BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003732
         (1721 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284867.1| PREDICTED: UBX domain-containing protein 6 [...   370   e-100
emb|CAN79664.1| hypothetical protein VITISV_031014 [Vitis vinifera]   368   2e-99
ref|XP_002525983.1| nucleic acid binding protein, putative [Rici...   367   5e-99
ref|XP_003630914.1| UBX domain-containing protein [Medicago trun...   362   2e-97
ref|XP_004162868.1| PREDICTED: UBX domain-containing protein 6-l...   356   1e-95

>ref|XP_002284867.1| PREDICTED: UBX domain-containing protein 6 [Vitis vinifera]
          Length = 474

 Score =  370 bits (949), Expect = e-100
 Identities = 199/305 (65%), Positives = 236/305 (77%), Gaps = 3/305 (0%)
 Frame = +3

Query: 522  VSAFVSGGTS---VDVVLKLLKNIIKEPENPKFRKIRLSNPKIREAIVEVAGGVELLECV 692
            V  F+SG  S   V+VVLKLL+NI KEP N KFR+IR+ NPKIREAI EV GGVELLECV
Sbjct: 175  VGVFLSGKPSEGSVEVVLKLLRNIAKEPGNAKFRRIRMGNPKIREAISEVVGGVELLECV 234

Query: 693  GFKLQEEGGEMWAVVIDVPCDEQISLIKEAVSLLDPELPAGIFVRRSLELEETPSSVGIS 872
            GF+L+EEGGEMWAV+     D  I LI  AVSLL+P+           ++E + S V   
Sbjct: 235  GFQLREEGGEMWAVMESATKDH-IVLINMAVSLLEPQ-----------KMENSSSPVS-- 280

Query: 873  PSTTVDEPELPERIDRQVRVFFSAGESTAEKVDMPDSFYTLSASELKREADARRKQIAES 1052
             +  V+EP   +++DRQ+RVFFS  ES A K+++PDSF+ LS  ELKREADAR+K+IAES
Sbjct: 281  -AADVEEPVELKKVDRQIRVFFSVPESVAAKIELPDSFFNLSIGELKREADARKKKIAES 339

Query: 1053 QLLIPKSYKEKKAKDARKRYKTTVIRIQFPDEVVLQGVFLPWEPTTALYEFVSSSLKEPC 1232
            QLLIPKSYKEK+AK AR+RY  TVIR+QFPD VVLQGVF PWEPT+ALYEFVSS+LKEPC
Sbjct: 340  QLLIPKSYKEKQAKIARRRYTKTVIRVQFPDGVVLQGVFSPWEPTSALYEFVSSALKEPC 399

Query: 1233 LEFELSRPAVPKPRVIPRFPSSRQRTPTLEDEELVPSALIKFKPIETDSIVFTGLSNELL 1412
            LEF+L  P V K RVIP FP++  R  TL++EELVPSALIKFKPIETDS+VFTGL NELL
Sbjct: 400  LEFDLLHPVVIKRRVIPHFPAAGDRATTLDEEELVPSALIKFKPIETDSVVFTGLRNELL 459

Query: 1413 QISEP 1427
            +ISEP
Sbjct: 460  EISEP 464


>emb|CAN79664.1| hypothetical protein VITISV_031014 [Vitis vinifera]
          Length = 474

 Score =  368 bits (945), Expect = 2e-99
 Identities = 198/305 (64%), Positives = 235/305 (77%), Gaps = 3/305 (0%)
 Frame = +3

Query: 522  VSAFVSGGTS---VDVVLKLLKNIIKEPENPKFRKIRLSNPKIREAIVEVAGGVELLECV 692
            V  F+SG  S   V+VVLKLL+NI KEP N KFR+IR+ NPKIREAI EV GGVELLECV
Sbjct: 175  VGVFLSGKPSEGSVEVVLKLLRNIAKEPGNAKFRRIRMGNPKIREAISEVVGGVELLECV 234

Query: 693  GFKLQEEGGEMWAVVIDVPCDEQISLIKEAVSLLDPELPAGIFVRRSLELEETPSSVGIS 872
            GF+L+EEGGEMWAV+     D  I LI  AVSLL+P+           ++E + S V   
Sbjct: 235  GFQLREEGGEMWAVMESATKDH-IVLINMAVSLLEPQ-----------KMENSSSPVS-- 280

Query: 873  PSTTVDEPELPERIDRQVRVFFSAGESTAEKVDMPDSFYTLSASELKREADARRKQIAES 1052
                V+EP + +++DRQ+RVFFS  ES A K+++PDSF+ LS  ELKREADAR+K+IAES
Sbjct: 281  -EADVEEPVVLKKVDRQIRVFFSVPESVAAKIELPDSFFNLSIGELKREADARKKKIAES 339

Query: 1053 QLLIPKSYKEKKAKDARKRYKTTVIRIQFPDEVVLQGVFLPWEPTTALYEFVSSSLKEPC 1232
            QLLIPKSYKEK+AK AR+RY  TVIR+QFPD VVLQGVF  WEPT+ALYEFVSS+LKEPC
Sbjct: 340  QLLIPKSYKEKQAKIARRRYTKTVIRVQFPDGVVLQGVFASWEPTSALYEFVSSALKEPC 399

Query: 1233 LEFELSRPAVPKPRVIPRFPSSRQRTPTLEDEELVPSALIKFKPIETDSIVFTGLSNELL 1412
            LEF+L  P V K RVIP FP++  R  TL++EELVPSALIKFKPIETDS+VFTGL NELL
Sbjct: 400  LEFDLLHPVVIKRRVIPHFPAAGDRATTLDEEELVPSALIKFKPIETDSVVFTGLRNELL 459

Query: 1413 QISEP 1427
            +ISEP
Sbjct: 460  EISEP 464


>ref|XP_002525983.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223534715|gb|EEF36407.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 470

 Score =  367 bits (942), Expect = 5e-99
 Identities = 194/306 (63%), Positives = 243/306 (79%), Gaps = 3/306 (0%)
 Frame = +3

Query: 519  CVSAFVSGGT---SVDVVLKLLKNIIKEPENPKFRKIRLSNPKIREAIVEVAGGVELLEC 689
            CVSA++SG     S +VVL+L  NI+KEPEN KFRKIR+SNPKIREA+ EVAG VELLE 
Sbjct: 172  CVSAYISGKPREGSAEVVLRLFTNIVKEPENAKFRKIRMSNPKIREAVSEVAGAVELLEF 231

Query: 690  VGFKLQEEGGEMWAVVIDVPCDEQISLIKEAVSLLDPELPAGIFVRRSLELEETPSSVGI 869
            +GF+L+EE GEMWA + +VP +E++ LI + + LL+P        R+ ++ E+ PS   +
Sbjct: 232  IGFELREEVGEMWAFM-EVPDEERVRLINKVIRLLEPRK----IERQVVKAEDKPS---V 283

Query: 870  SPSTTVDEPELPERIDRQVRVFFSAGESTAEKVDMPDSFYTLSASELKREADARRKQIAE 1049
            +P+ T ++ E P++IDRQ+RVFFS  ES A K+++PDSFY LS  ELKREADAR+K+IA+
Sbjct: 284  APAGTEEQVE-PKKIDRQIRVFFSVPESVAAKIELPDSFYNLSQEELKREADARKKKIAD 342

Query: 1050 SQLLIPKSYKEKKAKDARKRYKTTVIRIQFPDEVVLQGVFLPWEPTTALYEFVSSSLKEP 1229
            SQLLIPKSYKEK+A+ AR+RYK T+IRIQFPD VVLQGVF PWEPT+ALYEFVS+SLK+P
Sbjct: 343  SQLLIPKSYKEKQAQAARRRYKRTLIRIQFPDGVVLQGVFAPWEPTSALYEFVSTSLKDP 402

Query: 1230 CLEFELSRPAVPKPRVIPRFPSSRQRTPTLEDEELVPSALIKFKPIETDSIVFTGLSNEL 1409
             LEFEL  P + K RV+P FPS  QR  TLEDE+LVPSALIKF+P ETDS VFTGL +EL
Sbjct: 403  SLEFELLDPILIKRRVLPHFPSGGQRASTLEDEDLVPSALIKFRPKETDSSVFTGLCDEL 462

Query: 1410 LQISEP 1427
            L+ISEP
Sbjct: 463  LEISEP 468


>ref|XP_003630914.1| UBX domain-containing protein [Medicago truncatula]
            gi|355524936|gb|AET05390.1| UBX domain-containing protein
            [Medicago truncatula]
          Length = 463

 Score =  362 bits (928), Expect = 2e-97
 Identities = 184/308 (59%), Positives = 240/308 (77%), Gaps = 5/308 (1%)
 Frame = +3

Query: 519  CVSAFVSGGTS---VDVVLKLLKNIIKEPENPKFRKIRLSNPKIREAIVEVAGGVELLEC 689
            C+  +VSG  S   VD+VLKLL+NI+KEP+N KFRKIR+ NPKI+EAI EV GGVELL  
Sbjct: 164  CIGTYVSGNPSQGSVDIVLKLLRNIVKEPDNVKFRKIRMGNPKIKEAIGEVIGGVELLSL 223

Query: 690  VGFKLQEEGGEMWAVVIDVPCDEQISLIKEAVSLLDPELPAGIFVRRSLELEETPSSVGI 869
            +GF+L+EE GE WA++ +VP +E+++LIK+A+ LL+P+L           +++TP     
Sbjct: 224  LGFELKEENGETWALM-EVPTEEKVNLIKKAIVLLEPQL-----------VQDTPKRENS 271

Query: 870  SPSTTVDE--PELPERIDRQVRVFFSAGESTAEKVDMPDSFYTLSASELKREADARRKQI 1043
            +P+ + ++     P++IDRQV+VFF+  ES A ++++PDSFY  SA E++REA+ RRK+I
Sbjct: 272  TPTVSTEKVAEAEPKKIDRQVKVFFAVSESVAARIELPDSFYKRSAEEVRREAELRRKKI 331

Query: 1044 AESQLLIPKSYKEKKAKDARKRYKTTVIRIQFPDEVVLQGVFLPWEPTTALYEFVSSSLK 1223
             ESQLLIPKS KEK+AK A++RY  T+IRIQFPD VVLQGVF PWEPTTALYEFVSS+LK
Sbjct: 332  EESQLLIPKSLKEKQAKAAKRRYTRTIIRIQFPDGVVLQGVFAPWEPTTALYEFVSSALK 391

Query: 1224 EPCLEFELSRPAVPKPRVIPRFPSSRQRTPTLEDEELVPSALIKFKPIETDSIVFTGLSN 1403
            E CLEFEL  P V + RVIP FP + Q+  T+E+E+LVPSALIKFKP+ETDS+VFTGL N
Sbjct: 392  ESCLEFELMHPVVVQRRVIPCFPKAGQKAKTIEEEDLVPSALIKFKPLETDSVVFTGLKN 451

Query: 1404 ELLQISEP 1427
            ELL+ISEP
Sbjct: 452  ELLEISEP 459


>ref|XP_004162868.1| PREDICTED: UBX domain-containing protein 6-like [Cucumis sativus]
          Length = 472

 Score =  356 bits (913), Expect = 1e-95
 Identities = 185/315 (58%), Positives = 234/315 (74%), Gaps = 3/315 (0%)
 Frame = +3

Query: 519  CVSAFVSGGT---SVDVVLKLLKNIIKEPENPKFRKIRLSNPKIREAIVEVAGGVELLEC 689
            C+  F+SG     S+D+VLKLL+NI++EPEN KFRKIRLSNPKI+EAI E  GGVELLE 
Sbjct: 171  CIGTFLSGKPTQGSLDIVLKLLRNIVREPENSKFRKIRLSNPKIKEAIGEAVGGVELLEF 230

Query: 690  VGFKLQEEGGEMWAVVIDVPCDEQISLIKEAVSLLDPELPAGIFVRRSLELEETPSSVGI 869
            VGFKLQEE GEMWA + +VP +EQI+L+ + + L+D             +LEE       
Sbjct: 231  VGFKLQEEDGEMWATM-EVPTEEQINLLCKVIDLIDQP-----------KLEEQQKKAST 278

Query: 870  SPSTTVDEPELPERIDRQVRVFFSAGESTAEKVDMPDSFYTLSASELKREADARRKQIAE 1049
            +P         P+++DRQ+RVFF+  E+ A K+++PDSFY LS  E+KREA  R+++IAE
Sbjct: 279  APDLIE-----PKKVDRQIRVFFAVPENIAAKIELPDSFYRLSVEEVKREAIMRKQKIAE 333

Query: 1050 SQLLIPKSYKEKKAKDARKRYKTTVIRIQFPDEVVLQGVFLPWEPTTALYEFVSSSLKEP 1229
            SQLL+PKSYKEK+AK AR++Y  TVIRIQFPD VVLQGVF PWEPT+ALYEFVS++LKEP
Sbjct: 334  SQLLVPKSYKEKQAKAARRKYTRTVIRIQFPDGVVLQGVFSPWEPTSALYEFVSTALKEP 393

Query: 1230 CLEFELSRPAVPKPRVIPRFPSSRQRTPTLEDEELVPSALIKFKPIETDSIVFTGLSNEL 1409
            CLEFEL  P   K R I  FP+  +++ TL+DEELVPSAL+KF+PIETDS+VFTGL NEL
Sbjct: 394  CLEFELIHPVGVKRRTIAHFPAEGEKSKTLDDEELVPSALVKFRPIETDSVVFTGLRNEL 453

Query: 1410 LQISEPK*SSGSIIP 1454
            L+I EP  S  ++ P
Sbjct: 454  LEIIEPLVSGSAVAP 468