BLASTX nr result

ID: Cimicifuga21_contig00003648 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003648
         (965 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632945.1| PREDICTED: uncharacterized protein LOC100855...   215   1e-53
ref|XP_002274403.1| PREDICTED: uncharacterized protein LOC100246...   213   4e-53
ref|XP_002316526.1| predicted protein [Populus trichocarpa] gi|2...   202   7e-50
ref|XP_002518486.1| conserved hypothetical protein [Ricinus comm...   194   2e-47
ref|XP_004155601.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   191   2e-46

>ref|XP_003632945.1| PREDICTED: uncharacterized protein LOC100855186 [Vitis vinifera]
          Length = 213

 Score =  215 bits (547), Expect = 1e-53
 Identities = 127/228 (55%), Positives = 148/228 (64%), Gaps = 20/228 (8%)
 Frame = +1

Query: 91  MAKGRKVLVSSRSERLLGY----NQSVSNTDVSELGEEDVWSMIDDAVDRDNHLQDTG-- 252
           MAKGRK L +SRSERLLG     +   +  D SELGEEDVWSM+DD V+RD+H+   G  
Sbjct: 1   MAKGRK-LTTSRSERLLGSFAYGHGQGAGADSSELGEEDVWSMVDDMVERDDHVNGGGGG 59

Query: 253 --RTEWTSNGSGS-------HRDRLTRSQRWANQEDPXXXXXXIGGLSLAFDDVGRSASS 405
             +++W+    G        HR R+ R  R             +GGLSLAFDD G++ASS
Sbjct: 60  GGQSDWSPRAGGEPAIRNHHHRRRIPRDDR-----------HQVGGLSLAFDDSGKTASS 108

Query: 406 RILHQYHAHDNRVPQ-RGRHVASSAPVNVPNWSKMYRVDSVESIHXXXXXXXXXXSERVP 582
           RI+HQY   D   P  RG H+A+SAPVNVP+W K+ RVDSVES+H           E VP
Sbjct: 109 RIVHQYRPQDGVTPSPRGHHMATSAPVNVPDWHKILRVDSVESLHDSDDDREL---EMVP 165

Query: 583 PHEYLAR----SRKSAATSVFEGVGRTLKGRDMSRVRDAVWSQTGFDG 714
           PHEYLAR    SRK AATSV EGVGRTLKGRDMSRVRDAVWSQTGFDG
Sbjct: 166 PHEYLAREYAASRKMAATSVLEGVGRTLKGRDMSRVRDAVWSQTGFDG 213


>ref|XP_002274403.1| PREDICTED: uncharacterized protein LOC100246942 [Vitis vinifera]
          Length = 213

 Score =  213 bits (543), Expect = 4e-53
 Identities = 126/228 (55%), Positives = 147/228 (64%), Gaps = 20/228 (8%)
 Frame = +1

Query: 91  MAKGRKVLVSSRSERLLGY----NQSVSNTDVSELGEEDVWSMIDDAVDRDNHLQDTG-- 252
           MAKGRK L +SRSERLLG     +   +  D SELGEEDVWSM+DD V+RD+H+   G  
Sbjct: 1   MAKGRK-LTTSRSERLLGSFAYGHGQGAGADSSELGEEDVWSMVDDMVERDDHVNGGGGG 59

Query: 253 --RTEWTSNGSGS-------HRDRLTRSQRWANQEDPXXXXXXIGGLSLAFDDVGRSASS 405
             +++W+    G        HR R+ R  R             +GGLSLAFDD G++ SS
Sbjct: 60  GGQSDWSPRAGGEPAMRNHHHRRRIPRDDR-----------HQVGGLSLAFDDSGKTTSS 108

Query: 406 RILHQYHAHDNRVPQ-RGRHVASSAPVNVPNWSKMYRVDSVESIHXXXXXXXXXXSERVP 582
           RI+HQY   D   P  RG H+A+SAPVNVP+W K+ RVDSVES+H           E VP
Sbjct: 109 RIVHQYRPQDGVTPSPRGHHMATSAPVNVPDWHKILRVDSVESLHDSDDDREL---EMVP 165

Query: 583 PHEYLAR----SRKSAATSVFEGVGRTLKGRDMSRVRDAVWSQTGFDG 714
           PHEYLAR    SRK AATSV EGVGRTLKGRDMSRVRDAVWSQTGFDG
Sbjct: 166 PHEYLAREYAASRKMAATSVLEGVGRTLKGRDMSRVRDAVWSQTGFDG 213


>ref|XP_002316526.1| predicted protein [Populus trichocarpa] gi|222859591|gb|EEE97138.1|
           predicted protein [Populus trichocarpa]
          Length = 209

 Score =  202 bits (515), Expect = 7e-50
 Identities = 117/222 (52%), Positives = 137/222 (61%), Gaps = 14/222 (6%)
 Frame = +1

Query: 91  MAKGRKVLVSSRSERLLGYNQSVSN------TDVSELGEEDVWSMIDDAVDRDNHLQDTG 252
           MAKGR+ L +SRSERLLG N S  N       +VSELGEEDVWSM+DD  DR +      
Sbjct: 1   MAKGRR-LTTSRSERLLGSNYSYGNGQVPMVNEVSELGEEDVWSMVDDTADRSDSAVSNS 59

Query: 253 RTEWTSNGSGSHRDRLTRSQRWANQEDPXXXXXXIGGLSLAFDDVG----RSASSRILHQ 420
              W        R R+ R  R             +GGLSLAF+D      ++ASSRI+HQ
Sbjct: 60  NGAWNPRAELESRRRIPRDDR------------NMGGLSLAFEDSSSGGNKTASSRIVHQ 107

Query: 421 YHAHDNRVPQRGRHVASSAPVNVPNWSKMYRVDSVESIHXXXXXXXXXXSERVPPHEYL- 597
           +  +D       RH+A+SAPVNVP+WSK+YRV+SVES+H          SE VPPHEYL 
Sbjct: 108 FRGNDLVASASPRHMATSAPVNVPDWSKIYRVNSVESLHDSDDGFDDQESEMVPPHEYLA 167

Query: 598 ---ARSRKSAATSVFEGVGRTLKGRDMSRVRDAVWSQTGFDG 714
              ARSRK+   SV EGVGRTLKGRDM RVRDAVWSQTGFDG
Sbjct: 168 REYARSRKTGGASVVEGVGRTLKGRDMRRVRDAVWSQTGFDG 209


>ref|XP_002518486.1| conserved hypothetical protein [Ricinus communis]
           gi|223542331|gb|EEF43873.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 221

 Score =  194 bits (494), Expect = 2e-47
 Identities = 118/230 (51%), Positives = 142/230 (61%), Gaps = 22/230 (9%)
 Frame = +1

Query: 91  MAKGRKVLVSSRSERLLG-------YNQSVSNTDVSELGEEDVWSMIDDAVD----RDNH 237
           MAKGR+ L +SRSERLLG       +   +  TD SELGEEDVWSM+DD  D     DN 
Sbjct: 1   MAKGRR-LTASRSERLLGSYTYSNGHGHDMLGTDSSELGEEDVWSMVDDGDDDGDRNDNQ 59

Query: 238 LQDTGRTEWTSNGSGSHRDRLTRSQRWANQEDPXXXXXXIGGLSLAFDDV--GRSASSRI 411
           L +  + +W+            RS+R      P      +GGLSLAF+D   G++ASSRI
Sbjct: 60  LMNNSQGDWSPRADFESM----RSRR----RIPRGDDRHVGGLSLAFEDSSSGKTASSRI 111

Query: 412 LHQYHAHDNRVPQ-----RGRHVASSAPVNVPNWSKMYRVDSVESIHXXXXXXXXXXSER 576
           +HQ+  H + V         RH+A+SAPVNVP+WSK+ RVDSVES+H          SE 
Sbjct: 112 VHQFRGHHDSVAAPPAAASPRHMATSAPVNVPDWSKILRVDSVESLHDLDDGFDEGDSEM 171

Query: 577 VPPHEYL----ARSRKSAATSVFEGVGRTLKGRDMSRVRDAVWSQTGFDG 714
           VPPHEYL    ARSRK    SVFEGVGRTLKGRD+ RVRDAVW+QTGFDG
Sbjct: 172 VPPHEYLARVYARSRKMGNASVFEGVGRTLKGRDLRRVRDAVWNQTGFDG 221


>ref|XP_004155601.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101218032
           [Cucumis sativus]
          Length = 211

 Score =  191 bits (486), Expect = 2e-46
 Identities = 109/214 (50%), Positives = 135/214 (63%), Gaps = 6/214 (2%)
 Frame = +1

Query: 91  MAKGRKVLVSSRSERLLG-----YNQSVSNTDVSELGEEDVWSMIDDA-VDRDNHLQDTG 252
           MAKGRK L +SRSER LG     +NQ  + +D SELGEEDVW M+D    +R+   ++  
Sbjct: 1   MAKGRK-LTTSRSERFLGSYTYNHNQGSTGSDSSELGEEDVWPMVDSVETEREEFSEENS 59

Query: 253 RTEWTSNGSGSHRDRLTRSQRWANQEDPXXXXXXIGGLSLAFDDVGRSASSRILHQYHAH 432
              +  +G G +        R  +          +GGLSLAF+D  R  S+RI+HQ+  +
Sbjct: 60  LAGY--DGGGINISHGGIPVRRGSGVPGDTRERHVGGLSLAFEDPSRKTSARIVHQFRGN 117

Query: 433 DNRVPQRGRHVASSAPVNVPNWSKMYRVDSVESIHXXXXXXXXXXSERVPPHEYLARSRK 612
           D     RGR +A+SAPVNVP+WSK+ RVDSV+S+           SE VPPHEYLARSRK
Sbjct: 118 DTVASPRGRQMATSAPVNVPDWSKILRVDSVDSLQEFDEPLDDPESEIVPPHEYLARSRK 177

Query: 613 SAATSVFEGVGRTLKGRDMSRVRDAVWSQTGFDG 714
             ATSVF GVGRTLKGRD+ RVRDAVW QTGFDG
Sbjct: 178 RXATSVFVGVGRTLKGRDLRRVRDAVWMQTGFDG 211


Top