BLASTX nr result

ID: Cimicifuga21_contig00003601 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003601
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20322.3| unnamed protein product [Vitis vinifera]               66   3e-09
ref|XP_002282230.1| PREDICTED: pentatricopeptide repeat-containi...    66   3e-09
ref|XP_003632962.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06
emb|CAN64166.1| hypothetical protein VITISV_006333 [Vitis vinifera]    57   2e-06

>emb|CBI20322.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/45 (66%), Positives = 39/45 (86%)
 Frame = +3

Query: 6   VEEVETFVEALKAISPMDKNMYHSLIKAKLRAGKDVEELLESMKA 140
           VEEVETFV ALKA+ PMD+ MYH+ I+A +RAGK+V+ +L+SMKA
Sbjct: 439 VEEVETFVSALKAVIPMDREMYHAQIRASIRAGKEVDGILDSMKA 483


>ref|XP_002282230.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
           mitochondrial [Vitis vinifera]
          Length = 504

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/45 (66%), Positives = 39/45 (86%)
 Frame = +3

Query: 6   VEEVETFVEALKAISPMDKNMYHSLIKAKLRAGKDVEELLESMKA 140
           VEEVETFV ALKA+ PMD+ MYH+ I+A +RAGK+V+ +L+SMKA
Sbjct: 439 VEEVETFVSALKAVIPMDREMYHAQIRASIRAGKEVDGILDSMKA 483


>ref|XP_003632962.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
           mitochondrial-like [Vitis vinifera]
          Length = 506

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/46 (56%), Positives = 37/46 (80%)
 Frame = +3

Query: 3   QVEEVETFVEALKAISPMDKNMYHSLIKAKLRAGKDVEELLESMKA 140
           +VE+VE FV +L+ + PM++ MYH+LI A +RAGK+V+ LL SMKA
Sbjct: 441 RVEDVEAFVGSLRIVIPMNRRMYHTLIMANIRAGKEVDGLLASMKA 486


>emb|CAN64166.1| hypothetical protein VITISV_006333 [Vitis vinifera]
          Length = 506

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/46 (56%), Positives = 37/46 (80%)
 Frame = +3

Query: 3   QVEEVETFVEALKAISPMDKNMYHSLIKAKLRAGKDVEELLESMKA 140
           +VE+VE FV +L+ + PM++ MYH+LI A +RAGK+V+ LL SMKA
Sbjct: 441 RVEDVEAFVGSLRIVIPMNRRMYHTLIMANIRAGKEVDGLLASMKA 486


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