BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003572
         (1947 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281045.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A...   303   1e-79
ref|XP_002314719.1| predicted protein [Populus trichocarpa] gi|2...   301   3e-79
ref|XP_002517194.1| protein binding protein, putative [Ricinus c...   285   3e-74
ref|XP_002312516.1| predicted protein [Populus trichocarpa] gi|2...   275   2e-71
gb|ABR18468.1| unknown [Picea sitchensis]                             262   2e-67

>ref|XP_002281045.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A [Vitis vinifera]
            gi|297737001|emb|CBI26202.3| unnamed protein product
            [Vitis vinifera]
          Length = 391

 Score =  303 bits (776), Expect = 1e-79
 Identities = 178/367 (48%), Positives = 233/367 (63%), Gaps = 1/367 (0%)
 Frame = -2

Query: 1766 DDACSICLEPFTSDDPANVTNCKHEYHLQCILEWSQRSKECPICWQLLVLKDSASQELLA 1587
            +D+CSICLEPF++DDPA +TNC+HEYHLQCILEWSQRSKECPICWQ LVL+D  SQELLA
Sbjct: 26   EDSCSICLEPFSTDDPATITNCRHEYHLQCILEWSQRSKECPICWQFLVLQDPTSQELLA 85

Query: 1586 AVEIEXXXXXXXXXXXSPVFARSPPEYFDFD-PVSYTVESDFDEHILQHLTAAALGXXXX 1410
            AVE E              F       F +D   SY+ +SD DEHI+QH+ AAA G    
Sbjct: 86   AVEGERSPRSRNSSPTESTFLHHFQGDFGYDHDASYSDDSDLDEHIMQHVVAAASGAPYV 145

Query: 1409 XXXXXXXXXSGLDPSQFLVFSASSNDSNLQQAYTTMPVESQSAGHPTSPESDSERIIEST 1230
                      GL PS+ LVF  + +  ++Q   T  P E Q++G  +S ES+S    + +
Sbjct: 146  HRRERQRSS-GLGPSESLVFPPT-DVPDVQTINTPSPEEYQNSGSVSS-ESNSPAHSDQS 202

Query: 1229 DRHHEPTPHVLNSHVNTVASVTDSHQSPLRPRVLASQTXXXXXXXXXXSELLSFSETIKS 1050
              + +P    + S VN V+S   +     +PRV+  Q           S+LLSFS++IKS
Sbjct: 203  AINAQPLSSGVPSVVNMVSSTAANRDGLAKPRVIFDQPLPSSPRRPSPSDLLSFSDSIKS 262

Query: 1049 KFSAASARYKESITKSTRGLKDKLLARNNTVKELSKEVQREVTAGIAGVARMMERLDPTS 870
            + SAASARYKESI+K TRG K+KLL+RNN+VKELSK VQRE++AGIA V RM+ERLDP  
Sbjct: 263  RLSAASARYKESISKGTRGFKEKLLSRNNSVKELSKGVQREMSAGIASVTRMIERLDPIL 322

Query: 869  KNSGSLSPVSSGTEGTSNVSYNGKAIQENLMTPSPDELHLETGHGTSSNSPIYIPGSLSS 690
            K +G+ +P SS T GTSNVS+ GK +QEN++TPS +      G  ++ +SP   P +  +
Sbjct: 323  KRTGASNPDSSFTGGTSNVSHKGKGVQENVITPSGN-----NGEISNDSSPDASPLASVT 377

Query: 689  IPGRMEV 669
            I  R+EV
Sbjct: 378  ISDRVEV 384


>ref|XP_002314719.1| predicted protein [Populus trichocarpa] gi|222863759|gb|EEF00890.1|
            predicted protein [Populus trichocarpa]
          Length = 418

 Score =  301 bits (772), Expect = 3e-79
 Identities = 184/406 (45%), Positives = 249/406 (61%), Gaps = 16/406 (3%)
 Frame = -2

Query: 1823 SVTAIAASSGTDQHAVCED---DDACSICLEPFTSDDPANVTNCKHEYHLQCILEWSQRS 1653
            +  A ++SS +   A  +D   DD+CSICL+PFT+ DPA VT C HEYHLQCILEWSQRS
Sbjct: 20   AAAASSSSSSSSLGAGVDDAFEDDSCSICLDPFTAQDPATVTCCNHEYHLQCILEWSQRS 79

Query: 1652 KECPICWQLLVLKDSASQELLAAVEIEXXXXXXXXXXXSPVFARSPPEYFDFDPVSYTVE 1473
            KECPICWQLLVLKD ASQELLAAVE E           S +      +Y D +  SY+ +
Sbjct: 80   KECPICWQLLVLKDHASQELLAAVETERLLRSRNSTPASMIVPHLDDDY-DIEQDSYSDD 138

Query: 1472 SDFDEHILQHLTAAALGXXXXXXXXXXXXXSGLDPSQFLVFSASSNDSNLQQAYTTMPVE 1293
            SDFDEHI+QHL AAA               +GL PSQ + F++  + + +QQ  T+ P E
Sbjct: 139  SDFDEHIMQHLAAAASSRAHHVHERERQRSNGLGPSQVIAFTSPEHVATVQQTCTS-PEE 197

Query: 1292 SQSAGHPTSPESDSERIIESTDRHHEPTPHVLNSHVNTVASVT--DSHQ-------SPLR 1140
             Q+  H +S       +I S      PTP  L+ +V  ++SVT  D +Q       SP +
Sbjct: 198  GQTLIHGSS-------VINS------PTPDTLSVNVQNLSSVTPPDVNQVSTTAVNSPFK 244

Query: 1139 PRVLASQTXXXXXXXXXXSELLSFSETIKSKFSAASARYKESITKSTRGLKDKLLARNNT 960
            PR+L  Q           SE+LS S++IKSK+ AASARYK+S++KSTRG+K+KL+ARNN+
Sbjct: 245  PRILFRQPPTDTPQEQGSSEVLSLSDSIKSKWFAASARYKDSLSKSTRGIKEKLVARNNS 304

Query: 959  VKELSKEVQREVTAGIAGVARMMERLDPTSKNSGSLSPVSSGTEGTSNVSYNGKAIQENL 780
            VKELSKEVQRE++AGIAGVARM+ERLD T+K +G     S  T  TSN S+ GK +++N+
Sbjct: 305  VKELSKEVQREMSAGIAGVARMIERLDLTTKRTGPSMSDSGFTGATSNFSWKGKGVEQNI 364

Query: 779  ----MTPSPDELHLETGHGTSSNSPIYIPGSLSSIPGRMEVAQQDV 654
                +  + +E+  +T  G SS++         ++  R+E++   V
Sbjct: 365  IAQALAKTSEEIDRDTSLGASSHAS-------GTVQARVEISHVQV 403


>ref|XP_002517194.1| protein binding protein, putative [Ricinus communis]
            gi|223543829|gb|EEF45357.1| protein binding protein,
            putative [Ricinus communis]
          Length = 414

 Score =  285 bits (729), Expect = 3e-74
 Identities = 182/402 (45%), Positives = 239/402 (59%), Gaps = 6/402 (1%)
 Frame = -2

Query: 1841 SSSLKYSVTAIAASSGTDQHAVCED--DDACSICLEPFTSDDPANVTNCKHEYHLQCILE 1668
            S+S    V A A  +G    A+  D  +D CSICLEPFTS +P+ VT+CKHEYHLQCILE
Sbjct: 24   SASASAVVVADADGAGGSSGAILVDSFEDCCSICLEPFTSQNPSTVTSCKHEYHLQCILE 83

Query: 1667 WSQRSKECPICWQLLVLKDSASQELLAAVEIEXXXXXXXXXXXSPVFARSPPEYF----D 1500
            WSQRSKECPICWQLLVL++ A QELLAAVE E            P  A S P  F    D
Sbjct: 84   WSQRSKECPICWQLLVLQEPACQELLAAVETERRLRSRNT----PSAAFSNPTRFHEDID 139

Query: 1499 FDPVSYTVESDFDEHILQHLTAAALGXXXXXXXXXXXXXSGLDPSQFLVFSASSNDSNLQ 1320
             +  SY+ +SDFDE I+QHL A A               SG  PS+ L+F + +N+ + Q
Sbjct: 140  VEQDSYSDDSDFDERIMQHLAAVA-SRARYICRRERQRSSGQGPSRALIFPSPTNEPSAQ 198

Query: 1319 QAYTTMPVESQSAGHPTSPESDSERIIESTDRHHEPTPHVLNSHVNTVASVTDSHQSPLR 1140
            Q +T+  VE Q   + +S  + +  ++ES               V+T  S  D    P  
Sbjct: 199  QTHTSA-VEGQDVYYGSSRGNSATSLLESQSL----------PSVDTAVS-KDVSSKPRP 246

Query: 1139 PRVLASQTXXXXXXXXXXSELLSFSETIKSKFSAASARYKESITKSTRGLKDKLLARNNT 960
            P  +A QT           E LSFSE++KSK+ AAS+RYKESI+KST+G+K+KLLARNN+
Sbjct: 247  PSTVAPQTSS---------EGLSFSESMKSKWVAASSRYKESISKSTQGIKEKLLARNNS 297

Query: 959  VKELSKEVQREVTAGIAGVARMMERLDPTSKNSGSLSPVSSGTEGTSNVSYNGKAIQENL 780
            VKELS+ VQRE++AGIAGVARM ERLD T K +G+ SPVS   EGTS +S  GK +QEN 
Sbjct: 298  VKELSRGVQREMSAGIAGVARMFERLDLTPKRTGASSPVSGCREGTSELSLKGKGMQENT 357

Query: 779  MTPSPDELHLETGHGTSSNSPIYIPGSLSSIPGRMEVAQQDV 654
            +  + ++   E     S + P+++     ++ GR+EV  + V
Sbjct: 358  ILQALNKKSEEVPCAASMDVPLHVS---YNVQGRVEVHHEQV 396


>ref|XP_002312516.1| predicted protein [Populus trichocarpa] gi|222852336|gb|EEE89883.1|
            predicted protein [Populus trichocarpa]
          Length = 301

 Score =  275 bits (704), Expect = 2e-71
 Identities = 163/328 (49%), Positives = 202/328 (61%)
 Frame = -2

Query: 1766 DDACSICLEPFTSDDPANVTNCKHEYHLQCILEWSQRSKECPICWQLLVLKDSASQELLA 1587
            DDACSICL+PFT  DPA  T CKHEYHLQCI+EWSQRSKECPICWQLLVLKD ASQELLA
Sbjct: 1    DDACSICLDPFTPQDPATDTCCKHEYHLQCIVEWSQRSKECPICWQLLVLKDPASQELLA 60

Query: 1586 AVEIEXXXXXXXXXXXSPVFARSPPEYFDFDPVSYTVESDFDEHILQHLTAAALGXXXXX 1407
            AVE E           S +      +Y D +  SY+ +SDFD+H++QHL+A+A       
Sbjct: 61   AVETERLFRPRNSNPASMIVHHLDEDY-DVEQDSYSDDSDFDDHVMQHLSASAASRARYV 119

Query: 1406 XXXXXXXXSGLDPSQFLVFSASSNDSNLQQAYTTMPVESQSAGHPTSPESDSERIIESTD 1227
                    +GL PSQ LVF++  + S +QQ  T+ P E Q   + +S             
Sbjct: 120  CKRERHRSTGLGPSQVLVFTSPEHVSTVQQTCTS-PEEGQILSYGSS------------- 165

Query: 1226 RHHEPTPHVLNSHVNTVASVTDSHQSPLRPRVLASQTXXXXXXXXXXSELLSFSETIKSK 1047
                    V+NS      SV   + S + P V               S+L S SE+IKSK
Sbjct: 166  --------VINSSTPGTPSVKIQNLSSVAPPV----PPIDPPQGQGSSDLSSLSESIKSK 213

Query: 1046 FSAASARYKESITKSTRGLKDKLLARNNTVKELSKEVQREVTAGIAGVARMMERLDPTSK 867
            + AASARYKES++K TRG+K+KLLARNN+VKELSKEVQRE++AGIAGVARM+ERLD TSK
Sbjct: 214  WFAASARYKESLSKGTRGMKEKLLARNNSVKELSKEVQREMSAGIAGVARMIERLDLTSK 273

Query: 866  NSGSLSPVSSGTEGTSNVSYNGKAIQEN 783
             +G     S  T GTSN S+ GK +++N
Sbjct: 274  RAGPSMSDSDFTRGTSNFSWKGKGVEQN 301


>gb|ABR18468.1| unknown [Picea sitchensis]
          Length = 423

 Score =  262 bits (670), Expect = 2e-67
 Identities = 163/361 (45%), Positives = 208/361 (57%), Gaps = 14/361 (3%)
 Frame = -2

Query: 1766 DDACSICLEPFTSDDPANVTNCKHEYHLQCILEWSQRSKECPICWQLLVLKDSASQELLA 1587
            DDACSICLEPFT +DPA VT+CKHEYHLQCILEWSQRSKECP+C ++L+LKD ASQELLA
Sbjct: 27   DDACSICLEPFTDNDPATVTSCKHEYHLQCILEWSQRSKECPMCLRILILKDPASQELLA 86

Query: 1586 AVEIEXXXXXXXXXXXSPVFARSPPEYFDFDPV-SYTVESDFDEHILQHLTAAALG--XX 1416
            AVE E           +P+FAR+  +  +F  V +YT +SDF+E I+QHL AAA+G    
Sbjct: 87   AVEQE-RSFRLSRSPNTPIFARNSVDEIEFHHVPAYTDDSDFEERIMQHLAAAAMGRAHH 145

Query: 1415 XXXXXXXXXXXSGLDPSQFLVFSASSNDSNLQQAYTTMPVESQSAGHPTSPESDSERIIE 1236
                       SG    QFLVFS   N   +    +   +E+Q    PT    DS     
Sbjct: 146  FSRRENLRHRSSGQGHPQFLVFSTHPNAPPI----SPNNIEAQDGNIPTFTSLDSTTPAM 201

Query: 1235 STDRHHE-------PTPHVLNSHVNTVASVT----DSHQSPLRPRVLASQTXXXXXXXXX 1089
            +     +         P  +NS  N    +     D+   P  PR  A Q          
Sbjct: 202  TATSEEQLQQGPLPSPPGQMNSRANRNTGIAVQGLDNRSEPFTPRNNAGQQSPENQQRSR 261

Query: 1088 XSELLSFSETIKSKFSAASARYKESITKSTRGLKDKLLARNNTVKELSKEVQREVTAGIA 909
             S+  SFSE+ KS+F+A S RYKESI++STRG K+K  ARNN V EL +EVQREV+AGIA
Sbjct: 262  PSDFQSFSESFKSRFNAVSTRYKESISRSTRGFKEKFFARNNAVTELGREVQREVSAGIA 321

Query: 908  GVARMMERLDPTSKNSGSLSPVSSGTEGTSNVSYNGKAIQENLMTPSPDELHLETGHGTS 729
            GVAR+MERLDP+SKN+G  +  S   EG+S      +A++   + P  D  +  +  GTS
Sbjct: 322  GVARIMERLDPSSKNNG--ASASDNMEGSSAGMPVRQAVEGRQVFPCSDSNNGSSSCGTS 379

Query: 728  S 726
            S
Sbjct: 380  S 380