BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003693
         (1019 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medica...    70   1e-09
gb|ABD28730.1| Ribonuclease H [Medicago truncatula]                    60   1e-06
ref|XP_002314708.1| predicted protein [Populus trichocarpa] gi|2...    59   1e-06
ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2...    59   1e-06
ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    59   2e-06

>ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula]
            gi|355496705|gb|AES77908.1| Cytochrome c biogenesis
            protein ccsA [Medicago truncatula]
          Length = 666

 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 29/80 (36%), Positives = 47/80 (58%)
 Frame = -2

Query: 1012 TVKAALEAIRTRANAVLWHRCVWGGHLHSNMEAIAWKLVHNRVPTDDRIMRAGIHIASQC 833
            T + A + I    N VLW + +W  ++  +   I W+L+HN++PTD+ + + G  I S C
Sbjct: 19   TNQLAYKFINETGNHVLWDKFLWNSYIPPSRSFITWRLLHNKLPTDENLRKRGCLIVSIC 78

Query: 832  SFCKRATESLEHIL*QCRVT 773
             FC ++ ES +HI  +C VT
Sbjct: 79   CFCMKSAESSQHIFFECHVT 98


>gb|ABD28730.1| Ribonuclease H [Medicago truncatula]
          Length = 409

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
 Frame = -2

Query: 1006 KAALEAIRTRANAVLWHRCVWGGHLHSNMEAIAWKLVHNRVPTDDRIMRAGIHIAS-QCS 830
            K A   +      V W + +W  +       I W+ +HN++PTDD + + G +I S  C 
Sbjct: 56   KLAFSFLPGHGPTVHWAKMLWNAYTPPTGAFITWRFLHNKLPTDDNLRKRGCYIVSICCC 115

Query: 829  FCKRATESLEHIL*QCRVTMHWLHDEFNFNMRNMELRSIIN 707
            FC++  E+  HI  QC VT+           ++++  SI+N
Sbjct: 116  FCRKQAETSSHIFLQCPVTLQLWDWLLKATDQHLDFSSILN 156



 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 45/169 (26%), Positives = 75/169 (44%), Gaps = 2/169 (1%)
 Frame = -3

Query: 579 SNSIHDVCLLTKFGIGCKPRKADRIKEVTWYPPTETEVKANVDGASQGNPGASGIGVVFQ 400
           ++S+ D  L   F I  K  + +  +E+ W PP    +K N DG+  G+P    IGV+F+
Sbjct: 216 ASSMQDFKLARLFSIPFKTNRVNPCREIIWVPPHGGCMKINCDGSVVGSPSCGSIGVIFR 275

Query: 399 NRKSEFLGYLAQWAGFSSNFQAECLATVVAWRQQWSSNSPSCGLNRTRWRRCSISRISGY 220
             ++ F G  AQ  G+++  +AE  A + A        +    L        S++ I  +
Sbjct: 276 ASQTMFCGAFAQNIGYATALEAEYSACMFA-----IEKAKELHLTNIWIETDSVNVIRAF 330

Query: 219 HGRLEQGSFFLVIRTRFLKSKNYSRTWRIF--HTSREGHFAADAASKKG 79
           H           +  R+     + R+ R    H +REG+  ADA +K G
Sbjct: 331 HFNT---GVPWKMHIRWHNCLLFCRSIRSLCTHVNREGNLVADALAKNG 376


>ref|XP_002314708.1| predicted protein [Populus trichocarpa] gi|222863748|gb|EEF00879.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 39/148 (26%), Positives = 70/148 (47%)
 Frame = -3

Query: 522 RKADRIKEVTWYPPTETEVKANVDGASQGNPGASGIGVVFQNRKSEFLGYLAQWAGFSSN 343
           R +    +V W  P E  +K NVDG S+GNPG +G G V ++    ++G  A+  G  S+
Sbjct: 66  RSSKEDTQVGWKYPQEERIKLNVDGCSKGNPGVAGAGGVIRDHLGAWIGGFARNIGICSS 125

Query: 342 FQAECLATVVAWRQQWSSNSPSCGLNRTRWRRCSISRISGYHGRLEQGSFFLVIRTRFLK 163
             AE  A  V  +  W        L      +  +  I+G   R+++ ++ ++++ + + 
Sbjct: 126 VNAELWAVYVGLQLAWDRGFRKVDLESD--SKVVVGLINGDSVRVDR-NYNIIMQIKGML 182

Query: 162 SKNYSRTWRIFHTSREGHFAADAASKKG 79
            +N+  T   +H  RE +  AD  +  G
Sbjct: 183 GRNWEVT--TYHVYREANCVADWLANYG 208


>ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1|
            predicted protein [Populus trichocarpa]
          Length = 331

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 27/82 (32%), Positives = 42/82 (51%)
 Frame = -2

Query: 1018 KFTVKAALEAIRTRANAVLWHRCVWGGHLHSNMEAIAWKLVHNRVPTDDRIMRAGIHIAS 839
            +F+VK A E +R   + V WH  VW  +       + W +V  ++ T D++ R GIH  +
Sbjct: 141  RFSVKVAWEQLRRHRHMVEWHDIVWFKNAVPRHSFLLWMVVQQKLTTQDKLHRFGIHGPN 200

Query: 838  QCSFCKRATESLEHIL*QCRVT 773
            +CS C R  E   H+  +C  T
Sbjct: 201  RCSLCLRNNEDHNHLFFECSYT 222


>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
            predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 27/82 (32%), Positives = 41/82 (50%)
 Frame = -2

Query: 1018 KFTVKAALEAIRTRANAVLWHRCVWGGHLHSNMEAIAWKLVHNRVPTDDRIMRAGIHIAS 839
            +F+VK A E +R     V WH  VW  +       + W +V  ++ T D++ R GIH  +
Sbjct: 856  RFSVKVAWEQLRRHRQLVEWHDIVWFKNAVPRHSFLLWMVVQQKLTTQDKLHRFGIHGPN 915

Query: 838  QCSFCKRATESLEHIL*QCRVT 773
            +CS C R  E   H+  +C  T
Sbjct: 916  RCSLCLRNNEDHNHLFFECSYT 937