BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003622
         (1498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298397.1| predicted protein [Populus trichocarpa] gi|2...   417   e-114
ref|XP_003630949.1| 40S ribosomal protein S2 [Medicago truncatul...   414   e-113
ref|XP_003525227.1| PREDICTED: 40S ribosomal protein S2-4-like [...   414   e-113
ref|XP_002513493.1| 40S ribosomal protein S2, putative [Ricinus ...   412   e-112
ref|XP_002513481.1| 40S ribosomal protein S2, putative [Ricinus ...   412   e-112

>ref|XP_002298397.1| predicted protein [Populus trichocarpa] gi|222845655|gb|EEE83202.1|
            predicted protein [Populus trichocarpa]
          Length = 270

 Score =  417 bits (1071), Expect = e-114
 Identities = 204/236 (86%), Positives = 221/236 (93%), Gaps = 1/236 (0%)
 Frame = -2

Query: 1089 EEESKWVPVTKLGRLVENDKIKSLEQVYLHSLPVKEFQIIDKLL-PGLKDEVMKIMPVQK 913
            +EE KWVPVTKLGRLV + KI+SLEQ+YLHSLP+KE+QIID L+ PG+KDEVMKI PVQK
Sbjct: 35   DEEEKWVPVTKLGRLVRDGKIRSLEQIYLHSLPIKEYQIIDTLVGPGMKDEVMKITPVQK 94

Query: 912  QTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKI 733
            QTRAGQRTRFKAFVVVGD NGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKI
Sbjct: 95   QTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKI 154

Query: 732  GKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLG 553
            G+PHTVPCKVTGKCGSVTVRMVPAPRG+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLG
Sbjct: 155  GQPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLG 214

Query: 552  NFVKATFDCLLKTYGFLTPDFWRETKFSRSPFQEFTDYLVSNTKAVAIENVEKVEA 385
            NFVKATFDCLLKTYGFLTPDFW ET+F +SPFQEFTD L   TK + +E+VE+VEA
Sbjct: 215  NFVKATFDCLLKTYGFLTPDFWTETRFIKSPFQEFTDLLAKPTKTLVLEDVERVEA 270


>ref|XP_003630949.1| 40S ribosomal protein S2 [Medicago truncatula]
            gi|355524971|gb|AET05425.1| 40S ribosomal protein S2
            [Medicago truncatula]
          Length = 279

 Score =  414 bits (1065), Expect = e-113
 Identities = 206/236 (87%), Positives = 218/236 (92%), Gaps = 1/236 (0%)
 Frame = -2

Query: 1089 EEESKWVPVTKLGRLVENDKIKSLEQVYLHSLPVKEFQIIDKLL-PGLKDEVMKIMPVQK 913
            EEE KWVPVTKLGRLV+  KI+SLEQ+YLHSLP+KE QIID L+ P LKDEVMKIMPVQK
Sbjct: 44   EEEEKWVPVTKLGRLVKEGKIRSLEQIYLHSLPIKEHQIIDTLVGPTLKDEVMKIMPVQK 103

Query: 912  QTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKI 733
            QTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKI
Sbjct: 104  QTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKI 163

Query: 732  GKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLG 553
            GKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLG
Sbjct: 164  GKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLG 223

Query: 552  NFVKATFDCLLKTYGFLTPDFWRETKFSRSPFQEFTDYLVSNTKAVAIENVEKVEA 385
            NFVKATFDCL+KTYGFLTP+FW+ET+FS+SPFQE+TD L   T    I   E+VEA
Sbjct: 224  NFVKATFDCLMKTYGFLTPEFWKETRFSKSPFQEYTDLLAKPTAKALILEEERVEA 279


>ref|XP_003525227.1| PREDICTED: 40S ribosomal protein S2-4-like [Glycine max]
          Length = 272

 Score =  414 bits (1063), Expect = e-113
 Identities = 206/236 (87%), Positives = 218/236 (92%), Gaps = 1/236 (0%)
 Frame = -2

Query: 1089 EEESKWVPVTKLGRLVENDKIKSLEQVYLHSLPVKEFQIIDKLL-PGLKDEVMKIMPVQK 913
            +EE KWVPVTKLGRLV+  KI+SLEQ+YLHSLP+KE QIID L+ P LKDEVMKIMPVQK
Sbjct: 37   DEEEKWVPVTKLGRLVKEGKIRSLEQIYLHSLPIKEHQIIDTLVGPTLKDEVMKIMPVQK 96

Query: 912  QTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKI 733
            QTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKI
Sbjct: 97   QTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKI 156

Query: 732  GKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLG 553
            GKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLG
Sbjct: 157  GKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLG 216

Query: 552  NFVKATFDCLLKTYGFLTPDFWRETKFSRSPFQEFTDYLVSNTKAVAIENVEKVEA 385
            NFVKATFDCLLKTYGFLTP+FW+ET+FS+SPFQE+TD L   T    I   E+VEA
Sbjct: 217  NFVKATFDCLLKTYGFLTPEFWKETRFSKSPFQEYTDLLAKPTGKALILEEERVEA 272


>ref|XP_002513493.1| 40S ribosomal protein S2, putative [Ricinus communis]
            gi|223547401|gb|EEF48896.1| 40S ribosomal protein S2,
            putative [Ricinus communis]
          Length = 270

 Score =  412 bits (1059), Expect = e-112
 Identities = 207/236 (87%), Positives = 220/236 (93%), Gaps = 1/236 (0%)
 Frame = -2

Query: 1089 EEESKWVPVTKLGRLVENDKIKSLEQVYLHSLPVKEFQIIDKLL-PGLKDEVMKIMPVQK 913
            EEE KWVPVTKLGRLV+  KI+SLEQ+YLHSLP+KE QIID L+ P LKDEVMKI PVQK
Sbjct: 36   EEEEKWVPVTKLGRLVKEGKIRSLEQIYLHSLPIKEHQIIDTLVGPSLKDEVMKITPVQK 95

Query: 912  QTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKI 733
            QTRAGQRTRFKAFVVVGD NGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKI
Sbjct: 96   QTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKI 155

Query: 732  GKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLG 553
            GKPHTVPCKVTGKCGSVTVRMVPAPRG+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLG
Sbjct: 156  GKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLG 215

Query: 552  NFVKATFDCLLKTYGFLTPDFWRETKFSRSPFQEFTDYLVSNTKAVAIENVEKVEA 385
            NFVKATFDCLLKTYGFLTPDFWRET F++SPFQE+TD L   TK V IE+VE+V+A
Sbjct: 216  NFVKATFDCLLKTYGFLTPDFWRETHFTKSPFQEYTDLLGKPTK-VLIEDVERVDA 270


>ref|XP_002513481.1| 40S ribosomal protein S2, putative [Ricinus communis]
            gi|223547389|gb|EEF48884.1| 40S ribosomal protein S2,
            putative [Ricinus communis]
          Length = 273

 Score =  412 bits (1059), Expect = e-112
 Identities = 207/236 (87%), Positives = 220/236 (93%), Gaps = 1/236 (0%)
 Frame = -2

Query: 1089 EEESKWVPVTKLGRLVENDKIKSLEQVYLHSLPVKEFQIIDKLL-PGLKDEVMKIMPVQK 913
            EEE KWVPVTKLGRLV+  KI+SLEQ+YLHSLP+KE QIID L+ P LKDEVMKI PVQK
Sbjct: 36   EEEEKWVPVTKLGRLVKEGKIRSLEQIYLHSLPIKEHQIIDTLVGPSLKDEVMKITPVQK 95

Query: 912  QTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKI 733
            QTRAGQRTRFKAFVVVGD NGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKI
Sbjct: 96   QTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKI 155

Query: 732  GKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLG 553
            GKPHTVPCKVTGKCGSVTVRMVPAPRG+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLG
Sbjct: 156  GKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLG 215

Query: 552  NFVKATFDCLLKTYGFLTPDFWRETKFSRSPFQEFTDYLVSNTKAVAIENVEKVEA 385
            NFVKATFDCLLKTYGFLTPDFWRET F++SPFQE+TD L   TK V IE+VE+V+A
Sbjct: 216  NFVKATFDCLLKTYGFLTPDFWRETHFTKSPFQEYTDLLGKPTK-VLIEDVERVDA 270