BLASTX nr result

ID: Cimicifuga21_contig00003649 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003649
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28706.3| unnamed protein product [Vitis vinifera]              239   2e-61
emb|CBI18243.3| unnamed protein product [Vitis vinifera]              233   2e-59
ref|XP_002282412.1| PREDICTED: 40S ribosomal protein S18-like [V...   231   6e-59
gb|AEO34813.1| hypothetical protein [Amblyomma maculatum]             229   1e-58
ref|XP_002524340.1| 40S ribosomal protein S18, putative [Ricinus...   227   7e-58

>emb|CBI28706.3| unnamed protein product [Vitis vinifera]
          Length = 912

 Score =  239 bits (610), Expect = 2e-61
 Identities = 121/131 (92%), Positives = 125/131 (95%)
 Frame = -1

Query: 417  ENREQRDRAEETLIMSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCK 238
            E+ + R  + ETL MSLVANE+FQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCK
Sbjct: 747  EDEQLRRASSETLTMSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCK 806

Query: 237  KADVDMNKRAGELSAAELENLMVIVANPRQFKIPDWFLNRKKDYKDGRYSQVVSNALDMK 58
            KADVDMNKRAGELSAAELENLMVIVANPRQFKIPDWFLNRKKDYKDGRYSQVVSNALDMK
Sbjct: 807  KADVDMNKRAGELSAAELENLMVIVANPRQFKIPDWFLNRKKDYKDGRYSQVVSNALDMK 866

Query: 57   LRDDLERLKKI 25
            LRDDLERLKKI
Sbjct: 867  LRDDLERLKKI 877


>emb|CBI18243.3| unnamed protein product [Vitis vinifera]
          Length = 194

 Score =  233 bits (593), Expect = 2e-59
 Identities = 119/131 (90%), Positives = 122/131 (93%)
 Frame = -1

Query: 417 ENREQRDRAEETLIMSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCK 238
           E RE +  +     MSLVANE+FQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCK
Sbjct: 29  ERRESKVTSIFASTMSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCK 88

Query: 237 KADVDMNKRAGELSAAELENLMVIVANPRQFKIPDWFLNRKKDYKDGRYSQVVSNALDMK 58
           KADVDMNKRAGELSAAELENLMVIVANPRQFKIPDWFLNRKKDYKDGRYSQVVSNALDMK
Sbjct: 89  KADVDMNKRAGELSAAELENLMVIVANPRQFKIPDWFLNRKKDYKDGRYSQVVSNALDMK 148

Query: 57  LRDDLERLKKI 25
           LRDDLERLKKI
Sbjct: 149 LRDDLERLKKI 159


>ref|XP_002282412.1| PREDICTED: 40S ribosomal protein S18-like [Vitis vinifera]
           gi|225460586|ref|XP_002262702.1| PREDICTED: 40S
           ribosomal protein S18-like [Vitis vinifera]
           gi|359479621|ref|XP_003632303.1| PREDICTED: 40S
           ribosomal protein S18-like [Vitis vinifera]
          Length = 152

 Score =  231 bits (588), Expect = 6e-59
 Identities = 116/117 (99%), Positives = 117/117 (100%)
 Frame = -1

Query: 375 MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELS 196
           MSLVANE+FQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELS
Sbjct: 1   MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELS 60

Query: 195 AAELENLMVIVANPRQFKIPDWFLNRKKDYKDGRYSQVVSNALDMKLRDDLERLKKI 25
           AAELENLMVIVANPRQFKIPDWFLNRKKDYKDGRYSQVVSNALDMKLRDDLERLKKI
Sbjct: 61  AAELENLMVIVANPRQFKIPDWFLNRKKDYKDGRYSQVVSNALDMKLRDDLERLKKI 117


>gb|AEO34813.1| hypothetical protein [Amblyomma maculatum]
          Length = 152

 Score =  229 bits (585), Expect = 1e-58
 Identities = 115/117 (98%), Positives = 116/117 (99%)
 Frame = -1

Query: 375 MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELS 196
           M+LVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELS
Sbjct: 1   MALVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELS 60

Query: 195 AAELENLMVIVANPRQFKIPDWFLNRKKDYKDGRYSQVVSNALDMKLRDDLERLKKI 25
           AAELENLM IVANPRQFKIPDWFLNRKKDYKDGRYSQVVSNALDMKLRDDLERLKKI
Sbjct: 61  AAELENLMTIVANPRQFKIPDWFLNRKKDYKDGRYSQVVSNALDMKLRDDLERLKKI 117


>ref|XP_002524340.1| 40S ribosomal protein S18, putative [Ricinus communis]
           gi|223536431|gb|EEF38080.1| 40S ribosomal protein S18,
           putative [Ricinus communis]
          Length = 152

 Score =  227 bits (579), Expect = 7e-58
 Identities = 113/117 (96%), Positives = 117/117 (100%)
 Frame = -1

Query: 375 MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELS 196
           MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGEL+
Sbjct: 1   MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60

Query: 195 AAELENLMVIVANPRQFKIPDWFLNRKKDYKDGRYSQVVSNALDMKLRDDLERLKKI 25
           AAEL+NLMVIVANPRQFKIPDWFLNR+KDYKDG+YSQVVSNALDMKLRDDLERLKKI
Sbjct: 61  AAELDNLMVIVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKI 117


Top