BLASTX nr result

ID: Cimicifuga21_contig00003604 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003604
         (1323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319372.1| predicted protein [Populus trichocarpa] gi|2...   383   e-108
ref|XP_002278442.1| PREDICTED: secretory carrier-associated memb...   380   e-108
ref|XP_004134729.1| PREDICTED: secretory carrier-associated memb...   384   e-108
gb|AFK40454.1| unknown [Lotus japonicus]                              377   e-108
gb|ACF06527.1| secretory carrier membrane protein [Elaeis guinee...   374   e-107

>ref|XP_002319372.1| predicted protein [Populus trichocarpa] gi|222857748|gb|EEE95295.1|
            predicted protein [Populus trichocarpa]
          Length = 304

 Score =  383 bits (984), Expect(2) = e-108
 Identities = 190/267 (71%), Positives = 209/267 (78%)
 Frame = +2

Query: 311  NPGSVPPATNSRLSPLPPEPVDYDRGATIDIPLDSTKDIXXXXXXXXXXXXXXXXXXXXX 490
            NPGSVPPAT SRLSPLP EP  YDRGATIDIPLDS KDI                     
Sbjct: 41   NPGSVPPAT-SRLSPLPHEP--YDRGATIDIPLDSGKDIKAKEKELQAKEAELKRREQEL 97

Query: 491  XXXXDAVARAGIVLEDKNWPPFFPIIHHDIGNEIPIHLQRMQYVAFTTWLGLVVCLLWNI 670
                DA+ARAGIV+EDKNWPPFFPIIHHDIGNEIPIHLQ+MQYVAFTT LGL VCL WNI
Sbjct: 98   KRKEDAIARAGIVIEDKNWPPFFPIIHHDIGNEIPIHLQKMQYVAFTTLLGLFVCLSWNI 157

Query: 671  VAVTTAWIEGEGVTIWLLAIIYFIAGVPGGYVLWYRPLYRAMRTESALKFGWFFLTYLFH 850
            +AVTTAWI+GEG TIW LAIIYFIAGVPGGYV+WYRPLYRAMRT+SALKFGWFF  YLFH
Sbjct: 158  IAVTTAWIKGEGPTIWFLAIIYFIAGVPGGYVMWYRPLYRAMRTDSALKFGWFFFAYLFH 217

Query: 851  IAFCVYAAVAPPIIFKGKSLTGILPAIDVLSGNALVXXXXXXXXXXXVLESVMSIWVIQQ 1030
            I FC++AAVAPPI+FKGKSL GILPAID++  +ALV            +ES++SIWVIQQ
Sbjct: 218  IGFCIFAAVAPPIVFKGKSLAGILPAIDLMGNHALVGIFYFIGFGFFCVESLLSIWVIQQ 277

Query: 1031 VYMYFRGSGKAAEMRRDATRGAMRAAI 1111
            VYMYFRGSGKAAEM+R+A    M AA+
Sbjct: 278  VYMYFRGSGKAAEMKREAATRTMMAAL 304



 Score = 37.7 bits (86), Expect(2) = e-108
 Identities = 15/16 (93%), Positives = 16/16 (100%)
 Frame = +3

Query: 201 RYDSNPFDEDEVNPFA 248
           RYDSNPFDE+EVNPFA
Sbjct: 3   RYDSNPFDEEEVNPFA 18


>ref|XP_002278442.1| PREDICTED: secretory carrier-associated membrane protein 3 [Vitis
            vinifera] gi|297739263|emb|CBI28914.3| unnamed protein
            product [Vitis vinifera]
          Length = 285

 Score =  380 bits (976), Expect(2) = e-108
 Identities = 183/266 (68%), Positives = 208/266 (78%)
 Frame = +2

Query: 311  NPGSVPPATNSRLSPLPPEPVDYDRGATIDIPLDSTKDIXXXXXXXXXXXXXXXXXXXXX 490
            NPGSVPPA NSRLSPLPPEP  Y RGAT+DIPLD  KD                      
Sbjct: 20   NPGSVPPAANSRLSPLPPEPAGY-RGATVDIPLDGAKDTKAKERELQAKEAELKKREQEL 78

Query: 491  XXXXDAVARAGIVLEDKNWPPFFPIIHHDIGNEIPIHLQRMQYVAFTTWLGLVVCLLWNI 670
                DAVARAGIV+E+KNWPPFFP+IHHDI NEIPIH Q++QYVAFTT+LGLV+CL WNI
Sbjct: 79   KRREDAVARAGIVIEEKNWPPFFPLIHHDIANEIPIHQQKLQYVAFTTYLGLVLCLTWNI 138

Query: 671  VAVTTAWIEGEGVTIWLLAIIYFIAGVPGGYVLWYRPLYRAMRTESALKFGWFFLTYLFH 850
            VAVTTAWI+GEG TIW LAIIYF++GVPG YVLWYRPLYRAMRT+SALKFGWFFL YL H
Sbjct: 139  VAVTTAWIKGEGPTIWFLAIIYFLSGVPGAYVLWYRPLYRAMRTDSALKFGWFFLFYLLH 198

Query: 851  IAFCVYAAVAPPIIFKGKSLTGILPAIDVLSGNALVXXXXXXXXXXXVLESVMSIWVIQQ 1030
            IAFC++A+VAPPI+FKGKSLTGILPA+D+LS +ALV            LES++SIWV+QQ
Sbjct: 199  IAFCIFASVAPPIVFKGKSLTGILPAVDLLSKHALVGIFYLIGFGLFCLESLLSIWVVQQ 258

Query: 1031 VYMYFRGSGKAAEMRRDATRGAMRAA 1108
            VYMYFRGSGKA E++RDA RG +  A
Sbjct: 259  VYMYFRGSGKAQEIKRDAARGTVMQA 284



 Score = 40.8 bits (94), Expect(2) = e-108
 Identities = 16/19 (84%), Positives = 19/19 (100%)
 Frame = +3

Query: 192 MAGRYDSNPFDEDEVNPFA 248
           MAGRY+SNPFDE++VNPFA
Sbjct: 1   MAGRYESNPFDEEDVNPFA 19


>ref|XP_004134729.1| PREDICTED: secretory carrier-associated membrane protein 3-like
            [Cucumis sativus]
          Length = 295

 Score =  384 bits (985), Expect(2) = e-108
 Identities = 189/275 (68%), Positives = 211/275 (76%), Gaps = 8/275 (2%)
 Frame = +2

Query: 311  NPGSVPPATNSRLSPLPPEPVD--YDRGATIDIPLDST------KDIXXXXXXXXXXXXX 466
            NPGSVPPATNSRLSPLPPEPVD  Y RGAT+DIPLDS       KD+             
Sbjct: 21   NPGSVPPATNSRLSPLPPEPVDFNYGRGATVDIPLDSNSEGSNYKDLKKKEKELQAKEAD 80

Query: 467  XXXXXXXXXXXXDAVARAGIVLEDKNWPPFFPIIHHDIGNEIPIHLQRMQYVAFTTWLGL 646
                        DA  RAGIVLE+KNWPPFFPIIHHDI N+IPIHLQR+QYVAFTT LGL
Sbjct: 81   LRRREQEVKRREDAANRAGIVLEEKNWPPFFPIIHHDIANDIPIHLQRLQYVAFTTLLGL 140

Query: 647  VVCLLWNIVAVTTAWIEGEGVTIWLLAIIYFIAGVPGGYVLWYRPLYRAMRTESALKFGW 826
             +CLLWNIVAVTTAWI+GEGV IW LA+IYFIAGVPGGY LWYRPLY A R+ESA+KFGW
Sbjct: 141  TLCLLWNIVAVTTAWIKGEGVKIWFLAVIYFIAGVPGGYFLWYRPLYNASRSESAMKFGW 200

Query: 827  FFLTYLFHIAFCVYAAVAPPIIFKGKSLTGILPAIDVLSGNALVXXXXXXXXXXXVLESV 1006
            FF+ YL HI FC++AAVAPPI+F+GKSLTGILPAID++ G  LV            LESV
Sbjct: 201  FFMFYLLHIGFCIFAAVAPPIVFRGKSLTGILPAIDLIGGQVLVGIFYFIGFGLFCLESV 260

Query: 1007 MSIWVIQQVYMYFRGSGKAAEMRRDATRGAMRAAI 1111
            +SIWVIQQVYMYFRGSGKAA+M+R+A RGA+RAAI
Sbjct: 261  LSIWVIQQVYMYFRGSGKAAQMKREAARGAVRAAI 295



 Score = 37.0 bits (84), Expect(2) = e-108
 Identities = 17/20 (85%), Positives = 18/20 (90%), Gaps = 1/20 (5%)
 Frame = +3

Query: 192 MAGRYDSNPFD-EDEVNPFA 248
           MAGRYD NPFD E+EVNPFA
Sbjct: 1   MAGRYDRNPFDEEEEVNPFA 20


>gb|AFK40454.1| unknown [Lotus japonicus]
          Length = 288

 Score =  377 bits (969), Expect(2) = e-108
 Identities = 182/269 (67%), Positives = 208/269 (77%), Gaps = 2/269 (0%)
 Frame = +2

Query: 311  NPGSVPPATNSRLSPLPPEPVDYDRG--ATIDIPLDSTKDIXXXXXXXXXXXXXXXXXXX 484
            NPG VPPATNSRLSPL PEPVDY+ G  AT+DIPLD++ D+                   
Sbjct: 20   NPGRVPPATNSRLSPLKPEPVDYNYGFGATVDIPLDTSNDLKNKEKELQSKEAELKRREQ 79

Query: 485  XXXXXXDAVARAGIVLEDKNWPPFFPIIHHDIGNEIPIHLQRMQYVAFTTWLGLVVCLLW 664
                  +A ARAGIV+E+KNWPPFFPIIHHDI NEIP+HLQR+QYVAFTT LGLVVCL W
Sbjct: 80   EVRRREEAAARAGIVIEEKNWPPFFPIIHHDIANEIPVHLQRLQYVAFTTLLGLVVCLTW 139

Query: 665  NIVAVTTAWIEGEGVTIWLLAIIYFIAGVPGGYVLWYRPLYRAMRTESALKFGWFFLTYL 844
            N++AVT AWI+GEGV IW LA+IYFI+GVPG YVLWYRPLYRA R ESALKFGWFFL Y+
Sbjct: 140  NVIAVTAAWIKGEGVKIWFLAVIYFISGVPGAYVLWYRPLYRAFRNESALKFGWFFLFYM 199

Query: 845  FHIAFCVYAAVAPPIIFKGKSLTGILPAIDVLSGNALVXXXXXXXXXXXVLESVMSIWVI 1024
             HI FC+ AAVAPPI+FKGKSLTGIL AIDVL  +AL+            LE+V+SIWV+
Sbjct: 200  IHIGFCILAAVAPPIVFKGKSLTGILAAIDVLDNHALIGIFYFIGFGLFCLETVISIWVL 259

Query: 1025 QQVYMYFRGSGKAAEMRRDATRGAMRAAI 1111
            QQVYMYFRGSGKAAEM+R+A RGA+RAAI
Sbjct: 260  QQVYMYFRGSGKAAEMKREAARGALRAAI 288



 Score = 42.4 bits (98), Expect(2) = e-108
 Identities = 17/19 (89%), Positives = 19/19 (100%)
 Frame = +3

Query: 192 MAGRYDSNPFDEDEVNPFA 248
           MAGRYDSNPFDE+EVNPF+
Sbjct: 1   MAGRYDSNPFDEEEVNPFS 19


>gb|ACF06527.1| secretory carrier membrane protein [Elaeis guineensis]
          Length = 310

 Score =  374 bits (961), Expect(2) = e-107
 Identities = 183/268 (68%), Positives = 206/268 (76%), Gaps = 2/268 (0%)
 Frame = +2

Query: 314  PGSVPPATNSRLSPLPPEPVDY--DRGATIDIPLDSTKDIXXXXXXXXXXXXXXXXXXXX 487
            PGSVPPA NSRLSPLPPEP D+  DR AT+DIPLD+ KD+                    
Sbjct: 43   PGSVPPALNSRLSPLPPEPADFYNDRSATVDIPLDTAKDLKKKERELQAKEAELNKREKE 102

Query: 488  XXXXXDAVARAGIVLEDKNWPPFFPIIHHDIGNEIPIHLQRMQYVAFTTWLGLVVCLLWN 667
                 +A +RAGIV+E+KNWPPFFPIIHHDI NEIPIHLQR+QY AF + LGL  CLLWN
Sbjct: 103  LKRLEEAASRAGIVIEEKNWPPFFPIIHHDIANEIPIHLQRLQYFAFASLLGLTACLLWN 162

Query: 668  IVAVTTAWIEGEGVTIWLLAIIYFIAGVPGGYVLWYRPLYRAMRTESALKFGWFFLTYLF 847
             VAVT AWI+GEGV IW LAIIYFI+GVPG YVLWYRPLYRAMRTESALKFG FFL YL 
Sbjct: 163  FVAVTVAWIKGEGVKIWFLAIIYFISGVPGAYVLWYRPLYRAMRTESALKFGRFFLFYLL 222

Query: 848  HIAFCVYAAVAPPIIFKGKSLTGILPAIDVLSGNALVXXXXXXXXXXXVLESVMSIWVIQ 1027
            HI FC+Y+AVAPPIIFKGKSLTGILPAID++S + LV            +ES++S+WVIQ
Sbjct: 223  HIGFCIYSAVAPPIIFKGKSLTGILPAIDLISDHVLVGIFYFIGFGLFCVESLLSVWVIQ 282

Query: 1028 QVYMYFRGSGKAAEMRRDATRGAMRAAI 1111
            QVYMYFRGSGKAAEM+R+A RGAMRAAI
Sbjct: 283  QVYMYFRGSGKAAEMKREAARGAMRAAI 310



 Score = 43.5 bits (101), Expect(2) = e-107
 Identities = 18/19 (94%), Positives = 19/19 (100%)
 Frame = +3

Query: 192 MAGRYDSNPFDEDEVNPFA 248
           MAGRYDSNPFDE+EVNPFA
Sbjct: 1   MAGRYDSNPFDEEEVNPFA 19


Top