BLASTX nr result
ID: Cimicifuga21_contig00003607
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00003607
(1563 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002524917.1| exonuclease, putative [Ricinus communis] gi|... 449 e-124
ref|XP_003550038.1| PREDICTED: small RNA degrading nuclease 3-li... 441 e-121
ref|XP_004141901.1| PREDICTED: small RNA degrading nuclease 3-li... 431 e-118
gb|AFK41173.1| unknown [Lotus japonicus] 430 e-118
ref|XP_002278458.2| PREDICTED: small RNA degrading nuclease 3-li... 387 e-105
>ref|XP_002524917.1| exonuclease, putative [Ricinus communis] gi|223535752|gb|EEF37414.1|
exonuclease, putative [Ricinus communis]
Length = 504
Score = 449 bits (1155), Expect = e-124
Identities = 244/494 (49%), Positives = 339/494 (68%), Gaps = 8/494 (1%)
Frame = +1
Query: 79 MDEIILTAEKEVLEAVVKMAQKQRLKGDKGDWKEFLSVHDRKTGHTMSDPAKRSIDDLVS 258
M+ + T +++L +VK+AQKQ KG +G WKEFL+V+D+K G ++SDPAKR+ LVS
Sbjct: 1 MENKLATVPEKILVEIVKLAQKQGRKGTQGGWKEFLNVYDKKIGSSLSDPAKRTRPTLVS 60
Query: 259 FLKTFSDEEVLKFLAKMAHSLSENKSRARLISSSTEDDSPQQKLVRLTIVHPAYILDYAS 438
FL+TF+ + LKF+ + S + ++ S +++SP+Q+LVRLT+ HP Y+ YA
Sbjct: 61 FLQTFTHKSDLKFVDYVLRLHSNREVLDQIRQESPDNESPEQRLVRLTVEHPFYLSKYAF 120
Query: 439 GPKNEEWAFTGPGRISKAGKSNSMVAVDCEMVLCQDGTEAVVKVCVVDENMEVKLNELVN 618
++ W T + SK ++S++A+DCEMVLC+DGTEA+V+VCVVD N++VKL+E VN
Sbjct: 121 PSYDQGWVVTKLPKKSKLMSTDSIIAIDCEMVLCEDGTEALVRVCVVDRNLQVKLDEKVN 180
Query: 619 PNKAVADYRTKITGISSEDLEGVTCSLANIQKKMKKLLRNGTILVGHSLYNDLRALKLDH 798
P K VADYRT+ITG+++ DL+GV+CSLA+IQK MKKLL+ GTILVGH LYNDL+ALKLDH
Sbjct: 181 PYKPVADYRTEITGVTARDLDGVSCSLADIQKFMKKLLQKGTILVGHGLYNDLQALKLDH 240
Query: 799 ARVIDTSYIFDTPDHRRPSLNDLCKTVLGYEVRKDGAPHNCLDDAQAAMKLVLAKLEGRS 978
ARV+DTS+IF D R PSL+ LCK+VLG+E+RK GAPHNC+DDA AAMKL LAK+E
Sbjct: 241 ARVVDTSFIFRRLDGRPPSLDTLCKSVLGFELRKGGAPHNCMDDASAAMKLFLAKIERGV 300
Query: 979 ESSIALAAKDVPES--AKLLIHGIPRGVRKEELLRIFPD-FTFELQPRMTRRQQQKYSVI 1149
++ I + + V E+ AKLL+HGIP V EEL R+FP+ FT EL+P R Q YS +
Sbjct: 301 DNDIPVNHEHVLENELAKLLLHGIPTDVHSEELHRVFPEQFTIELKPPKKGRVQ--YSAL 358
Query: 1150 AVFKDPKDADEAFDSIERQVEKDSVGYPQKLVIFELSTGIPTTVSVRKMVLDGSHEQPNS 1329
A+FKDP++A AFD++ ++EKD G QK++ +L TG + VRKM D Q
Sbjct: 359 AIFKDPQEAHCAFDNLNGRLEKDKNGLLQKMITLKLKTGATANLYVRKMGHDHFIHQ--- 415
Query: 1330 SNKPITVKKKSKKRSAEVENQDELKKAKMDLSPCEDHIGEIERLKKELRQK-----DDEV 1494
KKR+ + E+ KK K D C+DH+ EIERLK+EL++K DD +
Sbjct: 416 --------DLQKKRAFQGEDIGNTKKLKRD--DCDDHVKEIERLKQELKEKDLSKCDDHM 465
Query: 1495 ASLQKILAALTRKQ 1536
++K+ L+ K+
Sbjct: 466 KEIEKLKQNLSSKE 479
>ref|XP_003550038.1| PREDICTED: small RNA degrading nuclease 3-like [Glycine max]
Length = 509
Score = 441 bits (1135), Expect = e-121
Identities = 257/510 (50%), Positives = 334/510 (65%), Gaps = 24/510 (4%)
Frame = +1
Query: 79 MDEIILTAEKEVLEAVVKMAQKQRLKGDKGDWKEFLSVHDRKTGHTMSDPAKRSIDDLVS 258
M++ I TA+K+VL +VK+AQK+ LKG+ G WKEFL+ HD+K G +SDP+KRS + L +
Sbjct: 1 MEDKIETADKKVLVDIVKLAQKRGLKGNLGGWKEFLNSHDKKFGAGLSDPSKRSHEVLAA 60
Query: 259 FLKTFSDEEVLKFLAKMAHSLSENKSRARLISSSTEDDSPQQKLVRLTIVHPAYILDYAS 438
FLKTFS EE LKF + S RL S DSP+Q+LV+ T+ HP Y LDY+
Sbjct: 61 FLKTFSKEEDLKFFDNIMRHHSNQYMLERLKDKS--HDSPEQRLVQATLQHPLYPLDYSF 118
Query: 439 GPKNEEWAFTGPGRISKAGKSNSMVAVDCEMVLCQDGTEAVVKVCVVDENMEVKLNELVN 618
+E W K KS MVAVDCEMVLC+DGTEAVVKVCVVD N+EVKL++LV
Sbjct: 119 PSIDEGWIVVNFKNKPKVMKSTEMVAVDCEMVLCEDGTEAVVKVCVVDHNLEVKLDKLVK 178
Query: 619 PNKAVADYRTKITGISSEDLEGVTCSLANIQKKMKKLLRNGTILVGHSLYNDLRALKLDH 798
P+K +ADYRT+ITG+SS+DLE VTCSLA+IQK MKKLL +G ILVGHSL+NDLR LKLDH
Sbjct: 179 PDKEIADYRTEITGVSSQDLEAVTCSLADIQKYMKKLLSSGIILVGHSLHNDLRVLKLDH 238
Query: 799 ARVIDTSYIFDTPD---HRRPSLNDLCKTVLGYEVRKDGAPHNCLDDAQAAMKLVLAKLE 969
RVIDTSYIF + D H+RPSLN LC+ VL +EVR+ GAPHNCLDDA+AAM LVLAK++
Sbjct: 239 VRVIDTSYIFQSLDGSIHKRPSLNSLCQAVLHHEVREKGAPHNCLDDAKAAMDLVLAKIK 298
Query: 970 G--RSESSIALAAKDVPES--AKLLIHGIPRGVRKEELLRIFP-DFTFELQPRMTRRQQQ 1134
E IAL + VPES AKLL+H IP V E L +I P +F EL+P + Q
Sbjct: 299 HGVDKEFPIALVQEHVPESELAKLLLHKIPNTVNIETLHKILPGNFKIELKP-SRKGQGA 357
Query: 1135 KYSVIAVFKDPKDADEAFDSIERQVEKDSVGYPQKLVIFELSTGIPTTVSVRKMVLDGSH 1314
YS A+F+ P +AD A+++++ KD+ G+PQKLV F LSTG+ + VRKMV + +
Sbjct: 358 NYSAFAIFRSPPEADGAYENVQGSQLKDTYGHPQKLVTFRLSTGLSVNLFVRKMVTEEPN 417
Query: 1315 EQPNSS-----NKPITVKKKSKKRSAEVENQDELKKAKMDLSPCEDHIGE---------- 1449
+Q S N+ + V KK+ K ++E K D I
Sbjct: 418 DQTPSKRALQINEAVDVSKKA-KMDPKIEEDASAGFGKGDTDAHSKEIEALNQQLKQSEM 476
Query: 1450 -IERLKKELRQKDDEVASLQKILAALTRKQ 1536
IE L+K+L QKD E++ L K++++ +K+
Sbjct: 477 VIESLRKQLTQKDFEISMLHKMISSKKKKK 506
>ref|XP_004141901.1| PREDICTED: small RNA degrading nuclease 3-like [Cucumis sativus]
gi|449517369|ref|XP_004165718.1| PREDICTED: small RNA
degrading nuclease 3-like [Cucumis sativus]
Length = 524
Score = 431 bits (1107), Expect = e-118
Identities = 245/515 (47%), Positives = 343/515 (66%), Gaps = 31/515 (6%)
Frame = +1
Query: 79 MDEIILTAEKEVLEAVVKMAQKQRLKGDKGDWKEFLSVHDRKTGHTMSDPAKRSIDDLVS 258
M++ I TAEK+VL +V++ QK+ + G +GDWKEFL+ D K G +MSDP+KR D L++
Sbjct: 1 MEDKIATAEKKVLVEMVRLTQKRGMTGSEGDWKEFLNSRDPKFGASMSDPSKRPNDLLIA 60
Query: 259 FLKTFSDEEVLKFLAKMAHSLSENKSRARLISSST-EDDSPQQKLVRLTIVHPAYILDYA 435
FLKTF EE L FL K+ +E ++ + +S T E++SP+QKLVRLT+ HP Y L+Y+
Sbjct: 61 FLKTFDKEEDLMFLDKV-FQCNEKRNFVKQVSQITPENESPEQKLVRLTLEHPQYPLEYS 119
Query: 436 SGPKNEEWAFTGPGRISKAGKSNSMVAVDCEMVLCQDGTEAVVKVCVVDENMEVKLNELV 615
++EW T + SK SN + A+DCEMVLC+DGTE +V+VC+VD +++VK++ELV
Sbjct: 120 FPSYDKEWVVTKFSQKSKGPNSNLIYAIDCEMVLCEDGTENLVRVCMVDRDLQVKIDELV 179
Query: 616 NPNKAVADYRTKITGISSEDLEGVTCSLANIQKKMKKLLRNG-TILVGHSLYNDLRALKL 792
P KA+ DYRT ITGIS DL+GV+CSLA++QK + K L +G TILVGHSL NDL+ALKL
Sbjct: 180 KPRKAIKDYRTDITGISPGDLDGVSCSLADVQKSITKFLSHGRTILVGHSLNNDLQALKL 239
Query: 793 DHARVIDTSYIFDTPD---HRRPSLNDLCKTVLGYEVRKDGAPHNCLDDAQAAMKLVLAK 963
DH+RVIDTS+IF + +RRPSL+ LCK+VLGY++RK+GAPHNCLDDAQAAMKLVLAK
Sbjct: 240 DHSRVIDTSFIFKYSNGSIYRRPSLSKLCKSVLGYDLRKEGAPHNCLDDAQAAMKLVLAK 299
Query: 964 LEGRSESSIALAAKDVPE--SAKLLIHGIPRGVRKEELLR-IFPDFTFELQPRMTRRQQQ 1134
LE +++ IA+ +D P+ KLL+H IP V E L + I DFT EL+P +
Sbjct: 300 LESKADDGIAIVDEDTPQVGMEKLLLHRIPINVPSEALAKAIHGDFTIELKPPKKGQGGD 359
Query: 1135 KYSVIAVFKDPKDADEAFDSIERQVEKDSVGYPQKLVIFELSTGIPTTVSVRKM------ 1296
YS +A+F++PK+A +AF+ +E +DS G PQKL+ F+ S I ++ VRKM
Sbjct: 360 IYSALAIFQNPKEALQAFEEVEGNAYEDSSGRPQKLIRFQHSGSI-VSIYVRKMGQKDFM 418
Query: 1297 -----------VLDG---SHEQPNSSNKPITVKKKSKKRSAEVENQDELK---KAKMDLS 1425
V++ S +Q ++ I S + VE + LK K K D +
Sbjct: 419 DNFSSKKRDLEVIENIVMSKKQKTANKMEIETISNSSRCCNHVEEVERLKQELKQKEDSN 478
Query: 1426 PCEDHIGEIERLKKELRQKDDEVASLQKILAALTR 1530
C DH+ E+E LK+ELR+KD E++ L+K + + +
Sbjct: 479 HCCDHLNEVESLKEELRRKDYELSILRKAITIVKK 513
>gb|AFK41173.1| unknown [Lotus japonicus]
Length = 525
Score = 430 bits (1105), Expect = e-118
Identities = 245/495 (49%), Positives = 333/495 (67%), Gaps = 16/495 (3%)
Frame = +1
Query: 79 MDEIILTAEKEVLEAVVKMAQKQRLKGDKGDWKEFLSVHDRKTGHTMSDPAKRSIDDLVS 258
MD+ I A+K+VL +VK++QK+ +KG+ GDWKEFL+ +D+K G +MSDPAKR+ + L +
Sbjct: 4 MDDKIDAADKKVLVDIVKLSQKRGMKGNLGDWKEFLNSYDKKFGASMSDPAKRTHEVLAA 63
Query: 259 FLKTFSDEEVLKFLAKMAHSLSENKSRARLISSSTEDDSPQQKLVRLTIVHPAYILDYAS 438
FLKTFS E+ LKF A + S S +L S DSP+Q LV++T+ HP Y LDY+
Sbjct: 64 FLKTFSKEDDLKFFANIMRHHSNQYSVEKLKDKS--HDSPEQGLVQITLQHPLYPLDYSF 121
Query: 439 GPKNEEWAFTGPGRISKAGKSNSMVAVDCEMVLCQDGTEAVVKVCVVDENMEVKLNELVN 618
+E W + KA +S +MVAVDCEMVLC+DGTEA+V+VCVVD N++VKL++ V
Sbjct: 122 QSIDEGWVIINLRKNKKAMRSTAMVAVDCEMVLCEDGTEALVEVCVVDHNLKVKLHKRVK 181
Query: 619 PNKAVADYRTKITGISSEDLEGVTCSLANIQKKMKKLLRNGTILVGHSLYNDLRALKLDH 798
P+KA+ DYRT++TG+SS DLE VTC+LA+IQKKMK+LL NGTILVGHSL NDLR LKLDH
Sbjct: 182 PDKAIVDYRTEVTGVSSRDLETVTCTLADIQKKMKRLLSNGTILVGHSLDNDLRVLKLDH 241
Query: 799 ARVIDTSYIFDT---PDHRRPSLNDLCKTVLGYEVRKDGAPHNCLDDAQAAMKLVLAKLE 969
RV+DT+YIF + HR+PSLN LC+ VLGYEVR+ GAPHNCLDDA AAMKLVLA+++
Sbjct: 242 VRVVDTAYIFQSLGGSIHRKPSLNGLCQAVLGYEVREKGAPHNCLDDACAAMKLVLARIK 301
Query: 970 G--RSESSIALAAKDVPES--AKLLIHGIPRGVRKEELLRIFP-DFTFELQPRMTRRQQQ 1134
E L + V ES KL +HGIP V E L +I P DFT E++P + Q+
Sbjct: 302 HGVDKEFPFTLVQEHVSESDMTKLPLHGIPTSVNIETLHKIVPGDFTTEVKP-SRKGQRA 360
Query: 1135 KYSVIAVFKDPKDADEAFDSIERQVEKDSVGYPQKLVIFELSTGIPTTVSVRKMVLDGSH 1314
KYS +A FK+ ++A EA+++++ KDS G PQK V+F STG+ ++ VRKM D
Sbjct: 361 KYSALATFKNQQEAYEAYENVQGSQTKDSFGRPQKEVMFRPSTGMTVSLFVRKMTADEPD 420
Query: 1315 E--------QPNSSNKPITVKKKSKKRSAEVENQDELKKAKMDLSPCEDHIGEIERLKKE 1470
Q + +++ + KK+ K ++E + K D H+ EIE L ++
Sbjct: 421 NLLQSKRALQVDEADEAVNASKKA-KTVPQIEEDVLIGSTKGDTC---THLKEIEALNEQ 476
Query: 1471 LRQKDDEVASLQKIL 1515
L+QKD E+ SL++ L
Sbjct: 477 LKQKDLEIESLREQL 491
>ref|XP_002278458.2| PREDICTED: small RNA degrading nuclease 3-like [Vitis vinifera]
Length = 389
Score = 387 bits (993), Expect = e-105
Identities = 201/349 (57%), Positives = 259/349 (74%), Gaps = 6/349 (1%)
Frame = +1
Query: 79 MDEIILTAEKEVLEAVVKMAQKQRLKGDKGDWKEFLSVHDRKTGHTMSDPAKRSIDDLVS 258
MD ++ AEKEVL +VK+AQK+ L+G KG WK+FLS +DRK G ++SDP++R +D LVS
Sbjct: 1 MDNTLVNAEKEVLVEMVKLAQKRGLEGSKGSWKDFLSTYDRKLGPSLSDPSRRPVDTLVS 60
Query: 259 FLKTFSDEEVLKFLAKMAHSLSENKSRARLISSSTEDDSPQQKLVRLTIVHPAYILDYAS 438
FLKTFS EE LKF AK+ + K + S +SP+Q+L+RLT+ HP Y LDY+
Sbjct: 61 FLKTFSKEEDLKFFAKILQCYANRKVVEEFKTKSHGKESPEQRLIRLTLEHPQYPLDYSF 120
Query: 439 GPKNEEWAFTGPGRISKAGKSNSMVAVDCEMVLCQDGTEAVVKVCVVDENMEVKLNELVN 618
E W T + K +SN+M+AVDCEMVLC+DGTE +V+VCVVD N++VKLNELV
Sbjct: 121 PSHEEGWMVTKIRQKFKFTRSNAMLAVDCEMVLCEDGTEGLVRVCVVDRNLQVKLNELVK 180
Query: 619 PNKAVADYRTKITGISSEDLEGVTCSLANIQKKMKKLLRNGTILVGHSLYNDLRALKLDH 798
P+KAV DYRT+ITG+S++D + T SL +IQ+ MKKLL +G +LVGHSL+NDL+ALKLDH
Sbjct: 181 PHKAVVDYRTEITGVSAKDFDETTSSLVDIQRSMKKLLSHGAVLVGHSLHNDLKALKLDH 240
Query: 799 ARVIDTSYIF---DTPDHRRPSLNDLCKTVLGYEVRKDGAPHNCLDDAQAAMKLVLAKLE 969
ARVIDT++I+ + P +RRPSLN+LCK++LGYEVR+ APHNCLDDA AAMKLVLAKLE
Sbjct: 241 ARVIDTAFIYKYENQPINRRPSLNNLCKSILGYEVRQKDAPHNCLDDASAAMKLVLAKLE 300
Query: 970 GRSESSIALAAKDVPES--AKLLIHGIPRGVRKEELLRIFP-DFTFELQ 1107
+ +I +DVPE+ AKLL+H IP V EEL RI P +FT E Q
Sbjct: 301 QGLDDAIPFVHEDVPENEMAKLLLHRIPTDVPIEELNRIIPGEFTMEHQ 349