BLASTX nr result
ID: Cimicifuga21_contig00003620
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00003620
(2462 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285332.1| PREDICTED: probable E3 ubiquitin-protein lig... 736 0.0
ref|XP_003601869.1| RCC1 domain-containing protein [Medicago tru... 730 0.0
emb|CAN77314.1| hypothetical protein VITISV_008041 [Vitis vinifera] 726 0.0
ref|XP_003551939.1| PREDICTED: probable E3 ubiquitin-protein lig... 724 0.0
ref|XP_002321983.1| predicted protein [Populus trichocarpa] gi|2... 724 0.0
>ref|XP_002285332.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 isoform 1
[Vitis vinifera] gi|296081404|emb|CBI16837.3| unnamed
protein product [Vitis vinifera]
Length = 534
Score = 736 bits (1900), Expect(2) = 0.0
Identities = 366/460 (79%), Positives = 392/460 (85%)
Frame = +1
Query: 805 ATCYFFRQPANFAPDFELSISELAALDMCRKRAIFKPMTTDEQESLKQRCGGSWKLVLRF 984
ATC FFRQPA+FAPDFELSISELAALDMC KRAIF+PM +E+E LKQRCGGSWKLVLRF
Sbjct: 76 ATCSFFRQPAHFAPDFELSISELAALDMCLKRAIFRPMMLEEREVLKQRCGGSWKLVLRF 135
Query: 985 LLAGEACCRREKSQAIAGPGHSIAVTSKGEVYSFGSNSSGQLGHGTLEEEWRPRPIRSLQ 1164
LLAGEACCRREKSQAIAGPGHSIAVT KG VYSFGSNSSGQLGHGT +EEWRPR IRSL+
Sbjct: 136 LLAGEACCRREKSQAIAGPGHSIAVTVKGAVYSFGSNSSGQLGHGTTDEEWRPRQIRSLE 195
Query: 1165 GVRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGGGQGTKLVMNPHRIESLKNIYVV 1344
G+RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG QGTKLV P +ESLKNI+VV
Sbjct: 196 GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV-QGTKLVTTPQLVESLKNIFVV 254
Query: 1345 QAAIGNFFTAVLSREGRVYTFSWGNDATLGHQTDTSDLEPHPLLGPLENIPVVQIXXXXX 1524
QAAIGNFFTAVLSREGRVYTFSWGNDA LGHQT+ +DLEPHPLLG LENIPVVQI
Sbjct: 255 QAAIGNFFTAVLSREGRVYTFSWGNDAKLGHQTEANDLEPHPLLGALENIPVVQIAAGYC 314
Query: 1525 XXXXXXXXXXXMSVYSVXXXXXXXXXXXSRTDERYPRLIEQFQTLNLQPMXXXXXXXXXX 1704
MSVYSV +RTDE++PRLIEQF+ LNLQPM
Sbjct: 315 YLLALACQPNGMSVYSVGCGLGGKLGHGTRTDEKHPRLIEQFRILNLQPMVVAAGAWHAA 374
Query: 1705 XXXRDGRVCTWGWGRYGCLGHGNEECESVPKVVESLTSIKAVHVATGDYTTFVVSEEGDV 1884
RDGRVCTWGWGRYGCLGHGNEECESVPKVVE+L ++KAVHVATGDYTTFVVS++GDV
Sbjct: 375 VVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALINVKAVHVATGDYTTFVVSDDGDV 434
Query: 1885 YSFGCGESSSLGHNPGVDGQENRHTNVLTPELVTSLKQVNERVVQISLTNSIYWNAHTFA 2064
YSFGCGESSSLGHN G DGQ NRH N+L+PELVTSLKQ+ ER+VQISLTNSIYWNAHTFA
Sbjct: 435 YSFGCGESSSLGHNNGPDGQGNRHANILSPELVTSLKQIKERMVQISLTNSIYWNAHTFA 494
Query: 2065 LTESGKLYAFGAGDKGQLGIELVGQQNERGNPERVDIDLS 2184
LTE+GKLYAFGAGDKGQLG+ELV Q ERGNPERVDIDLS
Sbjct: 495 LTETGKLYAFGAGDKGQLGVELVANQTERGNPERVDIDLS 534
Score = 133 bits (335), Expect(2) = 0.0
Identities = 62/76 (81%), Positives = 69/76 (90%)
Frame = +2
Query: 530 MDATTSGTPSIQYHNIVDQTIASLVVSPPPTFQRQQRHCSGESTPGEFPLAANPSIVLHV 709
MDAT SGTP++QYHNI DQ IA++V SP PTFQRQQRHC G+S+PGEFPLAANPSIVLHV
Sbjct: 1 MDATRSGTPTVQYHNIPDQPIAAIVTSPLPTFQRQQRHCFGDSSPGEFPLAANPSIVLHV 60
Query: 710 LTGCNLDPQDLAKLEA 757
LT CNL+PQDLAKLEA
Sbjct: 61 LTACNLEPQDLAKLEA 76
>ref|XP_003601869.1| RCC1 domain-containing protein [Medicago truncatula]
gi|355490917|gb|AES72120.1| RCC1 domain-containing
protein [Medicago truncatula]
Length = 535
Score = 730 bits (1885), Expect(2) = 0.0
Identities = 357/459 (77%), Positives = 393/459 (85%)
Frame = +1
Query: 805 ATCYFFRQPANFAPDFELSISELAALDMCRKRAIFKPMTTDEQESLKQRCGGSWKLVLRF 984
ATC FFRQPANFAPDF LS++ELAA DMC KRAIFKPMTT+E++ LKQRCGGSWKLVLR+
Sbjct: 77 ATCSFFRQPANFAPDFALSLAELAAFDMCMKRAIFKPMTTEERQDLKQRCGGSWKLVLRY 136
Query: 985 LLAGEACCRREKSQAIAGPGHSIAVTSKGEVYSFGSNSSGQLGHGTLEEEWRPRPIRSLQ 1164
LLAGEACCRREKSQAIAGPGHSIAVTSKG+VYSFGSNSSGQLGHGT EEEWRP+PIR+LQ
Sbjct: 137 LLAGEACCRREKSQAIAGPGHSIAVTSKGDVYSFGSNSSGQLGHGTTEEEWRPKPIRTLQ 196
Query: 1165 GVRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGGGQGTKLVMNPHRIESLKNIYVV 1344
G+RIIQAAAGAGRTMLI+D+GQVYAFGKDSFGEAEYGG QG+K V+ P +ESLKNI+VV
Sbjct: 197 GIRIIQAAAGAGRTMLITDSGQVYAFGKDSFGEAEYGG-QGSKTVIAPRLVESLKNIFVV 255
Query: 1345 QAAIGNFFTAVLSREGRVYTFSWGNDATLGHQTDTSDLEPHPLLGPLENIPVVQIXXXXX 1524
QAAIGNFFTAVLSREGRVYTFSWG+D LGH TD++D+EPHPLLG LE+IPVVQI
Sbjct: 256 QAAIGNFFTAVLSREGRVYTFSWGSDGKLGHHTDSNDMEPHPLLGALEDIPVVQIAAGYC 315
Query: 1525 XXXXXXXXXXXMSVYSVXXXXXXXXXXXSRTDERYPRLIEQFQTLNLQPMXXXXXXXXXX 1704
MSVYSV +RTDE++PRLIEQFQTLNLQPM
Sbjct: 316 YLLCLACQPSGMSVYSVGCGLGGKLGHGTRTDEKFPRLIEQFQTLNLQPMVISAGAWHAA 375
Query: 1705 XXXRDGRVCTWGWGRYGCLGHGNEECESVPKVVESLTSIKAVHVATGDYTTFVVSEEGDV 1884
RDGRVCTWGWGRYGCLGHGNEECE+ PKVV++LT++KAVHVATGDYTTFVV+E+GDV
Sbjct: 376 VVGRDGRVCTWGWGRYGCLGHGNEECEAAPKVVDALTNVKAVHVATGDYTTFVVAEDGDV 435
Query: 1885 YSFGCGESSSLGHNPGVDGQENRHTNVLTPELVTSLKQVNERVVQISLTNSIYWNAHTFA 2064
YSFGCGES+SLGHN +D + NRH NVL PELVTSLKQ+NERVVQISLTNSIYWNAHTFA
Sbjct: 436 YSFGCGESASLGHNAVIDAEGNRHANVLNPELVTSLKQINERVVQISLTNSIYWNAHTFA 495
Query: 2065 LTESGKLYAFGAGDKGQLGIELVGQQNERGNPERVDIDL 2181
LTESGKLYAFGAGDKGQLGIELV Q ER NPE+VDIDL
Sbjct: 496 LTESGKLYAFGAGDKGQLGIELVANQTERVNPEQVDIDL 534
Score = 130 bits (327), Expect(2) = 0.0
Identities = 63/77 (81%), Positives = 69/77 (89%), Gaps = 1/77 (1%)
Frame = +2
Query: 530 MDATTSGTPSIQYHNIVDQTIASLVVSPP-PTFQRQQRHCSGESTPGEFPLAANPSIVLH 706
MDATTSGTP+IQYHNI DQTI ++VV+ P PTFQRQQR C G STPGEFPL+A+PSIVLH
Sbjct: 1 MDATTSGTPTIQYHNITDQTITAIVVATPLPTFQRQQRQCLGNSTPGEFPLSASPSIVLH 60
Query: 707 VLTGCNLDPQDLAKLEA 757
VLT CNLDPQDLAKLEA
Sbjct: 61 VLTSCNLDPQDLAKLEA 77
>emb|CAN77314.1| hypothetical protein VITISV_008041 [Vitis vinifera]
Length = 541
Score = 726 bits (1875), Expect(2) = 0.0
Identities = 361/454 (79%), Positives = 386/454 (85%)
Frame = +1
Query: 805 ATCYFFRQPANFAPDFELSISELAALDMCRKRAIFKPMTTDEQESLKQRCGGSWKLVLRF 984
ATC FFRQPA+FAPDFELSISELAALDMC KRAIF+PM +E+E LKQRCGGSWKLVLRF
Sbjct: 78 ATCSFFRQPAHFAPDFELSISELAALDMCLKRAIFRPMXLEEREVLKQRCGGSWKLVLRF 137
Query: 985 LLAGEACCRREKSQAIAGPGHSIAVTSKGEVYSFGSNSSGQLGHGTLEEEWRPRPIRSLQ 1164
LLAGEACCRREKSQAIAGPGHSIAVT KG VYSFGSNSSGQLGHGT +EEWRPR IRSL+
Sbjct: 138 LLAGEACCRREKSQAIAGPGHSIAVTVKGAVYSFGSNSSGQLGHGTTDEEWRPRQIRSLE 197
Query: 1165 GVRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGGGQGTKLVMNPHRIESLKNIYVV 1344
G+RIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYG QGTKLV P +ESLKNI+VV
Sbjct: 198 GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGV-QGTKLVTTPQLVESLKNIFVV 256
Query: 1345 QAAIGNFFTAVLSREGRVYTFSWGNDATLGHQTDTSDLEPHPLLGPLENIPVVQIXXXXX 1524
QAAIGNFFTAVLSREGRVYTFSWGNDA LGHQT+ +DLEPHPLLG LENIPVVQI
Sbjct: 257 QAAIGNFFTAVLSREGRVYTFSWGNDAKLGHQTEANDLEPHPLLGALENIPVVQIAAGYC 316
Query: 1525 XXXXXXXXXXXMSVYSVXXXXXXXXXXXSRTDERYPRLIEQFQTLNLQPMXXXXXXXXXX 1704
MSVYSV +RTDE++PRLIEQFQ LNLQPM
Sbjct: 317 YLLALACQPNGMSVYSVGCGLGGKLGHGTRTDEKHPRLIEQFQILNLQPMVVAAGAWHAA 376
Query: 1705 XXXRDGRVCTWGWGRYGCLGHGNEECESVPKVVESLTSIKAVHVATGDYTTFVVSEEGDV 1884
RDGRVCTWGWGRYGCLGHGNEECESVPKVVE+L ++KAVHVATGDYTTFVVS++GDV
Sbjct: 377 VVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALINVKAVHVATGDYTTFVVSDDGDV 436
Query: 1885 YSFGCGESSSLGHNPGVDGQENRHTNVLTPELVTSLKQVNERVVQISLTNSIYWNAHTFA 2064
YSFGCGESSSLGHN G DGQ NRH N+L+PELVTSLKQ+ ER+VQISLTNSIYWNAHTFA
Sbjct: 437 YSFGCGESSSLGHNNGPDGQGNRHANILSPELVTSLKQIKERMVQISLTNSIYWNAHTFA 496
Query: 2065 LTESGKLYAFGAGDKGQLGIELVGQQNERGNPER 2166
LTE+GKLYAFGAGDKGQLG+ELV Q ERGNPER
Sbjct: 497 LTETGKLYAFGAGDKGQLGVELVXNQTERGNPER 530
Score = 133 bits (335), Expect(2) = 0.0
Identities = 62/76 (81%), Positives = 69/76 (90%)
Frame = +2
Query: 530 MDATTSGTPSIQYHNIVDQTIASLVVSPPPTFQRQQRHCSGESTPGEFPLAANPSIVLHV 709
MDAT SGTP++QYHNI DQ IA++V SP PTFQRQQRHC G+S+PGEFPLAANPSIVLHV
Sbjct: 1 MDATRSGTPTVQYHNIPDQPIAAIVTSPLPTFQRQQRHCFGDSSPGEFPLAANPSIVLHV 60
Query: 710 LTGCNLDPQDLAKLEA 757
LT CNL+PQDLAKLEA
Sbjct: 61 LTACNLEPQDLAKLEA 76
>ref|XP_003551939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 535
Score = 724 bits (1868), Expect(2) = 0.0
Identities = 360/460 (78%), Positives = 390/460 (84%), Gaps = 1/460 (0%)
Frame = +1
Query: 805 ATCYFFRQPANFAPDFELSISELAALDMCRKRAIFKPMTTDEQESLKQRCGGSWKLVLRF 984
ATC FFRQPANFAPD +LS+SELAALDMC+KRAIFKPMTT++++ LK RCGGSWKL LR+
Sbjct: 76 ATCSFFRQPANFAPDLDLSLSELAALDMCQKRAIFKPMTTEQRQDLKLRCGGSWKLALRY 135
Query: 985 LLAGEACCRREKSQAIAGPGHSIAVTSKGEVYSFGSNSSGQLGHGTLEEEWRPRPIRSLQ 1164
L+AGEACCRREKSQAIAGPGHSIAVTSKG VYSFGSNSSGQLGHGT +EEWRPRPIR+LQ
Sbjct: 136 LMAGEACCRREKSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTDEEWRPRPIRTLQ 195
Query: 1165 GVRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGGGQGTKLVMNPHRIESLKNIYVV 1344
G+RIIQAAAGAGRTML+SD+GQVYAFGKDSFGEAEY G QG+K V P +ESLKNI+VV
Sbjct: 196 GIRIIQAAAGAGRTMLVSDSGQVYAFGKDSFGEAEY-GVQGSKTVAAPQIVESLKNIFVV 254
Query: 1345 QAAIGNFFTAVLSREGRVYTFSWGNDATLGHQTDTSDLEPHPLLGPLENIPVVQIXXXXX 1524
QAAIGNFFTAVLSREGRVYTFSWG+D LGH TD SD+EPHPLLG LENIPVVQI
Sbjct: 255 QAAIGNFFTAVLSREGRVYTFSWGSDGKLGHHTDQSDVEPHPLLGALENIPVVQIAAGYC 314
Query: 1525 XXXXXXXXXXXMSVYSVXXXXXXXXXXXSRTDERYPRLIEQFQTLNLQPMXXXXXXXXXX 1704
MSVYSV SRTDE+YPRLIEQF LNLQPM
Sbjct: 315 YLLCLACQPSGMSVYSVGCGLGGKLGHGSRTDEKYPRLIEQFGLLNLQPMVVAAGAWHAA 374
Query: 1705 XXXRDGRVCTWGWGRYGCLGHGNEECESVPKVVESLTSIKAVHVATGDYTTFVVSEEGDV 1884
RDGRVCTWGWGRYGCLGHGNEECESVPKVVE+L+++KAVHVATGDYTTFVVS++GDV
Sbjct: 375 VVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALSNVKAVHVATGDYTTFVVSDDGDV 434
Query: 1885 YSFGCGESSSLGHN-PGVDGQENRHTNVLTPELVTSLKQVNERVVQISLTNSIYWNAHTF 2061
YSFGCGES+SLGHN G D Q NRH NVL+PELVTSLKQ+NERVVQISLTNSIYWNAHTF
Sbjct: 435 YSFGCGESASLGHNAAGNDEQGNRHANVLSPELVTSLKQINERVVQISLTNSIYWNAHTF 494
Query: 2062 ALTESGKLYAFGAGDKGQLGIELVGQQNERGNPERVDIDL 2181
ALTESGKLYAFGAGDKGQLGIELV Q ERGNPERV+IDL
Sbjct: 495 ALTESGKLYAFGAGDKGQLGIELVANQTERGNPERVEIDL 534
Score = 133 bits (334), Expect(2) = 0.0
Identities = 60/76 (78%), Positives = 69/76 (90%)
Frame = +2
Query: 530 MDATTSGTPSIQYHNIVDQTIASLVVSPPPTFQRQQRHCSGESTPGEFPLAANPSIVLHV 709
MDATTSGTP++QYHNI DQ I +++ +P PTFQRQQRHC G+STPGEFPL+ANPSIVLHV
Sbjct: 1 MDATTSGTPTVQYHNIPDQPITAIIATPLPTFQRQQRHCFGDSTPGEFPLSANPSIVLHV 60
Query: 710 LTGCNLDPQDLAKLEA 757
LT CNL+PQDLAKLEA
Sbjct: 61 LTACNLEPQDLAKLEA 76
>ref|XP_002321983.1| predicted protein [Populus trichocarpa] gi|222868979|gb|EEF06110.1|
predicted protein [Populus trichocarpa]
Length = 538
Score = 724 bits (1869), Expect(2) = 0.0
Identities = 358/459 (77%), Positives = 388/459 (84%)
Frame = +1
Query: 805 ATCYFFRQPANFAPDFELSISELAALDMCRKRAIFKPMTTDEQESLKQRCGGSWKLVLRF 984
ATC FFRQPA+FAPD+ELS+SELAALDMC+KRAIFKPMT +E++ LKQRCGGSWKLVLRF
Sbjct: 80 ATCSFFRQPASFAPDYELSMSELAALDMCQKRAIFKPMTPEERQDLKQRCGGSWKLVLRF 139
Query: 985 LLAGEACCRREKSQAIAGPGHSIAVTSKGEVYSFGSNSSGQLGHGTLEEEWRPRPIRSLQ 1164
LLAGEACCRRE+SQAIAGPGHSIAVTS G YSFGSNSSGQLGHGT EEEWRPR IRSLQ
Sbjct: 140 LLAGEACCRRERSQAIAGPGHSIAVTSNGVAYSFGSNSSGQLGHGTTEEEWRPRQIRSLQ 199
Query: 1165 GVRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGGGQGTKLVMNPHRIESLKNIYVV 1344
G+RIIQAAAG GRTMLISDAG+VYAFGKDSFGEAEYG QGTK V P +ESLKNI+VV
Sbjct: 200 GIRIIQAAAGPGRTMLISDAGEVYAFGKDSFGEAEYGV-QGTKTVTTPQLVESLKNIFVV 258
Query: 1345 QAAIGNFFTAVLSREGRVYTFSWGNDATLGHQTDTSDLEPHPLLGPLENIPVVQIXXXXX 1524
QAAIGNFFTAVLSREGRVYTFSWGND LGHQT+ +D+ PHPLLG LENIPVVQI
Sbjct: 259 QAAIGNFFTAVLSREGRVYTFSWGNDGKLGHQTEPNDVVPHPLLGALENIPVVQIAAGYC 318
Query: 1525 XXXXXXXXXXXMSVYSVXXXXXXXXXXXSRTDERYPRLIEQFQTLNLQPMXXXXXXXXXX 1704
MSVYSV SRTDE+YPRLIEQFQ LNLQPM
Sbjct: 319 YLLALACQPSGMSVYSVGCGLGGKLGHGSRTDEKYPRLIEQFQLLNLQPMVVAAGAWHAA 378
Query: 1705 XXXRDGRVCTWGWGRYGCLGHGNEECESVPKVVESLTSIKAVHVATGDYTTFVVSEEGDV 1884
RDGRVCTWGWGRYGCLGHGNEECESVPKVV++L+ +KAVHVATGDYTTFVVS++GDV
Sbjct: 379 VVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVDALSKVKAVHVATGDYTTFVVSDDGDV 438
Query: 1885 YSFGCGESSSLGHNPGVDGQENRHTNVLTPELVTSLKQVNERVVQISLTNSIYWNAHTFA 2064
YSFGCGES+SLGHN DGQ NRHTNVL+PELVTSLK+V ERVVQISLTNS+YWNAHTFA
Sbjct: 439 YSFGCGESASLGHNGDGDGQGNRHTNVLSPELVTSLKEVKERVVQISLTNSVYWNAHTFA 498
Query: 2065 LTESGKLYAFGAGDKGQLGIELVGQQNERGNPERVDIDL 2181
LTESGKL+AFGAGDKGQLG+ELV Q ERGNPE+VD+DL
Sbjct: 499 LTESGKLFAFGAGDKGQLGMELVNNQTERGNPEQVDVDL 537
Score = 125 bits (315), Expect(2) = 0.0
Identities = 58/76 (76%), Positives = 65/76 (85%)
Frame = +2
Query: 530 MDATTSGTPSIQYHNIVDQTIASLVVSPPPTFQRQQRHCSGESTPGEFPLAANPSIVLHV 709
MD+TTSGTP+IQYHNI DQ + ++V P T+QR QRHC G+S PGEFPLAANPSIVLHV
Sbjct: 1 MDSTTSGTPTIQYHNITDQPVTAIVAVPVSTYQRNQRHCFGDSIPGEFPLAANPSIVLHV 60
Query: 710 LTGCNLDPQDLAKLEA 757
LT CNLDPQDLAKLEA
Sbjct: 61 LTTCNLDPQDLAKLEA 76