BLASTX nr result

ID: Cimicifuga21_contig00003734 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003734
         (492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327906.1| predicted protein [Populus trichocarpa] gi|2...    70   1e-10
ref|XP_002277029.1| PREDICTED: 26S proteasome non-ATPase regulat...    69   3e-10
gb|AFK39618.1| unknown [Lotus japonicus]                               69   4e-10
ref|XP_003539943.1| PREDICTED: 26S proteasome non-ATPase regulat...    69   4e-10
ref|XP_003527419.1| PREDICTED: 26S proteasome non-ATPase regulat...    69   4e-10

>ref|XP_002327906.1| predicted protein [Populus trichocarpa] gi|222837315|gb|EEE75694.1|
           predicted protein [Populus trichocarpa]
          Length = 890

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 32/36 (88%), Positives = 36/36 (100%)
 Frame = +3

Query: 3   LAAGDRAELATEKYLPLTPILEGFVILKKNPDYRDD 110
           LAAGDRAELATEKY+PL+PILEGFVILK+NPDYR+D
Sbjct: 854 LAAGDRAELATEKYIPLSPILEGFVILKENPDYRED 889


>ref|XP_002277029.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 1A [Vitis
           vinifera] gi|302143338|emb|CBI21899.3| unnamed protein
           product [Vitis vinifera]
          Length = 890

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 31/36 (86%), Positives = 36/36 (100%)
 Frame = +3

Query: 3   LAAGDRAELATEKYLPLTPILEGFVILKKNPDYRDD 110
           LAAGDRAELATEKY+P++PILEGFVILK+NPDYR+D
Sbjct: 854 LAAGDRAELATEKYIPVSPILEGFVILKENPDYRED 889


>gb|AFK39618.1| unknown [Lotus japonicus]
          Length = 85

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 31/36 (86%), Positives = 36/36 (100%)
 Frame = +3

Query: 3   LAAGDRAELATEKYLPLTPILEGFVILKKNPDYRDD 110
           LAAGDRAELATEKY+PL+PILEGFVILK+NPDYR++
Sbjct: 50  LAAGDRAELATEKYIPLSPILEGFVILKENPDYREE 85


>ref|XP_003539943.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 1A-like
           [Glycine max]
          Length = 885

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 31/36 (86%), Positives = 36/36 (100%)
 Frame = +3

Query: 3   LAAGDRAELATEKYLPLTPILEGFVILKKNPDYRDD 110
           LAAGDRAELATEKY+PL+PILEGFVILK+NPDYR++
Sbjct: 850 LAAGDRAELATEKYIPLSPILEGFVILKENPDYREE 885


>ref|XP_003527419.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 1A-like
           [Glycine max]
          Length = 885

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 31/36 (86%), Positives = 36/36 (100%)
 Frame = +3

Query: 3   LAAGDRAELATEKYLPLTPILEGFVILKKNPDYRDD 110
           LAAGDRAELATEKY+PL+PILEGFVILK+NPDYR++
Sbjct: 850 LAAGDRAELATEKYIPLSPILEGFVILKENPDYREE 885


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