BLASTX nr result
ID: Cimicifuga21_contig00003553
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00003553
(1491 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002262945.2| PREDICTED: preprotein translocase subunit se... 673 0.0
ref|XP_002533181.1| protein translocase secy subunit, putative [... 662 0.0
emb|CBI24093.3| unnamed protein product [Vitis vinifera] 661 0.0
ref|XP_004169068.1| PREDICTED: preprotein translocase subunit SC... 652 0.0
ref|XP_004149897.1| PREDICTED: preprotein translocase subunit SC... 652 0.0
>ref|XP_002262945.2| PREDICTED: preprotein translocase subunit secY, chloroplastic-like
[Vitis vinifera]
Length = 546
Score = 673 bits (1736), Expect = 0.0
Identities = 356/484 (73%), Positives = 384/484 (79%), Gaps = 9/484 (1%)
Frame = +2
Query: 65 MLLTVREASLSPLYLNXXXXXXXXXXXXIIPQ-RASICRASFTVETKPNKINNN------ 223
M++TVREAS S L N P+ R S+ RASF V TKPN N+
Sbjct: 1 MMITVREASSSALCFNLNLSRSSHPASTASPRLRNSVSRASFAVHTKPNSTPNSWNLALF 60
Query: 224 -KRYDGSVFDPLGIDSDTSLGFNAAWENVLAFFSQTFDSTSGTRKDKSLS-RGVAAAIED 397
G VFDPLGIDSD SLG NA WE+ L SQTF STS T+KDKS S +GVAAAIED
Sbjct: 61 CNSCKGPVFDPLGIDSDKSLGLNATWESALGLLSQTFGSTSSTKKDKSASGQGVAAAIED 120
Query: 398 SSIDFGDFFKGPLPGKFLQLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFS 577
SSIDFGDFFKGPLPGKFL+LLG LALSRLG+Y+PLGGVNREAFVGNLDQNSLL+TLDSFS
Sbjct: 121 SSIDFGDFFKGPLPGKFLKLLGLLALSRLGVYVPLGGVNREAFVGNLDQNSLLTTLDSFS 180
Query: 578 GGGIGRLGICSLGIVPFINAQIVFQLLTQVYPKLQELQKKEGESGRKKILQYTRYASVGF 757
GGGIGRLGICSLGIVPFINAQIVFQLLTQ+YPKLQ+LQK+EGE+GRKK+LQYTRYASVGF
Sbjct: 181 GGGIGRLGICSLGIVPFINAQIVFQLLTQIYPKLQDLQKREGETGRKKVLQYTRYASVGF 240
Query: 758 AIVQAIGQVLYLRPYVNDFSTEWXXXXXXXXXXXXXXXXYIGERISDLKLGNGTSLLIFT 937
A+VQAIGQVL+LRPYVNDFST+W YIGERISDLKLGNGTSLLIFT
Sbjct: 241 ALVQAIGQVLFLRPYVNDFSTQWVLSSVTLLTLGSVLTTYIGERISDLKLGNGTSLLIFT 300
Query: 938 SIISYLPASFGRTAAEAFQDGNYXXXXXXXXXXXXXXXXXXYVQEAERKIPLNYASRYNS 1117
SIISYLPASFGRT A+AFQDGNY YVQEAERKIPLNYASRY +
Sbjct: 301 SIISYLPASFGRTVAQAFQDGNYIGLVIIIISFFLLVLGIVYVQEAERKIPLNYASRYTN 360
Query: 1118 QSGGLQKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGXXXXXXXXXXXNPGGALYL 1297
++GGLQKSAYLPFKVNSSGVMPIIFSTSSLALPGT++RFTG NPGG+LYL
Sbjct: 361 RTGGLQKSAYLPFKVNSSGVMPIIFSTSSLALPGTVSRFTGLAALKKAALALNPGGSLYL 420
Query: 1298 PTNILFIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAYIKTVLSRISVLGS 1477
PTNIL IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAA+IK VLSRISVLGS
Sbjct: 421 PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFIKMVLSRISVLGS 480
Query: 1478 AFLA 1489
FLA
Sbjct: 481 GFLA 484
>ref|XP_002533181.1| protein translocase secy subunit, putative [Ricinus communis]
gi|223527015|gb|EEF29204.1| protein translocase secy
subunit, putative [Ricinus communis]
Length = 557
Score = 662 bits (1707), Expect = 0.0
Identities = 354/495 (71%), Positives = 383/495 (77%), Gaps = 20/495 (4%)
Frame = +2
Query: 65 MLLTVREAS----LSPLYLNXXXXXXXXXXXXIIPQRAS-------ICRASFTVETKPNK 211
ML+TVREA+ SP+ LN I P R S CRASF+++ +P
Sbjct: 1 MLITVREAAAASPFSPICLNLSSLSANPIKYKI-PSRPSSYRLKTCACRASFSLQNRPTS 59
Query: 212 IN---------NNKRYDGSVFDPLGIDSDTSLGFNAAWENVLAFFSQTFDSTSGTRKDKS 364
N +GSVFDPLGI++D G NAAWE++LA S F+S S T++DK
Sbjct: 60 STTTTTTTKPWNTNSCEGSVFDPLGINTDEYSGVNAAWESILALLSPIFESASSTKRDKP 119
Query: 365 LSRGVAAAIEDSSIDFGDFFKGPLPGKFLQLLGYLALSRLGIYIPLGGVNREAFVGNLDQ 544
+RGVAAAIEDSSIDFGDFFKGPLPGKFL+LLG+LALSRLGIYIPLGGVNR+AFVGNLDQ
Sbjct: 120 SARGVAAAIEDSSIDFGDFFKGPLPGKFLKLLGFLALSRLGIYIPLGGVNRDAFVGNLDQ 179
Query: 545 NSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLTQVYPKLQELQKKEGESGRKKI 724
NSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLL QVYPKLQ+LQK+EGE+GRKKI
Sbjct: 180 NSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQVYPKLQDLQKREGEAGRKKI 239
Query: 725 LQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTEWXXXXXXXXXXXXXXXXYIGERISDLK 904
LQYTRYASVGFAIVQAIGQVLYLRPYVNDFST+W Y+GER SDLK
Sbjct: 240 LQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTQWVLSSVTLLTLGSVFTTYLGERTSDLK 299
Query: 905 LGNGTSLLIFTSIISYLPASFGRTAAEAFQDGNYXXXXXXXXXXXXXXXXXXYVQEAERK 1084
LGNGTSLLIFTSIISYLPASFGRT A+AFQDGNY YVQEAERK
Sbjct: 300 LGNGTSLLIFTSIISYLPASFGRTVAQAFQDGNYVGLATIIISFFLLVLGIVYVQEAERK 359
Query: 1085 IPLNYASRYNSQSGGLQKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGXXXXXXXX 1264
IPLNYASRY S++GGLQKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTG
Sbjct: 360 IPLNYASRYTSRTGGLQKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGISALKKAA 419
Query: 1265 XXXNPGGALYLPTNILFIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAYIK 1444
NPGGA YLPTNIL IAFFNYYYTFLQLDPDDVSEQLKRQGASIP VRPGKSTAA++K
Sbjct: 420 VALNPGGAFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPQVRPGKSTAAFLK 479
Query: 1445 TVLSRISVLGSAFLA 1489
TVLSRISVLGS FLA
Sbjct: 480 TVLSRISVLGSGFLA 494
>emb|CBI24093.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 661 bits (1706), Expect = 0.0
Identities = 357/515 (69%), Positives = 386/515 (74%), Gaps = 40/515 (7%)
Frame = +2
Query: 65 MLLTVREASLSPLYLNXXXXXXXXXXXXIIPQ-RASICRASFTVETKPNKINN------- 220
M++TVREAS S L N P+ R S+ RASF V TKPN N
Sbjct: 1 MMITVREASSSALCFNLNLSRSSHPASTASPRLRNSVSRASFAVHTKPNSTPNSWNLALF 60
Query: 221 -NKRY------------------------------DGSVFDPLGIDSDTSLGFNAAWENV 307
N+ + G VFDPLGIDSD SLG NA WE+
Sbjct: 61 CNRTFCGKKILRPTMIIYIPLDVSPNMINMDSSFCKGPVFDPLGIDSDKSLGLNATWESA 120
Query: 308 LAFFSQTFDSTSGTRKDKSLS-RGVAAAIEDSSIDFGDFFKGPLPGKFLQLLGYLALSRL 484
L SQTF STS T+KDKS S +GVAAAIEDSSIDFGDFFKGPLPGKFL+LLG LALSRL
Sbjct: 121 LGLLSQTFGSTSSTKKDKSASGQGVAAAIEDSSIDFGDFFKGPLPGKFLKLLGLLALSRL 180
Query: 485 GIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLTQ 664
G+Y+PLGGVNREAFVGNLDQNSLL+TLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLTQ
Sbjct: 181 GVYVPLGGVNREAFVGNLDQNSLLTTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLTQ 240
Query: 665 VYPKLQELQKKEGESGRKKILQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTEWXXXXXX 844
+YPKLQ+LQK+EGE+GRKK+LQYTRYASVGFA+VQAIGQVL+LRPYVNDFST+W
Sbjct: 241 IYPKLQDLQKREGETGRKKVLQYTRYASVGFALVQAIGQVLFLRPYVNDFSTQWVLSSVT 300
Query: 845 XXXXXXXXXXYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTAAEAFQDGNYXXXXXX 1024
YIGERISDLKLGNGTSLLIFTSIISYLPASFGRT A+AFQDGNY
Sbjct: 301 LLTLGSVLTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTVAQAFQDGNYIGLVII 360
Query: 1025 XXXXXXXXXXXXYVQEAERKIPLNYASRYNSQSGGLQKSAYLPFKVNSSGVMPIIFSTSS 1204
YVQEAERKIPLNYASRY +++GGLQKSAYLPFKVNSSGVMPIIFSTSS
Sbjct: 361 IISFFLLVLGIVYVQEAERKIPLNYASRYTNRTGGLQKSAYLPFKVNSSGVMPIIFSTSS 420
Query: 1205 LALPGTLARFTGXXXXXXXXXXXNPGGALYLPTNILFIAFFNYYYTFLQLDPDDVSEQLK 1384
LALPGT++RFTG NPGG+LYLPTNIL IAFFNYYYTFLQLDPDDVSEQLK
Sbjct: 421 LALPGTVSRFTGLAALKKAALALNPGGSLYLPTNILLIAFFNYYYTFLQLDPDDVSEQLK 480
Query: 1385 RQGASIPLVRPGKSTAAYIKTVLSRISVLGSAFLA 1489
RQGASIPLVRPGKSTAA+IK VLSRISVLGS FLA
Sbjct: 481 RQGASIPLVRPGKSTAAFIKMVLSRISVLGSGFLA 515
>ref|XP_004169068.1| PREDICTED: preprotein translocase subunit SCY1, chloroplastic-like
[Cucumis sativus]
Length = 546
Score = 652 bits (1682), Expect = 0.0
Identities = 352/485 (72%), Positives = 376/485 (77%), Gaps = 10/485 (2%)
Frame = +2
Query: 65 MLLTVREA---SLSPLYLNXXXXXXXXXXXXIIPQRASICRASFTVETKPNKINN----- 220
ML+T EA S SPL P R S+ ASF+V KP +
Sbjct: 1 MLITFTEAVAPSSSPLSFTLSTHSLTNSNRFPRP-RTSLTPASFSVPGKPTSTKSWNLRL 59
Query: 221 -NKRYDGSVFDPLGIDSDTSLGFNAAWENVLAFFSQTFDSTSGTRKDKSLS-RGVAAAIE 394
+ + SVFDPLGI D S F++ WEN L +F QTF+S S T+KDKS S RG+AAAIE
Sbjct: 60 VSNSSESSVFDPLGIRPDLSSEFSSTWENFLGYFGQTFNSASSTKKDKSPSARGLAAAIE 119
Query: 395 DSSIDFGDFFKGPLPGKFLQLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSF 574
DSSID GDFFKGPLPGKFLQLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSF
Sbjct: 120 DSSIDIGDFFKGPLPGKFLQLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSF 179
Query: 575 SGGGIGRLGICSLGIVPFINAQIVFQLLTQVYPKLQELQKKEGESGRKKILQYTRYASVG 754
SGGGIGRLGICSLGIVPFINAQIVFQLL Q+YPKLQ+LQK+EGE+GRKKILQYTRYASVG
Sbjct: 180 SGGGIGRLGICSLGIVPFINAQIVFQLLAQIYPKLQDLQKREGEAGRKKILQYTRYASVG 239
Query: 755 FAIVQAIGQVLYLRPYVNDFSTEWXXXXXXXXXXXXXXXXYIGERISDLKLGNGTSLLIF 934
FAIVQAIGQVL+LRPYVNDFSTEW YIGERI+DLKLGNGTSLLIF
Sbjct: 240 FAIVQAIGQVLFLRPYVNDFSTEWVLSSVTLLTLGSVVTTYIGERITDLKLGNGTSLLIF 299
Query: 935 TSIISYLPASFGRTAAEAFQDGNYXXXXXXXXXXXXXXXXXXYVQEAERKIPLNYASRYN 1114
TSIISYLPASFGRT A+AFQDGNY YVQEAERKIPLNYASRY
Sbjct: 300 TSIISYLPASFGRTTAQAFQDGNYVGLVAIIISFFLLVLGIVYVQEAERKIPLNYASRYT 359
Query: 1115 SQSGGLQKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGXXXXXXXXXXXNPGGALY 1294
S+ GGLQKSAYLPFKVNSSGVMPIIFSTS+LALPGTLARFTG NPGG+ Y
Sbjct: 360 SRGGGLQKSAYLPFKVNSSGVMPIIFSTSTLALPGTLARFTGLSVLKKAALALNPGGSFY 419
Query: 1295 LPTNILFIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAYIKTVLSRISVLG 1474
LPTNIL IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTA+Y+K VLSRISVLG
Sbjct: 420 LPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTASYLKAVLSRISVLG 479
Query: 1475 SAFLA 1489
SAFLA
Sbjct: 480 SAFLA 484
>ref|XP_004149897.1| PREDICTED: preprotein translocase subunit SCY1, chloroplastic-like
[Cucumis sativus]
Length = 571
Score = 652 bits (1682), Expect = 0.0
Identities = 352/485 (72%), Positives = 376/485 (77%), Gaps = 10/485 (2%)
Frame = +2
Query: 65 MLLTVREA---SLSPLYLNXXXXXXXXXXXXIIPQRASICRASFTVETKPNKINN----- 220
ML+T EA S SPL P R S+ ASF+V KP +
Sbjct: 1 MLITFTEAVAPSSSPLSFTLSTHSLTNSNRFPRP-RTSLTPASFSVPGKPTSTKSWNLRL 59
Query: 221 -NKRYDGSVFDPLGIDSDTSLGFNAAWENVLAFFSQTFDSTSGTRKDKSLS-RGVAAAIE 394
+ + SVFDPLGI D S F++ WEN L +F QTF+S S T+KDKS S RG+AAAIE
Sbjct: 60 VSNSSESSVFDPLGIRPDLSSEFSSTWENFLGYFGQTFNSASSTKKDKSPSARGLAAAIE 119
Query: 395 DSSIDFGDFFKGPLPGKFLQLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSF 574
DSSID GDFFKGPLPGKFLQLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSF
Sbjct: 120 DSSIDIGDFFKGPLPGKFLQLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSF 179
Query: 575 SGGGIGRLGICSLGIVPFINAQIVFQLLTQVYPKLQELQKKEGESGRKKILQYTRYASVG 754
SGGGIGRLGICSLGIVPFINAQIVFQLL Q+YPKLQ+LQK+EGE+GRKKILQYTRYASVG
Sbjct: 180 SGGGIGRLGICSLGIVPFINAQIVFQLLAQIYPKLQDLQKREGEAGRKKILQYTRYASVG 239
Query: 755 FAIVQAIGQVLYLRPYVNDFSTEWXXXXXXXXXXXXXXXXYIGERISDLKLGNGTSLLIF 934
FAIVQAIGQVL+LRPYVNDFSTEW YIGERI+DLKLGNGTSLLIF
Sbjct: 240 FAIVQAIGQVLFLRPYVNDFSTEWVLSSVTLLTLGSVVTTYIGERITDLKLGNGTSLLIF 299
Query: 935 TSIISYLPASFGRTAAEAFQDGNYXXXXXXXXXXXXXXXXXXYVQEAERKIPLNYASRYN 1114
TSIISYLPASFGRT A+AFQDGNY YVQEAERKIPLNYASRY
Sbjct: 300 TSIISYLPASFGRTTAQAFQDGNYVGLVAIIISFFLLVLGIVYVQEAERKIPLNYASRYT 359
Query: 1115 SQSGGLQKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGXXXXXXXXXXXNPGGALY 1294
S+ GGLQKSAYLPFKVNSSGVMPIIFSTS+LALPGTLARFTG NPGG+ Y
Sbjct: 360 SRGGGLQKSAYLPFKVNSSGVMPIIFSTSTLALPGTLARFTGLSVLKKAALALNPGGSFY 419
Query: 1295 LPTNILFIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAYIKTVLSRISVLG 1474
LPTNIL IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTA+Y+K VLSRISVLG
Sbjct: 420 LPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTASYLKAVLSRISVLG 479
Query: 1475 SAFLA 1489
SAFLA
Sbjct: 480 SAFLA 484