BLASTX nr result

ID: Cimicifuga21_contig00003593 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003593
         (1964 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66043.1| hypothetical protein [Beta vulgaris subsp. vulga...    60   2e-06

>emb|CCA66043.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 438

 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 59/250 (23%), Positives = 102/250 (40%), Gaps = 2/250 (0%)
 Frame = -1

Query: 1484 VLIGKPFSPTHKSVDEILLSLRTQMGY*HELIISPAEEGFFFLRFKREDLMKQILREGPW 1305
            +LIGK  +    ++D    ++ T     H L+I   +   F  +F     M +++   PW
Sbjct: 38   LLIGKLLTERSYNIDAFKRTITTVWAPQHGLVIRTLKPNLFAFQFYHWRDMSKVMDGRPW 97

Query: 1304 QTFGQCFPLQRYNSSIPLQEIHLVTFDIWFTFLNLPRNRNTIDHITFLLREFLLILDIEP 1125
                    L+  +      ++ L     W    NLP N  + D +  L+     ILDIE 
Sbjct: 98   CFDNMLVLLKEADGDEQPDQVCLNHSPFWIRLKNLPFNMRSNDVVKALIGNLGEILDIE- 156

Query: 1124 KPGEPIPACGYKVRTRLWLD--KPIPQGIKIDDGSTRLIEVVFNYINLPRQFCSSCLLLG 951
               E +   G   R ++ LD  KP+ +  K+ D S + ++V F Y  LP  FC +C ++G
Sbjct: 157  ---EDVLGIGRYRRVKVLLDVSKPLRRYRKLRDKSGKDLQVDFAYERLP-FFCLACGIMG 212

Query: 950  HKWLTCKERIAEEENKLLWAGDKAGSTRTQAETSNKHANLLIEAGESQAIQDITPTVYQG 771
            H    C+  + E++ + L       +T  +         L  +  +       +  V QG
Sbjct: 213  HAEKDCQFVLDEDKCEKLGWNLSLKATPRKGRNKEMEEELKFKHCKKNLFDKPSELVKQG 272

Query: 770  DERIQPQVLS 741
               I+  V+S
Sbjct: 273  SLLIKEHVIS 282


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