAKLDAKIDSKSGTVVMEPNRVNVYEQIIESTEGLSLRTYKTSSLILE 243
            DEAE WI+N VRN+KLDAKIDS SGT++M  N VN++EQ+IES + L++RT+  +  I+E
Sbjct: 370  DEAELWIMNLVRNSKLDAKIDSVSGTLIMTTNHVNIHEQVIESLKNLNMRTFLLAKNIVE 429


>gb|ACU17653.1| unknown [Glycine max]
          Length = 323

 Score =  492 bits (1267), Expect = e-137
 Identities = 233/300 (77%), Positives = 271/300 (90%)
 Frame = -1

Query: 1142 LYQYAKFQFECGNYSGAADFLYQYRALCTNSDKNLSALWGKLAAEILTPNWDIALKELNC 963
            LYQYAKFQFECGNYSGAAD+LYQYRALCTNS+++LSALWGKLAAEIL  NWDIAL+ELN 
Sbjct: 16   LYQYAKFQFECGNYSGAADYLYQYRALCTNSERSLSALWGKLAAEILMQNWDIALEELNR 75

Query: 962  LREIIDAKNFQSPLNQLQSRIWLMHWSLFIFFNHDSGRNGIIDLFLHDRYLNAIQTNAPH 783
            L+EIID+KNF SPLNQ+QSRIWLMHWSLFIFFNHD+GR  IIDLF  D+YLNAIQT+APH
Sbjct: 76   LKEIIDSKNFASPLNQVQSRIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLNAIQTSAPH 135

Query: 782  LLRYLAFALVINKKRRPQLKELIKVIQQDQCSYKDPIIEFLQCLYVNYDFDGAQQKLREC 603
            LLRYLA A ++NK+RRPQ K+ IKVIQQ+Q SYK+PI EFL C+YVNYDFDGAQ+K+REC
Sbjct: 136  LLRYLATAFIVNKRRRPQFKDFIKVIQQEQHSYKNPITEFLACVYVNYDFDGAQKKMREC 195

Query: 602  EDVILNDPFLGKRVGEGNFSTVPLRDEFLENARLFIFETYCRIHQCIDIGMLGEKLDMTY 423
            E+VILNDPFLGKRV E NFSTVPLRDEFLENARLFIFETYCRIHQ ID+G+L EKL++ Y
Sbjct: 196  EEVILNDPFLGKRVEESNFSTVPLRDEFLENARLFIFETYCRIHQRIDMGVLAEKLNLNY 255

Query: 422  DEAERWIVNFVRNAKLDAKIDSKSGTVVMEPNRVNVYEQIIESTEGLSLRTYKTSSLILE 243
            +EAERWIVN +R++KLDAKIDS++G V+MEPN +NVYEQ+I+ T+ L+ RTYK  S +LE
Sbjct: 256  EEAERWIVNLIRSSKLDAKIDSETGAVIMEPNHLNVYEQLIDHTKALNGRTYKLVSQLLE 315


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