BLASTX nr result

ID: Cimicifuga21_contig00003582 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003582
         (220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241171.1| uncharacterized protein LOC100785835 [Glycin...   123   2e-26
ref|XP_002887880.1| hypothetical protein ARALYDRAFT_474895 [Arab...   122   3e-26
ref|NP_176633.1| 26S proteasome non-ATPase regulatory subunit RP...   122   4e-26
gb|AAP86674.1| 26S proteasome subunit RPN12 [Arabidopsis thaliana]    122   4e-26
gb|ACG40420.1| 26S proteasome non-ATPase regulatory subunit 8 [Z...   121   7e-26

>ref|NP_001241171.1| uncharacterized protein LOC100785835 [Glycine max]
           gi|255634606|gb|ACU17665.1| unknown [Glycine max]
          Length = 267

 Score =  123 bits (308), Expect = 2e-26
 Identities = 58/72 (80%), Positives = 63/72 (87%)
 Frame = -3

Query: 218 DEIAGCGEKAYDYVSTSDAKKMLMFSSDKELSTYITEERPDWEIKNGLVFFQKVKESAPC 39
           DEIAGC EKAYDY+S  DAK+ML+FSSD+EL  YI EE P+WEIKNG VFFQK KESAPC
Sbjct: 185 DEIAGCSEKAYDYLSIKDAKQMLLFSSDQELLEYIKEEHPEWEIKNGSVFFQKAKESAPC 244

Query: 38  KEIPSLQLINQT 3
           KEIPSLQLINQT
Sbjct: 245 KEIPSLQLINQT 256


>ref|XP_002887880.1| hypothetical protein ARALYDRAFT_474895 [Arabidopsis lyrata subsp.
           lyrata] gi|297333721|gb|EFH64139.1| hypothetical protein
           ARALYDRAFT_474895 [Arabidopsis lyrata subsp. lyrata]
          Length = 267

 Score =  122 bits (306), Expect = 3e-26
 Identities = 56/72 (77%), Positives = 63/72 (87%)
 Frame = -3

Query: 218 DEIAGCGEKAYDYVSTSDAKKMLMFSSDKELSTYITEERPDWEIKNGLVFFQKVKESAPC 39
           DEIAGC EKAYDYVS SDA++ML+FSSD+EL TY+ EE PDWE+K G V FQK KE+APC
Sbjct: 185 DEIAGCSEKAYDYVSISDARQMLLFSSDQELLTYVKEEHPDWEVKEGFVVFQKAKETAPC 244

Query: 38  KEIPSLQLINQT 3
           KEIPSLQLINQT
Sbjct: 245 KEIPSLQLINQT 256


>ref|NP_176633.1| 26S proteasome non-ATPase regulatory subunit RPN12A [Arabidopsis
           thaliana] gi|75205191|sp|Q9SGW3.1|RP12A_ARATH RecName:
           Full=26S proteasome non-ATPase regulatory subunit
           RPN12A; AltName: Full=26S proteasome regulatory subunit
           RPN12A; AltName: Full=Regulatory particle non-ATPase 12a
           gi|6633812|gb|AAF19671.1|AC009519_5 F1N19.9 [Arabidopsis
           thaliana] gi|15294148|gb|AAK95251.1|AF410265_1
           At1g64520/F1N19_10 [Arabidopsis thaliana]
           gi|14532466|gb|AAK63961.1| At1g64520/F1N19_10
           [Arabidopsis thaliana] gi|23505935|gb|AAN28827.1|
           At1g64520/F1N19_10 [Arabidopsis thaliana]
           gi|32700046|gb|AAP86673.1| 26S proteasome subunit RPN12
           [Arabidopsis thaliana] gi|332196128|gb|AEE34249.1| 26S
           proteasome non-ATPase regulatory subunit RPN12A
           [Arabidopsis thaliana]
          Length = 267

 Score =  122 bits (305), Expect = 4e-26
 Identities = 55/72 (76%), Positives = 64/72 (88%)
 Frame = -3

Query: 218 DEIAGCGEKAYDYVSTSDAKKMLMFSSDKELSTYITEERPDWEIKNGLVFFQKVKESAPC 39
           DEIAGC EKAYDYVS SDA++ML+FSSD+EL TY+T+E P+WE+K G V FQK KE+APC
Sbjct: 185 DEIAGCSEKAYDYVSISDARQMLLFSSDQELLTYVTDEHPEWEVKEGFVVFQKAKETAPC 244

Query: 38  KEIPSLQLINQT 3
           KEIPSLQLINQT
Sbjct: 245 KEIPSLQLINQT 256


>gb|AAP86674.1| 26S proteasome subunit RPN12 [Arabidopsis thaliana]
          Length = 267

 Score =  122 bits (305), Expect = 4e-26
 Identities = 55/72 (76%), Positives = 64/72 (88%)
 Frame = -3

Query: 218 DEIAGCGEKAYDYVSTSDAKKMLMFSSDKELSTYITEERPDWEIKNGLVFFQKVKESAPC 39
           DEIAGC EKAYDYVS SDA++ML+FSSD+EL TY+T+E P+WE+K G V FQK KE+APC
Sbjct: 185 DEIAGCSEKAYDYVSISDARQMLLFSSDQELLTYVTDEHPEWEVKEGFVVFQKAKETAPC 244

Query: 38  KEIPSLQLINQT 3
           KEIPSLQLINQT
Sbjct: 245 KEIPSLQLINQT 256


>gb|ACG40420.1| 26S proteasome non-ATPase regulatory subunit 8 [Zea mays]
          Length = 267

 Score =  121 bits (303), Expect = 7e-26
 Identities = 57/72 (79%), Positives = 62/72 (86%)
 Frame = -3

Query: 218 DEIAGCGEKAYDYVSTSDAKKMLMFSSDKELSTYITEERPDWEIKNGLVFFQKVKESAPC 39
           DEIAGC EK YD +S SDAK+MLMFSSD++L  YITEE P+WEIKNG VFFQK KES PC
Sbjct: 185 DEIAGCSEKGYDSLSVSDAKQMLMFSSDQDLHEYITEEHPEWEIKNGAVFFQKAKESQPC 244

Query: 38  KEIPSLQLINQT 3
           KEIPSLQLINQT
Sbjct: 245 KEIPSLQLINQT 256


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