BLASTX nr result

ID: Cimicifuga21_contig00003639 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003639
         (1270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29919.3| unnamed protein product [Vitis vinifera]              299   9e-79
ref|XP_002282457.1| PREDICTED: thioredoxin-like 1-1, chloroplast...   299   9e-79
emb|CAN64807.1| hypothetical protein VITISV_007145 [Vitis vinifera]   299   9e-79
ref|XP_002325404.1| predicted protein [Populus trichocarpa] gi|2...   297   3e-78
ref|XP_003554002.1| PREDICTED: thioredoxin-like 1-1, chloroplast...   296   1e-77

>emb|CBI29919.3| unnamed protein product [Vitis vinifera]
          Length = 309

 Score =  299 bits (766), Expect = 9e-79
 Identities = 151/242 (62%), Positives = 173/242 (71%), Gaps = 22/242 (9%)
 Frame = -3

Query: 1064 SSFNSDFHGYKIVLPQVQS---KGCLQSSPIQMSLVIGKAYRWWEKGVQQNMKEIASAQD 894
            SS NSDFHG +IVL ++ S   +   Q+S   M L IGKA +WWEKG+Q NMKE+  AQD
Sbjct: 61   SSSNSDFHGGRIVLQEIGSMPKRRNAQASCTLMGLAIGKAQKWWEKGLQPNMKEVTGAQD 120

Query: 893  LVDSLGNSGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPDVQFLQVNHEEHKSLCYSLN 714
            LVDSL N+GDKLV+VDFFSPGCGGC+ALHPKICQ AEMNPDV+FLQVN+EEHKS+CYSLN
Sbjct: 121  LVDSLLNAGDKLVVVDFFSPGCGGCRALHPKICQLAEMNPDVEFLQVNYEEHKSMCYSLN 180

Query: 713  VHVLPFFRFYRGAHGRLCSFSCTNATIKKFRDALAKHTTERCSLGPTRGXXXXXXXXXAG 534
            VHVLPFFRFYRGAHGRLCSFSCTNATIKKF+DALAKHT +RCSL PT+G         + 
Sbjct: 181  VHVLPFFRFYRGAHGRLCSFSCTNATIKKFKDALAKHTPDRCSLEPTKGLEEKELLALSA 240

Query: 533  NKQLSFNYTPKPTQVPLLE-------------------PAPANIRHPLPSTSSKPNKESD 411
            NK  SFNY+PKP   P  E                   P P  +  PLPSTS K   +S+
Sbjct: 241  NKDFSFNYSPKPVPTPAQEEIAVEATSAAAFSNEELPLPLPLPLSLPLPSTSLKGFHDSE 300

Query: 410  KK 405
             K
Sbjct: 301  VK 302


>ref|XP_002282457.1| PREDICTED: thioredoxin-like 1-1, chloroplastic-like [Vitis vinifera]
          Length = 311

 Score =  299 bits (766), Expect = 9e-79
 Identities = 151/242 (62%), Positives = 173/242 (71%), Gaps = 22/242 (9%)
 Frame = -3

Query: 1064 SSFNSDFHGYKIVLPQVQS---KGCLQSSPIQMSLVIGKAYRWWEKGVQQNMKEIASAQD 894
            SS NSDFHG +IVL ++ S   +   Q+S   M L IGKA +WWEKG+Q NMKE+  AQD
Sbjct: 63   SSSNSDFHGGRIVLQEIGSMPKRRNAQASCTLMGLAIGKAQKWWEKGLQPNMKEVTGAQD 122

Query: 893  LVDSLGNSGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPDVQFLQVNHEEHKSLCYSLN 714
            LVDSL N+GDKLV+VDFFSPGCGGC+ALHPKICQ AEMNPDV+FLQVN+EEHKS+CYSLN
Sbjct: 123  LVDSLLNAGDKLVVVDFFSPGCGGCRALHPKICQLAEMNPDVEFLQVNYEEHKSMCYSLN 182

Query: 713  VHVLPFFRFYRGAHGRLCSFSCTNATIKKFRDALAKHTTERCSLGPTRGXXXXXXXXXAG 534
            VHVLPFFRFYRGAHGRLCSFSCTNATIKKF+DALAKHT +RCSL PT+G         + 
Sbjct: 183  VHVLPFFRFYRGAHGRLCSFSCTNATIKKFKDALAKHTPDRCSLEPTKGLEEKELLALSA 242

Query: 533  NKQLSFNYTPKPTQVPLLE-------------------PAPANIRHPLPSTSSKPNKESD 411
            NK  SFNY+PKP   P  E                   P P  +  PLPSTS K   +S+
Sbjct: 243  NKDFSFNYSPKPVPTPAQEEIAVEATSAAAFSNEELPLPLPLPLSLPLPSTSLKGFHDSE 302

Query: 410  KK 405
             K
Sbjct: 303  VK 304


>emb|CAN64807.1| hypothetical protein VITISV_007145 [Vitis vinifera]
          Length = 311

 Score =  299 bits (766), Expect = 9e-79
 Identities = 151/242 (62%), Positives = 173/242 (71%), Gaps = 22/242 (9%)
 Frame = -3

Query: 1064 SSFNSDFHGYKIVLPQVQS---KGCLQSSPIQMSLVIGKAYRWWEKGVQQNMKEIASAQD 894
            SS NSDFHG +IVL ++ S   +   Q+S   M L IGKA +WWEKG+Q NMKE+  AQD
Sbjct: 63   SSSNSDFHGGRIVLQEIGSMPKRRNAQASCTLMGLAIGKAQKWWEKGLQPNMKEVTGAQD 122

Query: 893  LVDSLGNSGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPDVQFLQVNHEEHKSLCYSLN 714
            LVDSL N+GDKLV+VDFFSPGCGGC+ALHPKICQ AEMNPDV+FLQVN+EEHKS+CYSLN
Sbjct: 123  LVDSLLNAGDKLVVVDFFSPGCGGCRALHPKICQLAEMNPDVEFLQVNYEEHKSMCYSLN 182

Query: 713  VHVLPFFRFYRGAHGRLCSFSCTNATIKKFRDALAKHTTERCSLGPTRGXXXXXXXXXAG 534
            VHVLPFFRFYRGAHGRLCSFSCTNATIKKF+DALAKHT +RCSL PT+G         + 
Sbjct: 183  VHVLPFFRFYRGAHGRLCSFSCTNATIKKFKDALAKHTPDRCSLEPTKGLEEKELLALSA 242

Query: 533  NKQLSFNYTPKPTQVPLLE-------------------PAPANIRHPLPSTSSKPNKESD 411
            NK  SFNY+PKP   P  E                   P P  +  PLPSTS K   +S+
Sbjct: 243  NKDFSFNYSPKPVPTPAQEEIAVEATSAAAXSNXELPLPLPLPLSLPLPSTSLKGFHDSE 302

Query: 410  KK 405
             K
Sbjct: 303  VK 304


>ref|XP_002325404.1| predicted protein [Populus trichocarpa] gi|222862279|gb|EEE99785.1|
            predicted protein [Populus trichocarpa]
          Length = 295

 Score =  297 bits (761), Expect = 3e-78
 Identities = 159/248 (64%), Positives = 187/248 (75%), Gaps = 17/248 (6%)
 Frame = -3

Query: 1082 RPQTLKSSFNSDFHGYKIVLPQVQSK---GCL-QSSPIQMS-LVIGKAYRWWEKGVQQNM 918
            R Q  +SS  SDF+G ++V+   QSK   G L Q+S + ++ L +  A +WWEKG+Q NM
Sbjct: 46   RSQISRSSSCSDFYGKRVVVHGNQSKPRRGYLPQASVVALTGLKLKYAKKWWEKGLQPNM 105

Query: 917  KEIASAQDLVDSLGNSGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPDVQFLQVNHEEH 738
            +E+ SAQDLVDSL N+GD+LV+VDFFSPGCGGCKALHPKICQ AEMNPDVQFLQVN+EEH
Sbjct: 106  REVTSAQDLVDSLMNAGDQLVVVDFFSPGCGGCKALHPKICQLAEMNPDVQFLQVNYEEH 165

Query: 737  KSLCYSLNVHVLPFFRFYRGAHGRLCSFSCTNATIKKFRDALAKHTTERCSLGPTRGXXX 558
            KS+CYSLNVHVLPFFRFYRGAHGRLCSFSCTNATIKKF+DALAKHT ERCSLGPT+G   
Sbjct: 166  KSMCYSLNVHVLPFFRFYRGAHGRLCSFSCTNATIKKFKDALAKHTPERCSLGPTKGLEE 225

Query: 557  XXXXXXAGNKQLSFNYTPKPTQ---VPLLEP-APA--------NIRHPLPSTSSKPNKES 414
                  A NK LSF YTPKP Q   VP  E  AP          +  PLP TSSK  ++S
Sbjct: 226  KELVALAANKDLSFTYTPKPVQPAPVPAEEEVAPTAGPSHSDRGLPLPLPITSSKSAQDS 285

Query: 413  DKKTLVTT 390
            ++KTLV++
Sbjct: 286  EEKTLVSS 293


>ref|XP_003554002.1| PREDICTED: thioredoxin-like 1-1, chloroplastic-like [Glycine max]
          Length = 297

 Score =  296 bits (757), Expect = 1e-77
 Identities = 154/246 (62%), Positives = 177/246 (71%), Gaps = 13/246 (5%)
 Frame = -3

Query: 1082 RPQTLKS-SFNSDFHGYKIV------LPQVQSKGCLQSSPIQMSLVIGKAYRWWEKGVQQ 924
            + Q L+S S +S+F G K+V      LP   +     S+  QMS  +GK  +WWEKG+Q 
Sbjct: 51   KSQVLRSWSSSSEFQGIKLVFHVNRGLPNRVNSRLRASTGAQMSFRLGKVQKWWEKGLQP 110

Query: 923  NMKEIASAQDLVDSLGNSGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPDVQFLQVNHE 744
            NMKE+ SAQD VDSL ++GDKLV+VDFFSPGCGGCKALHPKICQFAEMNPDVQFLQVN+E
Sbjct: 111  NMKEVTSAQDFVDSLLSAGDKLVVVDFFSPGCGGCKALHPKICQFAEMNPDVQFLQVNYE 170

Query: 743  EHKSLCYSLNVHVLPFFRFYRGAHGRLCSFSCTNATIKKFRDALAKHTTERCSLGPTRGX 564
            EHKS+CYSLNVHVLPFFRFYRGAHGRLCSFSCTNATIKKF+DALAKHT +RCSLGPT+G 
Sbjct: 171  EHKSMCYSLNVHVLPFFRFYRGAHGRLCSFSCTNATIKKFKDALAKHTPDRCSLGPTKGL 230

Query: 563  XXXXXXXXAGNKQLSFNYTPKPTQVPL------LEPAPANIRHPLPSTSSKPNKESDKKT 402
                    A NK LSF  +P+P Q          EPAPA     LPS S   N E  KK 
Sbjct: 231  EEKELLALAANKDLSFTNSPEPLQPAHADEELGTEPAPAPGSKSLPSPSMILNSEVSKKR 290

Query: 401  LVTTTG 384
             +TT+G
Sbjct: 291  TLTTSG 296


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