BLASTX nr result

ID: Cimicifuga21_contig00003558 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003558
         (1636 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521512.1| PREDICTED: uncharacterized protein At3g58460...   533   e-149
ref|XP_002267146.2| PREDICTED: uncharacterized protein At3g58460...   530   e-148
ref|XP_003553633.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   526   e-147
ref|XP_002531598.1| Rhomboid protein, putative [Ricinus communis...   524   e-146
ref|XP_002309277.1| predicted protein [Populus trichocarpa] gi|2...   523   e-146

>ref|XP_003521512.1| PREDICTED: uncharacterized protein At3g58460-like [Glycine max]
          Length = 414

 Score =  533 bits (1373), Expect = e-149
 Identities = 270/414 (65%), Positives = 328/414 (79%), Gaps = 3/414 (0%)
 Frame = -2

Query: 1596 KRKSKMRPNIVSEAGLPTRLSQWWEGVPFLTSCIVIVCGAIYLVCLFVGYDSFAEICFLP 1417
            +R   MRPNIVSEAG PTR+SQWWE +PFLTS +V+VCG IYL+CL VGYDSF E+CFLP
Sbjct: 2    RRARNMRPNIVSEAGFPTRMSQWWESIPFLTSAVVVVCGVIYLICLLVGYDSFYEVCFLP 61

Query: 1416 SAVISKFQVYRIFTSILFHGSLLHVLFNMLALVPMGSELERIMGSVRLLHVIMILATSNX 1237
            SAV+S+FQVYRI+TSILFHGSLLHV+FNM+ALVP+GSELERIMGSVRLL+VI+++ATSN 
Sbjct: 62   SAVVSRFQVYRIYTSILFHGSLLHVVFNMMALVPLGSELERIMGSVRLLYVIILVATSNA 121

Query: 1236 XXXXXXXXXXXHTPFWSHEYIMNECAIGFSGVLFSMIVIETSLSGVQYRSVFGLFNVPAK 1057
                       H P  +++Y+MNECAIGFSGVLFSMIVIETSLSGVQ RSVFGLFNVPAK
Sbjct: 122  IFHVLIALLVAHNPLLTYDYLMNECAIGFSGVLFSMIVIETSLSGVQSRSVFGLFNVPAK 181

Query: 1056 WYAWILLIVFQLLMSNVSLLGHLCGILSGFAYTYGLYNYLLPGSSFFSTIDSSTLLSTCV 877
            WYA+ LL+VFQLLM NVSLLGHLCGILSGFAYTYGL+N+L+PG+SF+S+I+SS+  S+CV
Sbjct: 182  WYAFFLLVVFQLLMQNVSLLGHLCGILSGFAYTYGLFNFLIPGTSFYSSIESSSWFSSCV 241

Query: 876  RRPKFILCTGGNLSGYIXXXXXXXXXXXTLIPGNIWRNVSSWMPGRETAAAQPTQDSRFP 697
            RRPKFI+CTGGN SGYI            L+ GN+WRN+SS+MP RE  +AQ T+DSRFP
Sbjct: 242  RRPKFIVCTGGNPSGYIPTHTSQNSTTSGLLSGNVWRNLSSFMPQRE-VSAQSTEDSRFP 300

Query: 696  GRGRTXXXXXXXXXXXXXSDSNLQARLLDNDDPNHLLETTISSTGPQIPDGRRSSVDSLA 517
            GRGRT             SDSNLQARLL++  PN  L+++  S   ++ +GR  SVD++A
Sbjct: 301  GRGRTLGAVQGQTASHLHSDSNLQARLLEDSSPNSPLDSSTPSNPQRLSEGRH-SVDNVA 359

Query: 516  AVPA---HHQGSDNFDEELERLVAMGFEKTQVEVALTAADGDPNVAVEILMTQQ 364
               A    +QG+   +E + +LV+MGF++TQVEVAL AADGD NVAVEILM+QQ
Sbjct: 360  TAAAGVPQNQGAAVSEEGIRKLVSMGFDRTQVEVALAAADGDLNVAVEILMSQQ 413


>ref|XP_002267146.2| PREDICTED: uncharacterized protein At3g58460-like [Vitis vinifera]
            gi|296089310|emb|CBI39082.3| unnamed protein product
            [Vitis vinifera]
          Length = 406

 Score =  530 bits (1366), Expect = e-148
 Identities = 269/408 (65%), Positives = 317/408 (77%), Gaps = 3/408 (0%)
 Frame = -2

Query: 1581 MRPNIVSEAGLPTRLSQWWEGVPFLTSCIVIVCGAIYLVCLFVGYDSFAEICFLPSAVIS 1402
            MRPNIVSEAGL TR  QWW+ +PFLTS +VI+C  IYLVCL VGYDSF EICF PSA+IS
Sbjct: 1    MRPNIVSEAGLRTRFGQWWDNIPFLTSAVVIICSIIYLVCLLVGYDSFVEICFSPSAIIS 60

Query: 1401 KFQVYRIFTSILFHGSLLHVLFNMLALVPMGSELERIMGSVRLLHVIMILATSNXXXXXX 1222
            +FQVYRI+T+I+FHGSLLHVLFNM+ALVP+GSELERIMGSVRL ++I++LATSN      
Sbjct: 61   QFQVYRIYTAIIFHGSLLHVLFNMMALVPLGSELERIMGSVRLFYMIVLLATSNAIFHVL 120

Query: 1221 XXXXXXHTPFWSHEYIMNECAIGFSGVLFSMIVIETSLSGVQYRSVFGLFNVPAKWYAWI 1042
                  + PF+S+ Y+MNECAIGFSG+LFSMIVIETSLSG Q RSVFGLFNVPAKWYAWI
Sbjct: 121  IASLVAYNPFYSYHYLMNECAIGFSGILFSMIVIETSLSGAQTRSVFGLFNVPAKWYAWI 180

Query: 1041 LLIVFQLLMSNVSLLGHLCGILSGFAYTYGLYNYLLPGSSFFSTIDSSTLLSTCVRRPKF 862
            LL+VFQLLM+NVSLLGHLCGILSGFAYTYGL+N+L+PG+SF+S I+SS+LLS+CVRRPKF
Sbjct: 181  LLVVFQLLMTNVSLLGHLCGILSGFAYTYGLFNFLIPGTSFYSAIESSSLLSSCVRRPKF 240

Query: 861  ILCTGGNLSGYIXXXXXXXXXXXTLIPGNIWRNVSSWMPGRETAAAQPTQDSRFPGRGRT 682
            ILCTGGN   YI            LI GNIWRN+SSWMP R  +     + SRFPGRGRT
Sbjct: 241  ILCTGGNPQAYIPTHSSSNTSPSGLISGNIWRNLSSWMPQRGMSTQATQESSRFPGRGRT 300

Query: 681  XXXXXXXXXXXXXSDSNLQARLLDNDDPNHLLETTISSTGPQIPDGRRSSVDSLAAVP-- 508
                         SDS L+ARLLDN + +H L+   ++T  Q+ D RRSSVDS AAV   
Sbjct: 301  ---LSSSRSQTTPSDSTLEARLLDNSNLDHSLDVAANTTQQQVLDERRSSVDSAAAVARG 357

Query: 507  -AHHQGSDNFDEELERLVAMGFEKTQVEVALTAADGDPNVAVEILMTQ 367
             AH Q S   +E++++LV+MGFE+TQVEVAL AADGD N+AVEIL  Q
Sbjct: 358  NAHDQDSLVSEEDIQKLVSMGFERTQVEVALAAADGDLNIAVEILSQQ 405


>ref|XP_003553633.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
            At3g58460-like [Glycine max]
          Length = 415

 Score =  526 bits (1354), Expect = e-147
 Identities = 268/414 (64%), Positives = 323/414 (78%), Gaps = 3/414 (0%)
 Frame = -2

Query: 1596 KRKSKMRPNIVSEAGLPTRLSQWWEGVPFLTSCIVIVCGAIYLVCLFVGYDSFAEICFLP 1417
            +R   MRPNIVSEAGLPTR+SQWWE +PFLTS +V+VCG IYLVCL VGYDSF E+CFLP
Sbjct: 2    RRARNMRPNIVSEAGLPTRMSQWWESIPFLTSAVVVVCGIIYLVCLLVGYDSFNEVCFLP 61

Query: 1416 SAVISKFQVYRIFTSILFHGSLLHVLFNMLALVPMGSELERIMGSVRLLHVIMILATSNX 1237
            SAV+S+FQVYRI+TSILFHGSLLHV+FNM+ALVP+GSELERIMGSVRLL+VI+++ATSN 
Sbjct: 62   SAVVSRFQVYRIYTSILFHGSLLHVVFNMMALVPLGSELERIMGSVRLLYVIILVATSNA 121

Query: 1236 XXXXXXXXXXXHTPFWSHEYIMNECAIGFSGVLFSMIVIETSLSGVQYRSVFGLFNVPAK 1057
                       H P  +++Y+MNECAIGFSGVLFSMIVIETSLSGVQ RSVFGLFNVPAK
Sbjct: 122  IFHVLIALLVAHNPLLTYDYLMNECAIGFSGVLFSMIVIETSLSGVQSRSVFGLFNVPAK 181

Query: 1056 WYAWILLIVFQLLMSNVSLLGHLCGILSGFAYTYGLYNYLLPGSSFFSTIDSSTLLSTCV 877
            WYA+ LL+VFQLLM NVSLLGHLCGILSGFAYTYGL+N+L+PG+SF+S+I+SS+ LS+CV
Sbjct: 182  WYAFFLLVVFQLLMQNVSLLGHLCGILSGFAYTYGLFNFLIPGTSFYSSIESSSWLSSCV 241

Query: 876  RRPKFILCTGGNLSGYIXXXXXXXXXXXTLIPGNIWRNVSSWMPGRETAAAQPTQDSRFP 697
            RRPKFI+CTGGN SGYI            L+ GNIWRN+SS+MP RE  +AQ T+D RFP
Sbjct: 242  RRPKFIVCTGGNPSGYIPTQTSQNSTTSGLLSGNIWRNLSSFMPQRE-VSAQSTEDIRFP 300

Query: 696  GRGRTXXXXXXXXXXXXXSDSNLQARLLDNDDPNHLLETTISSTGPQIPDGRRSSVDSLA 517
            GRGRT             SDSNLQARLL++  PN  L+++  S   Q+ +GR        
Sbjct: 301  GRGRTLGAVQGQTASHLHSDSNLQARLLEDSSPNSPLDSSTPSNTQQLSEGRYGRXFXAX 360

Query: 516  AVP---AHHQGSDNFDEELERLVAMGFEKTQVEVALTAADGDPNVAVEILMTQQ 364
             +       +G+   +E +++LV+MGF++TQVEVAL AADGD NVAVEILM+QQ
Sbjct: 361  LITDGGCXVEGAVVSEERIKKLVSMGFDRTQVEVALAAADGDLNVAVEILMSQQ 414


>ref|XP_002531598.1| Rhomboid protein, putative [Ricinus communis]
            gi|223528794|gb|EEF30801.1| Rhomboid protein, putative
            [Ricinus communis]
          Length = 397

 Score =  524 bits (1350), Expect = e-146
 Identities = 267/406 (65%), Positives = 316/406 (77%)
 Frame = -2

Query: 1581 MRPNIVSEAGLPTRLSQWWEGVPFLTSCIVIVCGAIYLVCLFVGYDSFAEICFLPSAVIS 1402
            MRPNIV+EAGLPTR+ QWWE +PFLTS IVIVCG IYL CL +GYDSF EICFLPSA+IS
Sbjct: 1    MRPNIVTEAGLPTRVGQWWESIPFLTSAIVIVCGTIYLACLLIGYDSFFEICFLPSAIIS 60

Query: 1401 KFQVYRIFTSILFHGSLLHVLFNMLALVPMGSELERIMGSVRLLHVIMILATSNXXXXXX 1222
             FQVYRI+TSILFHGSLLHV FNM+ALVP+GSELERIMGSVRLL++ ++LATSN      
Sbjct: 61   HFQVYRIYTSILFHGSLLHVFFNMMALVPLGSELERIMGSVRLLYLTILLATSNAIFHLF 120

Query: 1221 XXXXXXHTPFWSHEYIMNECAIGFSGVLFSMIVIETSLSGVQYRSVFGLFNVPAKWYAWI 1042
                  H PF S ++++NECAIGFSG+LFSMIVIETSLSGVQ RSVFGLFNVPAKWYA+I
Sbjct: 121  IATLVAHNPFHSDQHLINECAIGFSGILFSMIVIETSLSGVQSRSVFGLFNVPAKWYAFI 180

Query: 1041 LLIVFQLLMSNVSLLGHLCGILSGFAYTYGLYNYLLPGSSFFSTIDSSTLLSTCVRRPKF 862
            LL+VFQLLM+NVSLLGHLCGILSGFAYTYGL+N+L+PGSSF+S+I++S+ LS+CVRRPKF
Sbjct: 181  LLVVFQLLMTNVSLLGHLCGILSGFAYTYGLFNFLMPGSSFYSSIEASSWLSSCVRRPKF 240

Query: 861  ILCTGGNLSGYIXXXXXXXXXXXTLIPGNIWRNVSSWMPGRETAAAQPTQDSRFPGRGRT 682
            I+CTGGN + YI            L  GNIWRN+SSWMP RET ++Q T+D+RFPGRGRT
Sbjct: 241  IMCTGGNPTAYIPTYSSQNMNTGGLFSGNIWRNLSSWMPQRET-SSQSTEDNRFPGRGRT 299

Query: 681  XXXXXXXXXXXXXSDSNLQARLLDNDDPNHLLETTISSTGPQIPDGRRSSVDSLAAVPAH 502
                         SDSNLQARLLDN + N       + T  ++ DG     DS+A+    
Sbjct: 300  LSSTGSQTIPAVSSDSNLQARLLDNSNSNLSSNLAATGTPGRLTDGSFQGEDSVAS---- 355

Query: 501  HQGSDNFDEELERLVAMGFEKTQVEVALTAADGDPNVAVEILMTQQ 364
                   DEE+++LV+MGF+KTQVE+AL AADGD NVAVEILM+QQ
Sbjct: 356  -------DEEIQKLVSMGFDKTQVEIALAAADGDLNVAVEILMSQQ 394


>ref|XP_002309277.1| predicted protein [Populus trichocarpa] gi|222855253|gb|EEE92800.1|
            predicted protein [Populus trichocarpa]
          Length = 410

 Score =  523 bits (1347), Expect = e-146
 Identities = 266/410 (64%), Positives = 320/410 (78%), Gaps = 4/410 (0%)
 Frame = -2

Query: 1581 MRPNIVSEAGLPTRLSQWWEGVPFLTSCIVIVCGAIYLVCLFVGYDSFAEICFLPSAVIS 1402
            MRPNIV+EAGL TR+ QWWE +PFLTS +V+VCG IYLVCL +GYDSF EICFLP+AV+S
Sbjct: 1    MRPNIVTEAGLQTRVGQWWESIPFLTSAVVVVCGVIYLVCLLIGYDSFYEICFLPTAVVS 60

Query: 1401 KFQVYRIFTSILFHGSLLHVLFNMLALVPMGSELERIMGSVRLLHVIMILATSNXXXXXX 1222
             FQVYRI+TSI FHGSLLHVLFNMLALVP+GSELERIMGS+RL ++I++LAT+N      
Sbjct: 61   HFQVYRIYTSIFFHGSLLHVLFNMLALVPLGSELERIMGSIRLAYLIILLATTNAIFHLF 120

Query: 1221 XXXXXXHTPFWSHEYIMNECAIGFSGVLFSMIVIETSLSGVQYRSVFGLFNVPAKWYAWI 1042
                  H PF  ++Y+++ECAIGFSG+LFSMIVIETSLSGVQ RSVFGLFNVPAKWYA+I
Sbjct: 121  IALLVAHNPFHPYQYLLDECAIGFSGILFSMIVIETSLSGVQSRSVFGLFNVPAKWYAFI 180

Query: 1041 LLIVFQLLMSNVSLLGHLCGILSGFAYTYGLYNYLLPGSSFFSTIDSSTLLSTCVRRPKF 862
            LL+ FQLLM+NVSLLGHLCGILSGFAYTYGL+N+L+PG+S FS I++S+ LS+CVRRPKF
Sbjct: 181  LLVAFQLLMTNVSLLGHLCGILSGFAYTYGLFNFLMPGASSFSAIEASSWLSSCVRRPKF 240

Query: 861  ILCTGGNLSGYIXXXXXXXXXXXTLIPGNIWRNVSSWMPGRETAAAQPTQDSRFPGRGRT 682
            ILCTGG+ + YI            L+ GNIWRN+SSWMP RET +AQ  QD RFPG GR 
Sbjct: 241  ILCTGGSPTSYIPTHSGQNTTSSGLLSGNIWRNLSSWMPQRET-SAQAGQDYRFPGSGRA 299

Query: 681  XXXXXXXXXXXXXSDSNLQARLLDNDDPNHLLETTISSTGPQIPDGRRSSVD-SLAAVPA 505
                         SDSNLQARLLDN +PN      +++T     DGRRS VD ++ A P 
Sbjct: 300  LGSGQSETVPAVNSDSNLQARLLDNSNPNRSSHLGVTATREPPLDGRRSVVDNAVGATPV 359

Query: 504  H---HQGSDNFDEELERLVAMGFEKTQVEVALTAADGDPNVAVEILMTQQ 364
            H   HQ S   +E++++LV+MGF+KTQVEVA++AADGD NVAVEILM+QQ
Sbjct: 360  HPALHQDSAPSEEQIQKLVSMGFDKTQVEVAISAADGDLNVAVEILMSQQ 409


Top