BLASTX nr result

ID: Cimicifuga21_contig00003650 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003650
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28706.3| unnamed protein product [Vitis vinifera]              105   3e-21
ref|XP_004139687.1| PREDICTED: 40S ribosomal protein S18-like [C...   103   2e-20
gb|ADR71282.1| 40S ribosomal protein S18C [Hevea brasiliensis]        103   2e-20
ref|XP_002520719.1| 40S ribosomal protein S18, putative [Ricinus...   103   2e-20
ref|XP_002524340.1| 40S ribosomal protein S18, putative [Ricinus...   103   2e-20

>emb|CBI28706.3| unnamed protein product [Vitis vinifera]
          Length = 912

 Score =  105 bits (263), Expect = 3e-21
 Identities = 53/60 (88%), Positives = 55/60 (91%)
 Frame = -1

Query: 181 RLLERQTLIMSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVD 2
           R    +TL MSLVANE+FQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVD
Sbjct: 752 RRASSETLTMSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVD 811


>ref|XP_004139687.1| PREDICTED: 40S ribosomal protein S18-like [Cucumis sativus]
           gi|449525091|ref|XP_004169553.1| PREDICTED: 40S
           ribosomal protein S18-like [Cucumis sativus]
          Length = 152

 Score =  103 bits (256), Expect = 2e-20
 Identities = 51/51 (100%), Positives = 51/51 (100%)
 Frame = -1

Query: 154 MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVD 2
           MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVD
Sbjct: 1   MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVD 51


>gb|ADR71282.1| 40S ribosomal protein S18C [Hevea brasiliensis]
          Length = 152

 Score =  103 bits (256), Expect = 2e-20
 Identities = 51/51 (100%), Positives = 51/51 (100%)
 Frame = -1

Query: 154 MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVD 2
           MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVD
Sbjct: 1   MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVD 51


>ref|XP_002520719.1| 40S ribosomal protein S18, putative [Ricinus communis]
           gi|223540104|gb|EEF41681.1| 40S ribosomal protein S18,
           putative [Ricinus communis] gi|313586541|gb|ADR71281.1|
           40S ribosomal protein S18A [Hevea brasiliensis]
          Length = 152

 Score =  103 bits (256), Expect = 2e-20
 Identities = 51/51 (100%), Positives = 51/51 (100%)
 Frame = -1

Query: 154 MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVD 2
           MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVD
Sbjct: 1   MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVD 51


>ref|XP_002524340.1| 40S ribosomal protein S18, putative [Ricinus communis]
           gi|223536431|gb|EEF38080.1| 40S ribosomal protein S18,
           putative [Ricinus communis]
          Length = 152

 Score =  103 bits (256), Expect = 2e-20
 Identities = 51/51 (100%), Positives = 51/51 (100%)
 Frame = -1

Query: 154 MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVD 2
           MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVD
Sbjct: 1   MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVD 51


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