BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003812
         (778 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311407.1| predicted protein [Populus trichocarpa] gi|1...   264   2e-68
dbj|BAJ53160.1| JHL10I11.6 [Jatropha curcas]                          262   5e-68
ref|XP_002269703.1| PREDICTED: H/ACA ribonucleoprotein complex s...   252   7e-65
ref|XP_002512015.1| H/ACA ribonucleoprotein complex subunit, put...   251   1e-64
gb|AFK48249.1| unknown [Lotus japonicus]                              250   2e-64

>ref|XP_002311407.1| predicted protein [Populus trichocarpa] gi|118483385|gb|ABK93593.1|
           unknown [Populus trichocarpa]
           gi|118485555|gb|ABK94629.1| unknown [Populus
           trichocarpa] gi|222851227|gb|EEE88774.1| predicted
           protein [Populus trichocarpa]
          Length = 155

 Score =  264 bits (674), Expect = 2e-68
 Identities = 131/155 (84%), Positives = 146/155 (94%)
 Frame = +3

Query: 90  MGSDSETEKSSHKERKKVQALAPIAKPLAGKKLSKKTLKLVRKAAESKCLKRGVKEVVKS 269
           MGSDSETE+S+ KE+KK+ +LAPIAKPLAGKKL K+TLKLVRKA+ESKCLKRGVKEVVKS
Sbjct: 1   MGSDSETERSNIKEKKKITSLAPIAKPLAGKKLCKRTLKLVRKASESKCLKRGVKEVVKS 60

Query: 270 IRRGNKGLCIIAGNISPIDVITHVPILCEEADIPYVYVHSKEDLATAGATKRPTCCVLVL 449
           IRRG+KGLCIIAGNISPIDVITHVPILCEE+DIPYVYV SKEDLA+AGATKRPTCCVLVL
Sbjct: 61  IRRGHKGLCIIAGNISPIDVITHVPILCEESDIPYVYVTSKEDLASAGATKRPTCCVLVL 120

Query: 450 TKPTKGELAAEEQEKLESDFSQVVSDVSELTRGLF 554
           TKPTKGE+  E+QEKL++D+ QVVSDVSELT  LF
Sbjct: 121 TKPTKGEIGKEDQEKLKADYDQVVSDVSELTSSLF 155


>dbj|BAJ53160.1| JHL10I11.6 [Jatropha curcas]
          Length = 155

 Score =  262 bits (670), Expect = 5e-68
 Identities = 131/155 (84%), Positives = 143/155 (92%)
 Frame = +3

Query: 90  MGSDSETEKSSHKERKKVQALAPIAKPLAGKKLSKKTLKLVRKAAESKCLKRGVKEVVKS 269
           MGSDSE EKS  +E+KKV AL+PIAKPLAGKKLSKKTLKLVRKAAE KCLKRGVKEVVKS
Sbjct: 1   MGSDSEAEKSQKQEKKKVIALSPIAKPLAGKKLSKKTLKLVRKAAEHKCLKRGVKEVVKS 60

Query: 270 IRRGNKGLCIIAGNISPIDVITHVPILCEEADIPYVYVHSKEDLATAGATKRPTCCVLVL 449
           IRRG+KGLC+IAGNISPIDVITHVPILCEE+DIPY+YV SKEDLA AGATKRPTCCVLVL
Sbjct: 61  IRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVSSKEDLANAGATKRPTCCVLVL 120

Query: 450 TKPTKGELAAEEQEKLESDFSQVVSDVSELTRGLF 554
           TKP KG++  EEQEKL++DFSQVV+DVSELT  LF
Sbjct: 121 TKPPKGDIGQEEQEKLKADFSQVVADVSELTSSLF 155


>ref|XP_002269703.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 2-like protein
           [Vitis vinifera] gi|147867156|emb|CAN80504.1|
           hypothetical protein VITISV_035185 [Vitis vinifera]
           gi|297734127|emb|CBI15374.3| unnamed protein product
           [Vitis vinifera]
          Length = 157

 Score =  252 bits (643), Expect = 7e-65
 Identities = 126/157 (80%), Positives = 142/157 (90%), Gaps = 2/157 (1%)
 Frame = +3

Query: 90  MGSDSETEKSSHKER--KKVQALAPIAKPLAGKKLSKKTLKLVRKAAESKCLKRGVKEVV 263
           MGSDSE E+S+HKE+  KK+ ALAPIAKPLAGKKL K+TLKL+R+AAE KCLKRGVKEVV
Sbjct: 1   MGSDSEAERSAHKEKEKKKLSALAPIAKPLAGKKLCKRTLKLIRRAAEHKCLKRGVKEVV 60

Query: 264 KSIRRGNKGLCIIAGNISPIDVITHVPILCEEADIPYVYVHSKEDLATAGATKRPTCCVL 443
           K IRRG+KG C+IAGNI+PIDVITHVPILCEEADIPYVYV SKEDLA AG+TKRPTCCVL
Sbjct: 61  KGIRRGDKGFCVIAGNITPIDVITHVPILCEEADIPYVYVPSKEDLANAGSTKRPTCCVL 120

Query: 444 VLTKPTKGELAAEEQEKLESDFSQVVSDVSELTRGLF 554
           VLTKPTKGEL  EEQEKL+++++QVVSDVS LT  LF
Sbjct: 121 VLTKPTKGELGQEEQEKLKAEYTQVVSDVSGLTSTLF 157


>ref|XP_002512015.1| H/ACA ribonucleoprotein complex subunit, putative [Ricinus
           communis] gi|223549195|gb|EEF50684.1| H/ACA
           ribonucleoprotein complex subunit, putative [Ricinus
           communis]
          Length = 157

 Score =  251 bits (641), Expect = 1e-64
 Identities = 128/157 (81%), Positives = 139/157 (88%), Gaps = 2/157 (1%)
 Frame = +3

Query: 90  MGSDSETEKSS--HKERKKVQALAPIAKPLAGKKLSKKTLKLVRKAAESKCLKRGVKEVV 263
           MGSDSE E+S    KE+KK+ AL+PIAKPLAGKKL K+TLKLVRKAAE KCLKRGVKEVV
Sbjct: 1   MGSDSEAERSHKHEKEKKKIIALSPIAKPLAGKKLCKRTLKLVRKAAEHKCLKRGVKEVV 60

Query: 264 KSIRRGNKGLCIIAGNISPIDVITHVPILCEEADIPYVYVHSKEDLATAGATKRPTCCVL 443
           KSIRRG+KGLC+IAGNISPIDVITHVPILCEEADIPYVYV SKEDLA AG TKRPTCCVL
Sbjct: 61  KSIRRGHKGLCVIAGNISPIDVITHVPILCEEADIPYVYVPSKEDLANAGVTKRPTCCVL 120

Query: 444 VLTKPTKGELAAEEQEKLESDFSQVVSDVSELTRGLF 554
           VLTKP KGE+  EEQEKL++DFSQV +DVSEL   LF
Sbjct: 121 VLTKPPKGEIPQEEQEKLKADFSQVAADVSELASSLF 157


>gb|AFK48249.1| unknown [Lotus japonicus]
          Length = 157

 Score =  250 bits (639), Expect = 2e-64
 Identities = 126/157 (80%), Positives = 141/157 (89%), Gaps = 2/157 (1%)
 Frame = +3

Query: 90  MGSDSETEKS--SHKERKKVQALAPIAKPLAGKKLSKKTLKLVRKAAESKCLKRGVKEVV 263
           MGSDSE EKS    KERKK+ A+APIAKPLAGKKL K+TLKLVR+AAE KCLKRGVKEVV
Sbjct: 1   MGSDSEGEKSVQKEKERKKLLAVAPIAKPLAGKKLCKRTLKLVRRAAEHKCLKRGVKEVV 60

Query: 264 KSIRRGNKGLCIIAGNISPIDVITHVPILCEEADIPYVYVHSKEDLATAGATKRPTCCVL 443
           KSIRRG+KGLC+IAGNISPIDVITHVP+LCEE+D+PYVYV SKEDLA+AGATKRPTCCVL
Sbjct: 61  KSIRRGHKGLCVIAGNISPIDVITHVPVLCEESDVPYVYVTSKEDLASAGATKRPTCCVL 120

Query: 444 VLTKPTKGELAAEEQEKLESDFSQVVSDVSELTRGLF 554
           VLTKP KGE+   EQEKL+SD+ QVVSDV+E+T  LF
Sbjct: 121 VLTKPAKGEMEKGEQEKLKSDYDQVVSDVTEITASLF 157