BLASTX nr result

ID: Cimicifuga21_contig00003790 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003790
         (988 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001154304.1| putative tyrosine-protein phosphatase [Arabi...    93   6e-20
ref|NP_171993.1| putative tyrosine-protein phosphatase [Arabidop...    93   6e-20
ref|XP_002331572.1| predicted protein [Populus trichocarpa] gi|2...    92   2e-19
pdb|1XRI|A Chain A, X-ray Structure Of A Putative Phosphoprotein...    91   3e-19
ref|XP_003545201.1| PREDICTED: probable tyrosine-protein phospha...    91   4e-19

>ref|NP_001154304.1| putative tyrosine-protein phosphatase [Arabidopsis thaliana]
           gi|332189657|gb|AEE27778.1| putative tyrosine-protein
           phosphatase [Arabidopsis thaliana]
          Length = 247

 Score = 93.2 bits (230), Expect(2) = 6e-20
 Identities = 40/47 (85%), Positives = 45/47 (95%)
 Frame = -1

Query: 856 VPPLNFSMVDNGIFRSGVPDSSNFDFLETLGLRSIVYLCPEPYPEAN 716
           +PPLNFSMVDNGIFRSG PDS+NF FL+TLGLRSI+YLCPEPYPE+N
Sbjct: 54  IPPLNFSMVDNGIFRSGFPDSANFSFLQTLGLRSIIYLCPEPYPESN 100



 Score = 31.2 bits (69), Expect(2) = 6e-20
 Identities = 14/20 (70%), Positives = 17/20 (85%)
 Frame = -2

Query: 717 MKCLKSNGIRPFQFGIDGCK 658
           ++ LKSNGIR FQFGI+G K
Sbjct: 101 LQFLKSNGIRLFQFGIEGNK 120


>ref|NP_171993.1| putative tyrosine-protein phosphatase [Arabidopsis thaliana]
           gi|73921030|sp|Q9ZVN4.1|Y1500_ARATH RecName:
           Full=Probable tyrosine-protein phosphatase At1g05000
           gi|4056425|gb|AAC97999.1| ESTs gb|H36249, gb|AA59732 and
           gb|AA651219 come from this gene [Arabidopsis thaliana]
           gi|28950701|gb|AAO63274.1| At1g05000 [Arabidopsis
           thaliana] gi|110736114|dbj|BAF00029.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|255957210|gb|ACU43461.1| PTP135 [Arabidopsis
           thaliana] gi|332189656|gb|AEE27777.1| putative
           tyrosine-protein phosphatase [Arabidopsis thaliana]
          Length = 215

 Score = 93.2 bits (230), Expect(2) = 6e-20
 Identities = 40/47 (85%), Positives = 45/47 (95%)
 Frame = -1

Query: 856 VPPLNFSMVDNGIFRSGVPDSSNFDFLETLGLRSIVYLCPEPYPEAN 716
           +PPLNFSMVDNGIFRSG PDS+NF FL+TLGLRSI+YLCPEPYPE+N
Sbjct: 54  IPPLNFSMVDNGIFRSGFPDSANFSFLQTLGLRSIIYLCPEPYPESN 100



 Score = 31.2 bits (69), Expect(2) = 6e-20
 Identities = 14/20 (70%), Positives = 17/20 (85%)
 Frame = -2

Query: 717 MKCLKSNGIRPFQFGIDGCK 658
           ++ LKSNGIR FQFGI+G K
Sbjct: 101 LQFLKSNGIRLFQFGIEGNK 120


>ref|XP_002331572.1| predicted protein [Populus trichocarpa] gi|222873796|gb|EEF10927.1|
           predicted protein [Populus trichocarpa]
          Length = 207

 Score = 92.0 bits (227), Expect(2) = 2e-19
 Identities = 41/49 (83%), Positives = 46/49 (93%)
 Frame = -1

Query: 862 LSVPPLNFSMVDNGIFRSGVPDSSNFDFLETLGLRSIVYLCPEPYPEAN 716
           L VPPLNF+MVDNGIFRSG PDS+NF FL++LGLRSI+YLCPEPYPEAN
Sbjct: 40  LLVPPLNFAMVDNGIFRSGFPDSANFSFLQSLGLRSILYLCPEPYPEAN 88



 Score = 30.4 bits (67), Expect(2) = 2e-19
 Identities = 13/17 (76%), Positives = 14/17 (82%)
 Frame = -2

Query: 708 LKSNGIRPFQFGIDGCK 658
           LK NGIR FQFGI+ CK
Sbjct: 92  LKDNGIRIFQFGIEMCK 108


>pdb|1XRI|A Chain A, X-ray Structure Of A Putative Phosphoprotein Phosphatase
           From Arabidopsis Thaliana Gene At1g05000
           gi|56554690|pdb|1XRI|B Chain B, X-ray Structure Of A
           Putative Phosphoprotein Phosphatase From Arabidopsis
           Thaliana Gene At1g05000 gi|150261477|pdb|2Q47|A Chain A,
           Ensemble Refinement Of The Protein Crystal Structure Of
           A Putative Phosphoprotein Phosphatase From Arabidopsis
           Thaliana Gene At1g05000 gi|150261478|pdb|2Q47|B Chain B,
           Ensemble Refinement Of The Protein Crystal Structure Of
           A Putative Phosphoprotein Phosphatase From Arabidopsis
           Thaliana Gene At1g05000
          Length = 151

 Score = 90.9 bits (224), Expect(2) = 3e-19
 Identities = 39/47 (82%), Positives = 44/47 (93%)
 Frame = -1

Query: 856 VPPLNFSMVDNGIFRSGVPDSSNFDFLETLGLRSIVYLCPEPYPEAN 716
           +PPLNFS VDNGIFRSG PDS+NF FL+TLGLRSI+YLCPEPYPE+N
Sbjct: 3   IPPLNFSXVDNGIFRSGFPDSANFSFLQTLGLRSIIYLCPEPYPESN 49



 Score = 31.2 bits (69), Expect(2) = 3e-19
 Identities = 14/20 (70%), Positives = 17/20 (85%)
 Frame = -2

Query: 717 MKCLKSNGIRPFQFGIDGCK 658
           ++ LKSNGIR FQFGI+G K
Sbjct: 50  LQFLKSNGIRLFQFGIEGNK 69


>ref|XP_003545201.1| PREDICTED: probable tyrosine-protein phosphatase At1g05000-like
           [Glycine max]
          Length = 216

 Score = 90.5 bits (223), Expect(2) = 4e-19
 Identities = 39/49 (79%), Positives = 45/49 (91%)
 Frame = -1

Query: 862 LSVPPLNFSMVDNGIFRSGVPDSSNFDFLETLGLRSIVYLCPEPYPEAN 716
           L +PPLNF+MVDNGIFRSG P+ +NF FL+TLGLRSI+YLCPEPYPEAN
Sbjct: 51  LFIPPLNFAMVDNGIFRSGFPEPANFSFLQTLGLRSIIYLCPEPYPEAN 99



 Score = 31.2 bits (69), Expect(2) = 4e-19
 Identities = 14/20 (70%), Positives = 17/20 (85%)
 Frame = -2

Query: 717 MKCLKSNGIRPFQFGIDGCK 658
           M+ LKSNGI+ FQFGI+G K
Sbjct: 100 MEFLKSNGIKLFQFGIEGHK 119