BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003602
         (987 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510359.1| cop9 complex subunit, putative [Ricinus comm...   351   e-111
ref|XP_002465697.1| hypothetical protein SORBIDRAFT_01g043970 [S...   345   e-108
ref|NP_001131365.1| uncharacterized protein LOC100192688 [Zea ma...   345   e-108
gb|EEC74688.1| hypothetical protein OsI_10387 [Oryza sativa Indi...   343   e-108
ref|XP_002320585.1| predicted protein [Populus trichocarpa] gi|2...   344   e-108

>ref|XP_002510359.1| cop9 complex subunit, putative [Ricinus communis]
           gi|223551060|gb|EEF52546.1| cop9 complex subunit,
           putative [Ricinus communis]
          Length = 397

 Score =  351 bits (900), Expect(2) = e-111
 Identities = 186/236 (78%), Positives = 200/236 (84%)
 Frame = +1

Query: 94  MESAFRSAAAITDQRQKIEQYKHILASVLGSNDITQAKRFVDHMVSDDVPLVVSRQLLQT 273
           MESAF SA+AITDQRQKIEQYKHILASV+ SNDI QAK+F+DHM+SDDVPLVVSRQLLQ+
Sbjct: 1   MESAFASASAITDQRQKIEQYKHILASVISSNDIDQAKKFIDHMLSDDVPLVVSRQLLQS 60

Query: 274 FAQELXXXXXXXXXXXXXXXXXXXXQTFAQELGTLEAEAQKEIAHYALTQIQPRVVSFEE 453
           FAQE                           LG LE + QKEIAHY L QIQPRVVSFEE
Sbjct: 61  FAQE---------------------------LGRLEPDTQKEIAHYTLAQIQPRVVSFEE 93

Query: 454 QVLIIREKLAELYESEQQWSKAAQMLSGIDLDSGIRMMDETYKLSKCVQIARLYLEDDDA 633
           QVLIIREKLAELYESEQQWSKAAQMLSGIDLDSG+R++D+T++LSKCVQIARLYLEDDDA
Sbjct: 94  QVLIIREKLAELYESEQQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDA 153

Query: 634 VNAEAFINKASFLVSNSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIEQR 801
           VNAEAFINKASFLVSNSQ EVLNLQYKVCYARILDLKRKFLEAALRYYDISQIE+R
Sbjct: 154 VNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIEKR 209



 Score = 78.6 bits (192), Expect(2) = e-111
 Identities = 39/43 (90%), Positives = 42/43 (97%)
 Frame = +3

Query: 858 QRQIGDEVIDEDALEQALTAAVTCTILAAAGPQRSRVLATLYK 986
           +RQIGDE IDE+ALEQAL+AAVTCTILAAAGPQRSRVLATLYK
Sbjct: 208 KRQIGDETIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYK 250


>ref|XP_002465697.1| hypothetical protein SORBIDRAFT_01g043970 [Sorghum bicolor]
           gi|241919551|gb|EER92695.1| hypothetical protein
           SORBIDRAFT_01g043970 [Sorghum bicolor]
          Length = 399

 Score =  345 bits (884), Expect(2) = e-108
 Identities = 185/238 (77%), Positives = 202/238 (84%), Gaps = 2/238 (0%)
 Frame = +1

Query: 94  MESAFRSAAAITDQRQKIEQYKHILASVLGSN--DITQAKRFVDHMVSDDVPLVVSRQLL 267
           M+S+  SAAAI DQRQKIEQY+HILASVL S+  DI+QAKRF+DHMVSD+VPLVVSRQLL
Sbjct: 1   MDSSLASAAAIADQRQKIEQYRHILASVLSSSPPDISQAKRFLDHMVSDEVPLVVSRQLL 60

Query: 268 QTFAQELXXXXXXXXXXXXXXXXXXXXQTFAQELGTLEAEAQKEIAHYALTQIQPRVVSF 447
           QTFAQ                           +LG LE++AQKE+AHYALTQIQPRVVSF
Sbjct: 61  QTFAQ---------------------------DLGKLESDAQKEVAHYALTQIQPRVVSF 93

Query: 448 EEQVLIIREKLAELYESEQQWSKAAQMLSGIDLDSGIRMMDETYKLSKCVQIARLYLEDD 627
           EEQV++IREKLAELYESEQQWSKAAQMLSGIDLDSGIRM+D+T KLSKCVQIARLYLEDD
Sbjct: 94  EEQVVVIREKLAELYESEQQWSKAAQMLSGIDLDSGIRMLDDTNKLSKCVQIARLYLEDD 153

Query: 628 DAVNAEAFINKASFLVSNSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIEQR 801
           DAVNAEAFINKASFLV+NS QEVLNLQYKVCYARILDLKR+FLEAALRYYDISQIEQR
Sbjct: 154 DAVNAEAFINKASFLVTNSHQEVLNLQYKVCYARILDLKRRFLEAALRYYDISQIEQR 211



 Score = 75.9 bits (185), Expect(2) = e-108
 Identities = 38/43 (88%), Positives = 41/43 (95%)
 Frame = +3

Query: 858 QRQIGDEVIDEDALEQALTAAVTCTILAAAGPQRSRVLATLYK 986
           QR+IGDE IDE+ALEQAL+AAVTCTILA AGPQRSRVLATLYK
Sbjct: 210 QRKIGDEEIDENALEQALSAAVTCTILAGAGPQRSRVLATLYK 252


>ref|NP_001131365.1| uncharacterized protein LOC100192688 [Zea mays]
           gi|194691326|gb|ACF79747.1| unknown [Zea mays]
           gi|195639514|gb|ACG39225.1| COP9 signalosome complex
           subunit 4 [Zea mays] gi|414865414|tpg|DAA43971.1| TPA:
           COP9 signalosome complex subunit 4 [Zea mays]
          Length = 399

 Score =  345 bits (884), Expect(2) = e-108
 Identities = 185/238 (77%), Positives = 202/238 (84%), Gaps = 2/238 (0%)
 Frame = +1

Query: 94  MESAFRSAAAITDQRQKIEQYKHILASVLGSN--DITQAKRFVDHMVSDDVPLVVSRQLL 267
           M+S+  SAAAI DQRQKIEQY+HILASVL S+  DI+QAKRF+DHMVSD+VPLVVSRQLL
Sbjct: 1   MDSSLASAAAIADQRQKIEQYRHILASVLSSSPPDISQAKRFLDHMVSDEVPLVVSRQLL 60

Query: 268 QTFAQELXXXXXXXXXXXXXXXXXXXXQTFAQELGTLEAEAQKEIAHYALTQIQPRVVSF 447
           QTFAQ                           +LG LE++AQKE+AHYALTQIQPRVVSF
Sbjct: 61  QTFAQ---------------------------DLGKLESDAQKEVAHYALTQIQPRVVSF 93

Query: 448 EEQVLIIREKLAELYESEQQWSKAAQMLSGIDLDSGIRMMDETYKLSKCVQIARLYLEDD 627
           EEQV++IREKLAELYESEQQWSKAAQMLSGIDLDSGIRM+D+T KLSKCVQIARLYLEDD
Sbjct: 94  EEQVVVIREKLAELYESEQQWSKAAQMLSGIDLDSGIRMLDDTNKLSKCVQIARLYLEDD 153

Query: 628 DAVNAEAFINKASFLVSNSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIEQR 801
           DAVNAEAFINKASFLV+NS QEVLNLQYKVCYARILDLKR+FLEAALRYYDISQIEQR
Sbjct: 154 DAVNAEAFINKASFLVTNSHQEVLNLQYKVCYARILDLKRRFLEAALRYYDISQIEQR 211



 Score = 75.9 bits (185), Expect(2) = e-108
 Identities = 38/43 (88%), Positives = 41/43 (95%)
 Frame = +3

Query: 858 QRQIGDEVIDEDALEQALTAAVTCTILAAAGPQRSRVLATLYK 986
           QR+IGDE IDE+ALEQAL+AAVTCTILA AGPQRSRVLATLYK
Sbjct: 210 QRKIGDEEIDENALEQALSAAVTCTILAGAGPQRSRVLATLYK 252


>gb|EEC74688.1| hypothetical protein OsI_10387 [Oryza sativa Indica Group]
          Length = 399

 Score =  343 bits (879), Expect(2) = e-108
 Identities = 184/238 (77%), Positives = 201/238 (84%), Gaps = 2/238 (0%)
 Frame = +1

Query: 94  MESAFRSAAAITDQRQKIEQYKHILASVLGSN--DITQAKRFVDHMVSDDVPLVVSRQLL 267
           M++A  SAAAI DQRQKIEQY+HIL+SVL S+  DI+QAKRF+DHMVSD+VPLVVSRQLL
Sbjct: 1   MDNALASAAAIADQRQKIEQYRHILSSVLSSSPPDISQAKRFLDHMVSDEVPLVVSRQLL 60

Query: 268 QTFAQELXXXXXXXXXXXXXXXXXXXXQTFAQELGTLEAEAQKEIAHYALTQIQPRVVSF 447
           QTFAQ                           ELG LE EAQKE+AHYALTQIQPRVVSF
Sbjct: 61  QTFAQ---------------------------ELGRLEPEAQKEVAHYALTQIQPRVVSF 93

Query: 448 EEQVLIIREKLAELYESEQQWSKAAQMLSGIDLDSGIRMMDETYKLSKCVQIARLYLEDD 627
           EEQV++IREKLAELYESEQQWSKAAQMLSGIDLDSGIRM+D+T KLSKCVQIARLYLEDD
Sbjct: 94  EEQVVVIREKLAELYESEQQWSKAAQMLSGIDLDSGIRMLDDTNKLSKCVQIARLYLEDD 153

Query: 628 DAVNAEAFINKASFLVSNSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIEQR 801
           D+VNAEAFINKASFLV+NS QE+LNLQYKVCYARILDLKR+FLEAALRYYDISQIEQR
Sbjct: 154 DSVNAEAFINKASFLVTNSHQELLNLQYKVCYARILDLKRRFLEAALRYYDISQIEQR 211



 Score = 77.4 bits (189), Expect(2) = e-108
 Identities = 39/43 (90%), Positives = 41/43 (95%)
 Frame = +3

Query: 858 QRQIGDEVIDEDALEQALTAAVTCTILAAAGPQRSRVLATLYK 986
           QRQIGDE IDE+ALEQAL+AAVTCTILA AGPQRSRVLATLYK
Sbjct: 210 QRQIGDEEIDENALEQALSAAVTCTILAGAGPQRSRVLATLYK 252


>ref|XP_002320585.1| predicted protein [Populus trichocarpa] gi|222861358|gb|EEE98900.1|
           predicted protein [Populus trichocarpa]
          Length = 397

 Score =  344 bits (882), Expect(2) = e-108
 Identities = 182/236 (77%), Positives = 196/236 (83%)
 Frame = +1

Query: 94  MESAFRSAAAITDQRQKIEQYKHILASVLGSNDITQAKRFVDHMVSDDVPLVVSRQLLQT 273
           ME  F SA+ ITDQRQKIEQYKHIL+SV+ SNDI QAK+F+DHM+SDDVPLVVSRQLLQT
Sbjct: 1   MEIVFASASTITDQRQKIEQYKHILSSVISSNDIVQAKKFIDHMLSDDVPLVVSRQLLQT 60

Query: 274 FAQELXXXXXXXXXXXXXXXXXXXXQTFAQELGTLEAEAQKEIAHYALTQIQPRVVSFEE 453
           FA E                           LG LE E QKEIAHY L QIQPRVVSFEE
Sbjct: 61  FAHE---------------------------LGRLEPETQKEIAHYTLAQIQPRVVSFEE 93

Query: 454 QVLIIREKLAELYESEQQWSKAAQMLSGIDLDSGIRMMDETYKLSKCVQIARLYLEDDDA 633
           QVLIIREKLAELYESEQQWSKAAQMLSGIDLDSG+R++D++++LSKCVQIARLYLEDDDA
Sbjct: 94  QVLIIREKLAELYESEQQWSKAAQMLSGIDLDSGMRVIDDSFRLSKCVQIARLYLEDDDA 153

Query: 634 VNAEAFINKASFLVSNSQQEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIEQR 801
           VNAEAFINKASFLVSNSQ EVLNLQYKVCYARILDLKRKFLEAALRYYDISQIE+R
Sbjct: 154 VNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIEKR 209



 Score = 75.5 bits (184), Expect(2) = e-108
 Identities = 38/43 (88%), Positives = 41/43 (95%)
 Frame = +3

Query: 858 QRQIGDEVIDEDALEQALTAAVTCTILAAAGPQRSRVLATLYK 986
           +RQI DE IDE+ALEQAL+AAVTCTILAAAGPQRSRVLATLYK
Sbjct: 208 KRQIEDETIDEEALEQALSAAVTCTILAAAGPQRSRVLATLYK 250