BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003779
         (615 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534512.1| conserved hypothetical protein [Ricinus comm...   112   7e-23
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...   108   1e-21
ref|XP_004140601.1| PREDICTED: F-box protein At3g07870-like [Cuc...   107   2e-21
ref|XP_002532277.1| conserved hypothetical protein [Ricinus comm...   105   6e-21
ref|NP_566322.1| F-box protein [Arabidopsis thaliana] gi|7526578...   104   1e-20

>ref|XP_002534512.1| conserved hypothetical protein [Ricinus communis]
           gi|223525141|gb|EEF27869.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 383

 Score =  112 bits (279), Expect = 7e-23
 Identities = 66/197 (33%), Positives = 100/197 (50%), Gaps = 8/197 (4%)
 Frame = -1

Query: 612 LCLSSFFHNNDVTIVISNPFTRETVWLPRPNLPFEYGNGTCGLGYHPRTKEYKVLVFLYL 433
           LCL    H N  T  + NPFT   + LP  N P +      G G+ P  K+YKVL   Y+
Sbjct: 114 LCLYDSLHKN--TFYMYNPFTNSCMELPISNFPSDVWT-VLGFGFDPVRKKYKVLKVSYI 170

Query: 432 EGSNDCH--------KVMAQVHTLGSTSWRTKGEVPSTIMWRPFNVLVNGALHWLAFYPK 277
             +N+          +   Q+ T+GS SWR+ GE P   +  P  V VNG LHW+ +  +
Sbjct: 171 RRTNNTAGERYGLSLRSEVQILTVGSPSWRSLGETPYYPIHSPSQVYVNGRLHWVNWPVR 230

Query: 276 YSKNLAITSFDIGDEEFRVLPIPLESRLVDKWQYKQVQELGGFLSFVDFSSRDRVDIWVM 97
           Y     + SFD+ DE+FR +P+P    +  KW    +  +   LS   + +    ++WVM
Sbjct: 231 YRPGRKLISFDLEDEKFREVPLPGSDGI--KWGDYMLVVIRDCLSAAVYRNYGSFEVWVM 288

Query: 96  KHYGVEQSWNKQFVVPI 46
           K YG+++SW K+F + +
Sbjct: 289 KDYGLKESWIKEFSIGV 305


>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
           gi|147785390|emb|CAN68678.1| hypothetical protein
           VITISV_041941 [Vitis vinifera]
          Length = 409

 Score =  108 bits (269), Expect = 1e-21
 Identities = 69/195 (35%), Positives = 101/195 (51%), Gaps = 9/195 (4%)
 Frame = -1

Query: 615 LLCLSSFFHNNDVTIVISNPFTRETVWLPRPNLPFEYGNGTCGLGYHPRTKEYKVLVFLY 436
           LLCL+     +   + + NPFTR+   LP+ +L +       G GYHP T+ YKV+  +Y
Sbjct: 131 LLCLADSLFKD--AVYVHNPFTRDFKQLPK-SLQYPDQEVVFGFGYHPMTEVYKVVKVVY 187

Query: 435 LEGSND---------CHKVMAQVHTLGSTSWRTKGEVPSTIMWRPFNVLVNGALHWLAFY 283
                          C +   QV TLGS +WR+ G+V   +   P   LVNG LHW+   
Sbjct: 188 YRNGYGGFSRFRRITCSQSEVQVLTLGSPTWRSLGKVSYQLDRWPSEALVNGRLHWVTRP 247

Query: 282 PKYSKNLAITSFDIGDEEFRVLPIPLESRLVDKWQYKQVQELGGFLSFVDFSSRDRVDIW 103
            +Y     I SFD+ DE+FR +P P +   + +  Y  +  LGG LS     S  ++++W
Sbjct: 248 RRYVTRF-IVSFDLADEQFREIPKP-DCGGLSRCNY-HLLVLGGCLSAAVHRSNGKLEVW 304

Query: 102 VMKHYGVEQSWNKQF 58
           VMK Y V++SW K+F
Sbjct: 305 VMKEYDVKESWIKEF 319


>ref|XP_004140601.1| PREDICTED: F-box protein At3g07870-like [Cucumis sativus]
           gi|449519392|ref|XP_004166719.1| PREDICTED: F-box
           protein At3g07870-like [Cucumis sativus]
          Length = 375

 Score =  107 bits (267), Expect = 2e-21
 Identities = 65/189 (34%), Positives = 101/189 (53%), Gaps = 4/189 (2%)
 Frame = -1

Query: 612 LCLSSFFHNNDVTIVISNPFTRETVWLPRPNLPFEYGNGTCGLGYHPRTKEYKVLVFLYL 433
           LCLS   +N +  + I NPFTR+ + LP+    F   +   G+G+HP+TK  K+L  +Y 
Sbjct: 102 LCLSDSLYNEN--LFIYNPFTRDYLELPKSK-DFSNPDVVYGIGFHPQTKRLKILKIVYS 158

Query: 432 EG----SNDCHKVMAQVHTLGSTSWRTKGEVPSTIMWRPFNVLVNGALHWLAFYPKYSKN 265
           +G        H    QV TLG+++WR+ G +   +        +NG LHW++   ++   
Sbjct: 159 KGFRRIQRRFHHSEVQVFTLGTSNWRSIGRIFHHLAQGQSPAAINGRLHWVSLPRRHYVG 218

Query: 264 LAITSFDIGDEEFRVLPIPLESRLVDKWQYKQVQELGGFLSFVDFSSRDRVDIWVMKHYG 85
             I SFD+  EEF  +P P    L  +  + Q+  L   LS V + S  +++IWVM+ YG
Sbjct: 219 RTIVSFDLASEEFIDIPKPDYGSL-SRCNF-QLMNLNDCLSAVVYCSYGKMEIWVMEQYG 276

Query: 84  VEQSWNKQF 58
           V++SW K F
Sbjct: 277 VKESWVKSF 285


>ref|XP_002532277.1| conserved hypothetical protein [Ricinus communis]
           gi|223528011|gb|EEF30092.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 410

 Score =  105 bits (262), Expect = 6e-21
 Identities = 68/187 (36%), Positives = 98/187 (52%), Gaps = 13/187 (6%)
 Frame = -1

Query: 567 ISNPFTRETVWLPRPNLPFEYGNGTCGLGYHPRTKEYKVLVFLYL-----EGSN------ 421
           I NPFT + + LP P           G G+H  TKEYKV+  +Y      EG+N      
Sbjct: 140 IYNPFTSDYLELPEPGQVLNQHRVATGFGFHSTTKEYKVVRVVYYRNNKEEGTNFQKRRY 199

Query: 420 DCHKVMAQVHTLG--STSWRTKGEVPSTIMWRPFNVLVNGALHWLAFYPKYSKNLAITSF 247
              +   QV T+G  S +WR+KGE    ++  P +V+VNG LHWL+   +      + SF
Sbjct: 200 SLPRSEVQVLTVGNGSLTWRSKGETSYQLLGNPSHVVVNGRLHWLSCRYRNQSLRRLISF 259

Query: 246 DIGDEEFRVLPIPLESRLVDKWQYKQVQELGGFLSFVDFSSRDRVDIWVMKHYGVEQSWN 67
           D+ DE+FR +P P+ +       +  +  L G LS V    R R+ IWVMK YGV++SW 
Sbjct: 260 DLADEQFREVPCPVGASFGRHCSH--LATLRGCLSGVVQGFR-RLYIWVMKEYGVKESWV 316

Query: 66  KQFVVPI 46
           K+F + +
Sbjct: 317 KEFTIGV 323


>ref|NP_566322.1| F-box protein [Arabidopsis thaliana]
           gi|75265789|sp|Q9SFC7.1|FB135_ARATH RecName: Full=F-box
           protein At3g07870 gi|6648199|gb|AAF21197.1|AC013483_21
           unknown protein [Arabidopsis thaliana]
           gi|15983479|gb|AAL11607.1|AF424614_1 AT3g07870/F17A17_21
           [Arabidopsis thaliana] gi|109134141|gb|ABG25068.1|
           At3g07870 [Arabidopsis thaliana]
           gi|332641092|gb|AEE74613.1| F-box protein [Arabidopsis
           thaliana]
          Length = 417

 Score =  104 bits (260), Expect = 1e-20
 Identities = 67/207 (32%), Positives = 108/207 (52%), Gaps = 19/207 (9%)
 Frame = -1

Query: 615 LLCLSSFFHNNDVTIVISNPFTRETVWLPRPNLPFEYGNGTCGLGYHPRTKEYKVLVFLY 436
           LLCLS   +N+  ++ + NPFT  ++ LP  +  +       G G+H  TKEYKVL  +Y
Sbjct: 126 LLCLSDSLYND--SLYLYNPFTTNSLELPECSNKYHDQELVFGFGFHEMTKEYKVLKIVY 183

Query: 435 LEGSNDCHKVM-------------AQVHTLGST------SWRTKGEVPSTIMWRPFNVLV 313
             GS+  +  +              Q+ TL S       SWR+ G+ P   + R    LV
Sbjct: 184 FRGSSSNNNGIYRGRGRIQYKQSEVQILTLSSKTTDQSLSWRSLGKAPYKFVKRSSEALV 243

Query: 312 NGALHWLAFYPKYSKNLAITSFDIGDEEFRVLPIPLESRLVDKWQYKQVQELGGFLSFVD 133
           NG LH++    ++  +    SFD+ DEEF+ +P P +   +++  ++ V  L G L  V 
Sbjct: 244 NGRLHFVTRPRRHVPDRKFVSFDLEDEEFKEIPKP-DCGGLNRTNHRLV-NLKGCLCAVV 301

Query: 132 FSSRDRVDIWVMKHYGVEQSWNKQFVV 52
           + +  ++DIWVMK YGV++SW K++ +
Sbjct: 302 YGNYGKLDIWVMKTYGVKESWGKEYSI 328