BLASTX nr result
ID: Cimicifuga21_contig00003588
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00003588
(735 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001054191.1| Os04g0667800 [Oryza sativa Japonica Group] g... 303 2e-80
ref|XP_003580772.1| PREDICTED: ubiquitin-conjugating enzyme E2 2... 302 5e-80
gb|AAD51109.1|AF176040_1 ubiquitin-conjugating enzyme UBC2 [Mese... 301 7e-80
ref|NP_564828.1| ubiquitin-conjugating enzyme E2 28 [Arabidopsis... 301 9e-80
ref|XP_002274367.1| PREDICTED: ubiquitin-conjugating enzyme E2-1... 301 9e-80
>ref|NP_001054191.1| Os04g0667800 [Oryza sativa Japonica Group]
gi|226492411|ref|NP_001148222.1| ubiquitin-conjugating
enzyme E2-17 kDa [Zea mays]
gi|350536019|ref|NP_001232817.1| ubiquitin-conjugating
enzyme E2-17 kDa [Zea mays]
gi|242077578|ref|XP_002448725.1| hypothetical protein
SORBIDRAFT_06g032120 [Sorghum bicolor]
gi|32488376|emb|CAE02801.1| OSJNBa0043A12.6 [Oryza
sativa Japonica Group] gi|90399233|emb|CAH68307.1|
B0811B10.8 [Oryza sativa Indica Group]
gi|113565762|dbj|BAF16105.1| Os04g0667800 [Oryza sativa
Japonica Group] gi|116308863|emb|CAH66000.1| H1005F08.29
[Oryza sativa Indica Group] gi|125550147|gb|EAY95969.1|
hypothetical protein OsI_17840 [Oryza sativa Indica
Group] gi|195616786|gb|ACG30223.1| ubiquitin-conjugating
enzyme E2-17 kDa [Zea mays] gi|195617724|gb|ACG30692.1|
ubiquitin-conjugating enzyme E2-17 kDa [Zea mays]
gi|195637808|gb|ACG38372.1| ubiquitin-conjugating enzyme
E2-17 kDa [Zea mays] gi|215767514|dbj|BAG99742.1|
unnamed protein product [Oryza sativa Japonica Group]
gi|238012450|gb|ACR37260.1| unknown [Zea mays]
gi|241939908|gb|EES13053.1| hypothetical protein
SORBIDRAFT_06g032120 [Sorghum bicolor]
gi|359359047|gb|AEV40954.1| putative
ubiquitin-conjugating enzyme [Oryza punctata]
gi|359359098|gb|AEV41004.1| putative
ubiquitin-conjugating enzyme [Oryza minuta]
gi|359359147|gb|AEV41052.1| putative
ubiquitin-conjugating enzyme [Oryza minuta]
gi|359359193|gb|AEV41097.1| putative
ubiquitin-conjugating enzyme [Oryza officinalis]
gi|414584895|tpg|DAA35466.1| TPA: putative
ubiquitin-conjugating enzyme family isoform 1 [Zea mays]
gi|414584896|tpg|DAA35467.1| TPA: putative
ubiquitin-conjugating enzyme family isoform 2 [Zea mays]
Length = 148
Score = 303 bits (776), Expect = 2e-80
Identities = 142/148 (95%), Positives = 145/148 (97%)
Frame = +3
Query: 150 MASKRILKELKDLQKDPPVSCSAGPVGEDMFHWQATIMGPSDSPFSGGVFLVTIHFPPDY 329
MASKRILKELKDLQKDPP SCSAGPVGEDMFHWQATIMGPSDSPF+GGVFLV IHFPPDY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPSDSPFAGGVFLVNIHFPPDY 60
Query: 330 PFKPPKVSFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 509
PFKPPKVSFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61 PFKPPKVSFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 510 PEIAHMYKTDKVKYETTARSWTQKYAMG 593
PEIAHMYKTD+ KYE+TARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 148
>ref|XP_003580772.1| PREDICTED: ubiquitin-conjugating enzyme E2 28-like [Brachypodium
distachyon] gi|52548244|gb|AAU82109.1|
ubiquitin-conjugating enzyme [Triticum aestivum]
Length = 148
Score = 302 bits (773), Expect = 5e-80
Identities = 141/148 (95%), Positives = 145/148 (97%)
Frame = +3
Query: 150 MASKRILKELKDLQKDPPVSCSAGPVGEDMFHWQATIMGPSDSPFSGGVFLVTIHFPPDY 329
MASKRILKELKDLQKDPP SCSAGPVGEDMFHWQATIMGPSDSPF+GG+FLV IHFPPDY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPSDSPFTGGLFLVNIHFPPDY 60
Query: 330 PFKPPKVSFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 509
PFKPPKVSFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61 PFKPPKVSFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 510 PEIAHMYKTDKVKYETTARSWTQKYAMG 593
PEIAHMYKTD+ KYE+TARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 148
>gb|AAD51109.1|AF176040_1 ubiquitin-conjugating enzyme UBC2 [Mesembryanthemum crystallinum]
Length = 148
Score = 301 bits (772), Expect = 7e-80
Identities = 141/148 (95%), Positives = 146/148 (98%)
Frame = +3
Query: 150 MASKRILKELKDLQKDPPVSCSAGPVGEDMFHWQATIMGPSDSPFSGGVFLVTIHFPPDY 329
MASKRILKELKDLQKDPP SCSAGPVGEDMFHWQATIMGPSDSP++GG+FLVTIHFPPDY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPSDSPYAGGLFLVTIHFPPDY 60
Query: 330 PFKPPKVSFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 509
PFKPPKV+FRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 510 PEIAHMYKTDKVKYETTARSWTQKYAMG 593
PEIAHMYKTDK KYE+TARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDKGKYESTARSWTQKYAMG 148
>ref|NP_564828.1| ubiquitin-conjugating enzyme E2 28 [Arabidopsis thaliana]
gi|79320672|ref|NP_001031228.1| ubiquitin-conjugating
enzyme E2 28 [Arabidopsis thaliana]
gi|297840061|ref|XP_002887912.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
gi|75332178|sp|Q94F47.1|UBC28_ARATH RecName:
Full=Ubiquitin-conjugating enzyme E2 28; AltName:
Full=Ubiquitin carrier protein 28
gi|14326529|gb|AAK60309.1|AF385718_1 At1g64230/F22C12_17
[Arabidopsis thaliana]
gi|20136192|gb|AAM11574.1|AF480945_1 ubiquitin
conjugating enzyme UBC9A [Arabidopsis thaliana]
gi|22137310|gb|AAM91500.1| At1g64230/F22C12_17
[Arabidopsis thaliana] gi|66354464|gb|AAY44867.1|
ubiquitinating enzyme [Arabidopsis thaliana]
gi|297333753|gb|EFH64171.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
gi|332196091|gb|AEE34212.1| ubiquitin-conjugating enzyme
E2 28 [Arabidopsis thaliana] gi|332196092|gb|AEE34213.1|
ubiquitin-conjugating enzyme E2 28 [Arabidopsis
thaliana]
Length = 148
Score = 301 bits (771), Expect = 9e-80
Identities = 140/148 (94%), Positives = 145/148 (97%)
Frame = +3
Query: 150 MASKRILKELKDLQKDPPVSCSAGPVGEDMFHWQATIMGPSDSPFSGGVFLVTIHFPPDY 329
MASKRILKELKDLQKDPP SCSAGPV EDMFHWQATIMGPSDSP+SGGVFLVTIHFPPDY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60
Query: 330 PFKPPKVSFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 509
PFKPPKV+FRTKVFHPN+NSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61 PFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 510 PEIAHMYKTDKVKYETTARSWTQKYAMG 593
PEIAHMYKTD+ KYE+TARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 148
>ref|XP_002274367.1| PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa isoform 2 [Vitis
vinifera] gi|225462033|ref|XP_002274335.1| PREDICTED:
ubiquitin-conjugating enzyme E2-17 kDa isoform 1 [Vitis
vinifera] gi|359494225|ref|XP_003634740.1| PREDICTED:
ubiquitin-conjugating enzyme E2-17 kDa [Vitis vinifera]
gi|147771931|emb|CAN77946.1| hypothetical protein
VITISV_029275 [Vitis vinifera]
gi|296089984|emb|CBI39803.3| unnamed protein product
[Vitis vinifera]
Length = 148
Score = 301 bits (771), Expect = 9e-80
Identities = 141/148 (95%), Positives = 145/148 (97%)
Frame = +3
Query: 150 MASKRILKELKDLQKDPPVSCSAGPVGEDMFHWQATIMGPSDSPFSGGVFLVTIHFPPDY 329
MASKRI KELKDLQKDPP SCSAGPVG+DMFHWQATIMGPSDSPF+GGVFLV+IHFPPDY
Sbjct: 1 MASKRINKELKDLQKDPPTSCSAGPVGDDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDY 60
Query: 330 PFKPPKVSFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 509
PFKPPKVSFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61 PFKPPKVSFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 510 PEIAHMYKTDKVKYETTARSWTQKYAMG 593
PEIAHMYKTD+ KYETTARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYETTARSWTQKYAMG 148