BLASTX nr result
ID: Cimicifuga21_contig00003689
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00003689
(1753 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002509556.1| 26S proteasome regulatory subunit S3, putati... 560 e-157
ref|XP_002263731.1| PREDICTED: COP9 signalosome complex subunit ... 540 e-151
ref|XP_003524625.1| PREDICTED: COP9 signalosome complex subunit ... 538 e-150
ref|XP_003524624.1| PREDICTED: COP9 signalosome complex subunit ... 536 e-150
ref|XP_002300091.1| predicted protein [Populus trichocarpa] gi|2... 533 e-149
>ref|XP_002509556.1| 26S proteasome regulatory subunit S3, putative [Ricinus communis]
gi|223549455|gb|EEF50943.1| 26S proteasome regulatory
subunit S3, putative [Ricinus communis]
Length = 427
Score = 560 bits (1444), Expect = e-157
Identities = 287/434 (66%), Positives = 340/434 (78%)
Frame = -3
Query: 1691 SLEALVVQIQGLSDSDEDIAHLHKRLVVAEEKGLLNGSASRLASVLDQLDPSQHSLGYLY 1512
S+E+LV QIQGLS S DI+ LH L A++ L + S +RL LDQLDPS HSLGYLY
Sbjct: 5 SIESLVTQIQGLSSSATDISALHNYLKQADDS-LHSDSPTRLLPFLDQLDPSVHSLGYLY 63
Query: 1511 ILKAYTSASTSKEQARGLVSTVARFINSCVAEQIRLVPDKFISVCRRFKDEILLLQTPVR 1332
L+A TS SKEQAR LV +ARF+ SC A+QIRL PDKFISVC+RFKD+++LL+ P+R
Sbjct: 64 FLEACTSGPISKEQARTLVLILARFVTSCAADQIRLAPDKFISVCKRFKDQVMLLEEPMR 123
Query: 1331 GVAPLRTAILKLQSSSGKLTPLHPDFLMLCLLAKCYKAGYSILEEDIFETDQPRDLFLYC 1152
GVAPL A+ KLQSSS LT LHP+FL LCLL+KCYK G SILE+DIFE DQPRDLFLY
Sbjct: 124 GVAPLLAAVRKLQSSSVHLTTLHPEFLQLCLLSKCYKTGLSILEDDIFEVDQPRDLFLYS 183
Query: 1151 YYGGMICIGQKCYREAIELLLNVVTAPQSAMNAISIEAHKKYVLVSLVHTGQFSKKLQKH 972
YYGGM+CIGQK +R+A+ELL NVVTAP S++NAI++EA+KKY+L SL+H GQFS L K+
Sbjct: 184 YYGGMVCIGQKRFRKALELLHNVVTAPMSSINAIAVEAYKKYILASLIHQGQFSTSLPKY 243
Query: 971 GSLAPSKSVQTLCRNYFELGEIYSTGKISELESYVENNREKFESDNNLGLVKQVVSSLYK 792
S A ++++ C+ Y EL YSTGKI+ELE+YV+ NREKFESDNNLGLVKQVVSS+YK
Sbjct: 244 ASSAAQRNLKNFCQPYIELANSYSTGKIAELETYVQTNREKFESDNNLGLVKQVVSSMYK 303
Query: 791 QNIQRLTRAYLTLSLEEIAIRVHLNTPKEAEMHVLQMIQDGVIFATINQKDGMVSFHEDP 612
+NIQRLT+ YLTLSL++IA V LN+PKEAEMHVLQMIQDG I+ATINQKDGMV F EDP
Sbjct: 304 RNIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDGEIYATINQKDGMVRFLEDP 363
Query: 611 EQYKTCEMIEHIDSSIQRVVALSKKLNAVDEIMSCDPAYLAKTGXXXXXXXXXXXYEPSH 432
EQYKTCEMIEHIDSSIQR++ LSKKL A+DE+MSCDP YLAK G
Sbjct: 364 EQYKTCEMIEHIDSSIQRIMNLSKKLTAMDELMSCDPLYLAKAGRER------------- 410
Query: 431 KFDSFQRYDFDDLD 390
QR+DFDD D
Sbjct: 411 -----QRFDFDDFD 419
>ref|XP_002263731.1| PREDICTED: COP9 signalosome complex subunit 3 [Vitis vinifera]
gi|296090247|emb|CBI40066.3| unnamed protein product
[Vitis vinifera]
Length = 424
Score = 540 bits (1390), Expect = e-151
Identities = 273/436 (62%), Positives = 334/436 (76%)
Frame = -3
Query: 1697 MESLEALVVQIQGLSDSDEDIAHLHKRLVVAEEKGLLNGSASRLASVLDQLDPSQHSLGY 1518
M+S+EA+V QIQGLS DI+ LH L A++ LL+ ++RLA L+QLDPS H+LGY
Sbjct: 1 MDSVEAVVTQIQGLSGGSGDISLLHSLLKQADD--LLHNESTRLAPFLEQLDPSIHTLGY 58
Query: 1517 LYILKAYTSASTSKEQARGLVSTVARFINSCVAEQIRLVPDKFISVCRRFKDEILLLQTP 1338
LY+L+A TS KEQA LV ++A FIN+C AEQI L PDKF+S+C+R KD+++LL+ P
Sbjct: 59 LYLLEACTSTPIPKEQANQLVLSIANFINNCSAEQIHLAPDKFVSLCKRLKDQVILLEAP 118
Query: 1337 VRGVAPLRTAILKLQSSSGKLTPLHPDFLMLCLLAKCYKAGYSILEEDIFETDQPRDLFL 1158
+RGVAP+ TA+ KLQS+S LT LHPDFL+LCLLAKCYK G ILE+DIFE DQPRD FL
Sbjct: 119 MRGVAPMLTAVRKLQSASELLTVLHPDFLLLCLLAKCYKTGLCILEDDIFEVDQPRDFFL 178
Query: 1157 YCYYGGMICIGQKCYREAIELLLNVVTAPQSAMNAISIEAHKKYVLVSLVHTGQFSKKLQ 978
YCYYGGMICIGQK +R+A+ELL NVVTAP S +NAI++EA+KKY+LVSL+H GQFS
Sbjct: 179 YCYYGGMICIGQKRFRKALELLHNVVTAPMSTINAIAVEAYKKYILVSLIHNGQFSTTFP 238
Query: 977 KHGSLAPSKSVQTLCRNYFELGEIYSTGKISELESYVENNREKFESDNNLGLVKQVVSSL 798
K+ S ++++ + Y +L YS+GKISE E ++ NREKFE+D NLGLVKQVVSS+
Sbjct: 239 KYTSSVAQRNLKNFSQPYLDLANSYSSGKISEPEKCIQTNREKFEADKNLGLVKQVVSSM 298
Query: 797 YKQNIQRLTRAYLTLSLEEIAIRVHLNTPKEAEMHVLQMIQDGVIFATINQKDGMVSFHE 618
YK+NIQRLT+ YLTLSL++IA V LN+PKEAEMHVLQMIQDG IFATINQKDGMV F E
Sbjct: 299 YKRNIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFQE 358
Query: 617 DPEQYKTCEMIEHIDSSIQRVVALSKKLNAVDEIMSCDPAYLAKTGXXXXXXXXXXXYEP 438
DPEQYKTCEMIEHIDSSIQR++ LSKKL +DE++SCDP YLAK G
Sbjct: 359 DPEQYKTCEMIEHIDSSIQRIMTLSKKLTTMDELISCDPLYLAKAGRER----------- 407
Query: 437 SHKFDSFQRYDFDDLD 390
QR+DFDD D
Sbjct: 408 -------QRFDFDDYD 416
>ref|XP_003524625.1| PREDICTED: COP9 signalosome complex subunit 3-like isoform 2 [Glycine
max]
Length = 423
Score = 538 bits (1385), Expect = e-150
Identities = 274/442 (61%), Positives = 334/442 (75%)
Frame = -3
Query: 1697 MESLEALVVQIQGLSDSDEDIAHLHKRLVVAEEKGLLNGSASRLASVLDQLDPSQHSLGY 1518
M+ LEALV QIQGLS S D+ LH L A++ L ++RLA +L QLDPS HSLG+
Sbjct: 1 MDPLEALVAQIQGLSSSPGDLTRLHTVLKQADDS--LRSESTRLAPILTQLDPSIHSLGF 58
Query: 1517 LYILKAYTSASTSKEQARGLVSTVARFINSCVAEQIRLVPDKFISVCRRFKDEILLLQTP 1338
LYIL+A + +K QA +V V RFI +C EQIRL PDKF+SVCRR KD+++LL+ P
Sbjct: 59 LYILEASMTGPVTKTQAEVVVPIVTRFIGACSTEQIRLAPDKFLSVCRRLKDQVMLLEAP 118
Query: 1337 VRGVAPLRTAILKLQSSSGKLTPLHPDFLMLCLLAKCYKAGYSILEEDIFETDQPRDLFL 1158
+RGVAPL A+ KLQ+S+ LTPLH +FL+LCLLAKCYK G SIL++D+FE DQPRDLFL
Sbjct: 119 IRGVAPLFNALRKLQASAEHLTPLHSEFLLLCLLAKCYKTGLSILDDDVFEVDQPRDLFL 178
Query: 1157 YCYYGGMICIGQKCYREAIELLLNVVTAPQSAMNAISIEAHKKYVLVSLVHTGQFSKKLQ 978
YCYYGGMICIGQK +++A++LL NVVTAP S +NAI++EA+KKY+LVSL+ GQFS L
Sbjct: 179 YCYYGGMICIGQKRFQKALDLLHNVVTAPMSTINAIAVEAYKKYILVSLIRHGQFSTSLP 238
Query: 977 KHGSLAPSKSVQTLCRNYFELGEIYSTGKISELESYVENNREKFESDNNLGLVKQVVSSL 798
K+ S ++++ C+ Y EL Y TGKI+ELE+YV+ N EKFESDNNLGLVKQVVSS+
Sbjct: 239 KYSSSTAQRNLKNFCQPYVELANSYGTGKIAELEAYVKANAEKFESDNNLGLVKQVVSSM 298
Query: 797 YKQNIQRLTRAYLTLSLEEIAIRVHLNTPKEAEMHVLQMIQDGVIFATINQKDGMVSFHE 618
YK+NIQRLT+ YLTLSL++IA V LN+PKEAEMHVLQMIQDG I+ATINQKDGMV F E
Sbjct: 299 YKRNIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDGEIYATINQKDGMVRFLE 358
Query: 617 DPEQYKTCEMIEHIDSSIQRVVALSKKLNAVDEIMSCDPAYLAKTGXXXXXXXXXXXYEP 438
DPEQYKTCEMIEHIDSSIQR++ALS+KL A DE +SCD YL+K G
Sbjct: 359 DPEQYKTCEMIEHIDSSIQRIMALSRKLTATDEQISCDQLYLSKAGRER----------- 407
Query: 437 SHKFDSFQRYDFDDLDEAHKFD 372
QRYDFDD D KF+
Sbjct: 408 -------QRYDFDDFDVPQKFN 422
>ref|XP_003524624.1| PREDICTED: COP9 signalosome complex subunit 3-like isoform 1 [Glycine
max]
Length = 423
Score = 536 bits (1382), Expect = e-150
Identities = 273/442 (61%), Positives = 334/442 (75%)
Frame = -3
Query: 1697 MESLEALVVQIQGLSDSDEDIAHLHKRLVVAEEKGLLNGSASRLASVLDQLDPSQHSLGY 1518
M+ LEALV QIQGLS S D+ LH L A++ L ++RLA +L QLDPS HSLG+
Sbjct: 1 MDPLEALVAQIQGLSSSPGDLTRLHTVLKQADDS--LRSESTRLAPILTQLDPSIHSLGF 58
Query: 1517 LYILKAYTSASTSKEQARGLVSTVARFINSCVAEQIRLVPDKFISVCRRFKDEILLLQTP 1338
LYIL+A + +K QA +V V RFI +C EQIRL PDKF+SVC+R KD+++LL+ P
Sbjct: 59 LYILEASMTGPVTKTQAEVVVPIVTRFIGACSTEQIRLAPDKFLSVCKRLKDQVMLLEAP 118
Query: 1337 VRGVAPLRTAILKLQSSSGKLTPLHPDFLMLCLLAKCYKAGYSILEEDIFETDQPRDLFL 1158
+RGVAPL A+ KLQ+S+ LTPLH +FL+LCLLAKCYK G SIL++D+FE DQPRDLFL
Sbjct: 119 IRGVAPLFNALRKLQASAEHLTPLHSEFLLLCLLAKCYKTGLSILDDDVFEVDQPRDLFL 178
Query: 1157 YCYYGGMICIGQKCYREAIELLLNVVTAPQSAMNAISIEAHKKYVLVSLVHTGQFSKKLQ 978
YCYYGGMICIGQK +++A++LL NVVTAP S +NAI++EA+KKY+LVSL+ GQFS L
Sbjct: 179 YCYYGGMICIGQKRFQKALDLLHNVVTAPMSTINAIAVEAYKKYILVSLIRHGQFSTSLP 238
Query: 977 KHGSLAPSKSVQTLCRNYFELGEIYSTGKISELESYVENNREKFESDNNLGLVKQVVSSL 798
K+ S ++++ C+ Y EL Y TGKI+ELE+YV+ N EKFESDNNLGLVKQVVSS+
Sbjct: 239 KYSSSTAQRNLKNFCQPYVELANSYGTGKIAELEAYVKANAEKFESDNNLGLVKQVVSSM 298
Query: 797 YKQNIQRLTRAYLTLSLEEIAIRVHLNTPKEAEMHVLQMIQDGVIFATINQKDGMVSFHE 618
YK+NIQRLT+ YLTLSL++IA V LN+PKEAEMHVLQMIQDG I+ATINQKDGMV F E
Sbjct: 299 YKRNIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDGEIYATINQKDGMVRFLE 358
Query: 617 DPEQYKTCEMIEHIDSSIQRVVALSKKLNAVDEIMSCDPAYLAKTGXXXXXXXXXXXYEP 438
DPEQYKTCEMIEHIDSSIQR++ALS+KL A DE +SCD YL+K G
Sbjct: 359 DPEQYKTCEMIEHIDSSIQRIMALSRKLTATDEQISCDQLYLSKAGRER----------- 407
Query: 437 SHKFDSFQRYDFDDLDEAHKFD 372
QRYDFDD D KF+
Sbjct: 408 -------QRYDFDDFDVPQKFN 422
>ref|XP_002300091.1| predicted protein [Populus trichocarpa] gi|222847349|gb|EEE84896.1|
predicted protein [Populus trichocarpa]
Length = 423
Score = 533 bits (1374), Expect = e-149
Identities = 272/436 (62%), Positives = 338/436 (77%)
Frame = -3
Query: 1697 MESLEALVVQIQGLSDSDEDIAHLHKRLVVAEEKGLLNGSASRLASVLDQLDPSQHSLGY 1518
M ++E+LV QIQGLS S D++ L L A+E L+ ++RL L+QLDP+ HSLGY
Sbjct: 1 MATVESLVAQIQGLSSSAGDLSLLLTHLKQADE--FLHNESTRLLPFLEQLDPTLHSLGY 58
Query: 1517 LYILKAYTSASTSKEQARGLVSTVARFINSCVAEQIRLVPDKFISVCRRFKDEILLLQTP 1338
LYIL+A TS + +QAR LV ++RF+ SCVA+QIRL P+KFI+VC+ FKD++L+L+ P
Sbjct: 59 LYILEACTSWPVTNDQARRLVLILSRFLTSCVADQIRLAPEKFIAVCKSFKDQVLMLEAP 118
Query: 1337 VRGVAPLRTAILKLQSSSGKLTPLHPDFLMLCLLAKCYKAGYSILEEDIFETDQPRDLFL 1158
+RGV PL A+ KL+SS LT LHPDFL LCLLAKCYK G SILE+DIFE DQPRD +L
Sbjct: 119 IRGVVPLLEAVKKLRSSE-HLTTLHPDFLQLCLLAKCYKTGLSILEDDIFEVDQPRDFYL 177
Query: 1157 YCYYGGMICIGQKCYREAIELLLNVVTAPQSAMNAISIEAHKKYVLVSLVHTGQFSKKLQ 978
YCYYGGMICIGQK +++A+ELL NVVTAP S++NAI++EA KKYVLVSL++ GQFS L
Sbjct: 178 YCYYGGMICIGQKRFQKALELLHNVVTAPMSSINAIAVEAFKKYVLVSLIYNGQFSTSLP 237
Query: 977 KHGSLAPSKSVQTLCRNYFELGEIYSTGKISELESYVENNREKFESDNNLGLVKQVVSSL 798
K+ S A ++++T+C+ Y EL YS GKISELE Y++ NREKF+SDNNLGLVKQVV+S+
Sbjct: 238 KYTSSAAQRNLKTICQPYIELANTYSIGKISELEPYIQTNREKFDSDNNLGLVKQVVTSM 297
Query: 797 YKQNIQRLTRAYLTLSLEEIAIRVHLNTPKEAEMHVLQMIQDGVIFATINQKDGMVSFHE 618
YK+NIQRLT+ YLTLSL++IA V L++PKEAEMHVLQMIQDG I+ATINQ+DGMV F E
Sbjct: 298 YKRNIQRLTQTYLTLSLQDIANTVQLSSPKEAEMHVLQMIQDGEIYATINQRDGMVRFLE 357
Query: 617 DPEQYKTCEMIEHIDSSIQRVVALSKKLNAVDEIMSCDPAYLAKTGXXXXXXXXXXXYEP 438
DPEQYKTCEMIEHIDSSIQR++ LSKKL A+DE++SCDP YLAK G
Sbjct: 358 DPEQYKTCEMIEHIDSSIQRIMTLSKKLTAMDELISCDPLYLAKVGRER----------- 406
Query: 437 SHKFDSFQRYDFDDLD 390
QR+DFDD D
Sbjct: 407 -------QRFDFDDFD 415