BLASTX nr result

ID: Cimicifuga21_contig00003638 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003638
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA54870.1| putative chorismate synthase [Fagus sylvatica]         102   2e-20
gb|ACJ14000.1| embryo defective 1144 [Helianthus annuus]              102   3e-20
gb|ACJ13999.1| embryo defective 1144 [Helianthus annuus] gi|2119...   102   3e-20
gb|ACJ14021.1| embryo defective 1144 [Helianthus petiolaris]          100   2e-19
ref|XP_002529571.1| Chorismate synthase, chloroplast precursor, ...    99   3e-19

>gb|ABA54870.1| putative chorismate synthase [Fagus sylvatica]
          Length = 434

 Score =  102 bits (255), Expect = 2e-20
 Identities = 45/66 (68%), Positives = 56/66 (84%)
 Frame = -1

Query: 246 RQEVELMTRGRHDPCVVPRAVPMVEAMVALVLVDQLIGHHGQCQLFPINPAFQDPINLPK 67
           ++E+EL+ RGRHDPCVVPRAVPMVEAMVALVL DQL+  + QC LFPINP  Q+P +LP+
Sbjct: 367 KKEIELIARGRHDPCVVPRAVPMVEAMVALVLADQLMSQYAQCNLFPINPDLQEPFSLPR 426

Query: 66  LEPANL 49
            EPA++
Sbjct: 427 FEPAHV 432


>gb|ACJ14000.1| embryo defective 1144 [Helianthus annuus]
          Length = 109

 Score =  102 bits (254), Expect = 3e-20
 Identities = 46/62 (74%), Positives = 54/62 (87%)
 Frame = -1

Query: 246 RQEVELMTRGRHDPCVVPRAVPMVEAMVALVLVDQLIGHHGQCQLFPINPAFQDPINLPK 67
           ++E EL+ RGRHDPCVVPRAVPMVEA VALVL+DQL+  + QCQLFPINP FQ+P+ LPK
Sbjct: 45  KKETELIARGRHDPCVVPRAVPMVEASVALVLMDQLLAQYAQCQLFPINPDFQEPLQLPK 104

Query: 66  LE 61
           LE
Sbjct: 105 LE 106


>gb|ACJ13999.1| embryo defective 1144 [Helianthus annuus]
           gi|211953679|gb|ACJ14001.1| embryo defective 1144
           [Helianthus annuus] gi|211953681|gb|ACJ14002.1| embryo
           defective 1144 [Helianthus annuus]
           gi|211953683|gb|ACJ14003.1| embryo defective 1144
           [Helianthus annuus] gi|211953685|gb|ACJ14004.1| embryo
           defective 1144 [Helianthus annuus]
           gi|211953687|gb|ACJ14005.1| embryo defective 1144
           [Helianthus annuus] gi|211953689|gb|ACJ14006.1| embryo
           defective 1144 [Helianthus annuus]
           gi|211953691|gb|ACJ14007.1| embryo defective 1144
           [Helianthus annuus] gi|211953693|gb|ACJ14008.1| embryo
           defective 1144 [Helianthus annuus]
           gi|211953695|gb|ACJ14009.1| embryo defective 1144
           [Helianthus annuus] gi|211953697|gb|ACJ14010.1| embryo
           defective 1144 [Helianthus annuus]
           gi|211953699|gb|ACJ14011.1| embryo defective 1144
           [Helianthus annuus] gi|211953701|gb|ACJ14012.1| embryo
           defective 1144 [Helianthus annuus]
           gi|211953703|gb|ACJ14013.1| embryo defective 1144
           [Helianthus annuus] gi|211953705|gb|ACJ14014.1| embryo
           defective 1144 [Helianthus annuus]
           gi|211953707|gb|ACJ14015.1| embryo defective 1144
           [Helianthus annuus] gi|211953709|gb|ACJ14016.1| embryo
           defective 1144 [Helianthus annuus]
           gi|211953711|gb|ACJ14017.1| embryo defective 1144
           [Helianthus annuus] gi|211953713|gb|ACJ14018.1| embryo
           defective 1144 [Helianthus annuus]
           gi|211953715|gb|ACJ14019.1| embryo defective 1144
           [Helianthus annuus] gi|211953717|gb|ACJ14020.1| embryo
           defective 1144 [Helianthus annuus]
           gi|211953721|gb|ACJ14022.1| embryo defective 1144
           [Helianthus petiolaris]
          Length = 109

 Score =  102 bits (254), Expect = 3e-20
 Identities = 46/62 (74%), Positives = 54/62 (87%)
 Frame = -1

Query: 246 RQEVELMTRGRHDPCVVPRAVPMVEAMVALVLVDQLIGHHGQCQLFPINPAFQDPINLPK 67
           ++E EL+ RGRHDPCVVPRAVPMVEA VALVL+DQL+  + QCQLFPINP FQ+P+ LPK
Sbjct: 45  KKETELIARGRHDPCVVPRAVPMVEASVALVLMDQLLAQYAQCQLFPINPDFQEPLQLPK 104

Query: 66  LE 61
           LE
Sbjct: 105 LE 106


>gb|ACJ14021.1| embryo defective 1144 [Helianthus petiolaris]
          Length = 109

 Score =  100 bits (248), Expect = 2e-19
 Identities = 45/62 (72%), Positives = 53/62 (85%)
 Frame = -1

Query: 246 RQEVELMTRGRHDPCVVPRAVPMVEAMVALVLVDQLIGHHGQCQLFPINPAFQDPINLPK 67
           ++E EL+ RGRHDPCVVPRAVPMVEA VALVL+DQL+  + QCQLFPIN  FQ+P+ LPK
Sbjct: 45  KKETELIARGRHDPCVVPRAVPMVEASVALVLIDQLLAQYAQCQLFPINSDFQEPLQLPK 104

Query: 66  LE 61
           LE
Sbjct: 105 LE 106


>ref|XP_002529571.1| Chorismate synthase, chloroplast precursor, putative [Ricinus
           communis] gi|223530947|gb|EEF32805.1| Chorismate
           synthase, chloroplast precursor, putative [Ricinus
           communis]
          Length = 435

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 44/65 (67%), Positives = 53/65 (81%)
 Frame = -1

Query: 240 EVELMTRGRHDPCVVPRAVPMVEAMVALVLVDQLIGHHGQCQLFPINPAFQDPINLPKLE 61
           E EL+ RGRHDPCVVPRAVPMVEAMVALVLVDQL+  + QC +FPINP  Q+P+ LP+ E
Sbjct: 370 ETELIARGRHDPCVVPRAVPMVEAMVALVLVDQLMAQYAQCYMFPINPELQEPLKLPRAE 429

Query: 60  PANLS 46
             N++
Sbjct: 430 SVNMT 434


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