BLASTX nr result

ID: Cimicifuga21_contig00003546 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003546
         (527 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36843.1| unknown [Lotus japonicus]                              112   1e-39
ref|XP_002275073.1| PREDICTED: ubiquitin-like isoform 1 [Vitis v...   111   4e-39
ref|XP_003627265.1| Autophagy-like protein [Medicago truncatula]...   110   9e-39
ref|NP_001236589.1| uncharacterized protein LOC100527733 [Glycin...   110   2e-38
ref|NP_001235450.1| uncharacterized protein LOC100527905 [Glycin...   110   3e-38

>gb|AFK36843.1| unknown [Lotus japonicus]
          Length = 94

 Score =  112 bits (280), Expect(2) = 1e-39
 Identities = 49/52 (94%), Positives = 52/52 (100%)
 Frame = +3

Query: 282 DFLRRQLHRDTLFVYINSAFSPNPDELVIDLYNNFGFDGKLVVNYACSMAWG 437
           DFLRRQLHRDTLFVY+NSAFSPNPDEL+IDLYNNFGFDGKL+VNYACSMAWG
Sbjct: 43  DFLRRQLHRDTLFVYVNSAFSPNPDELIIDLYNNFGFDGKLIVNYACSMAWG 94



 Score = 75.9 bits (185), Expect(2) = 1e-39
 Identities = 37/41 (90%), Positives = 40/41 (97%)
 Frame = +2

Query: 74  MAAESPSSVRKVVVHLRATGDAPILKQAKFKIAGSDKFAKV 196
           M+ ESPSSVRKVVVHLRATGDAPILKQ+KFKIAG+DKFAKV
Sbjct: 1   MSVESPSSVRKVVVHLRATGDAPILKQSKFKIAGTDKFAKV 41


>ref|XP_002275073.1| PREDICTED: ubiquitin-like isoform 1 [Vitis vinifera]
           gi|359482638|ref|XP_003632796.1| PREDICTED:
           ubiquitin-like isoform 2 [Vitis vinifera]
           gi|297743012|emb|CBI35879.3| unnamed protein product
           [Vitis vinifera]
          Length = 94

 Score =  111 bits (278), Expect(2) = 4e-39
 Identities = 50/52 (96%), Positives = 52/52 (100%)
 Frame = +3

Query: 282 DFLRRQLHRDTLFVYINSAFSPNPDELVIDLYNNFGFDGKLVVNYACSMAWG 437
           +FLRRQLHRDTLFVY+NSAFSPNPDELVIDLYNNFGFDGKLVVNYACSMAWG
Sbjct: 43  EFLRRQLHRDTLFVYVNSAFSPNPDELVIDLYNNFGFDGKLVVNYACSMAWG 94



 Score = 75.1 bits (183), Expect(2) = 4e-39
 Identities = 37/41 (90%), Positives = 39/41 (95%)
 Frame = +2

Query: 74  MAAESPSSVRKVVVHLRATGDAPILKQAKFKIAGSDKFAKV 196
           MA+ESPSS RKVVVHLRATGDAPILKQAKFKI G+DKFAKV
Sbjct: 1   MASESPSSARKVVVHLRATGDAPILKQAKFKIPGTDKFAKV 41


>ref|XP_003627265.1| Autophagy-like protein [Medicago truncatula]
           gi|122187475|sp|Q1SF86.1|ATG12_MEDTR RecName:
           Full=Ubiquitin-like protein ATG12; AltName:
           Full=Autophagy-related protein 12; Short=APG12-like
           gi|355521287|gb|AET01741.1| Autophagy-like protein
           [Medicago truncatula]
          Length = 95

 Score =  110 bits (274), Expect(2) = 9e-39
 Identities = 49/52 (94%), Positives = 52/52 (100%)
 Frame = +3

Query: 282 DFLRRQLHRDTLFVYINSAFSPNPDELVIDLYNNFGFDGKLVVNYACSMAWG 437
           DFLRRQLHR++LFVY+NSAFSPNPDELVIDLYNNFGFDGKLVVNYACSMAWG
Sbjct: 44  DFLRRQLHRESLFVYVNSAFSPNPDELVIDLYNNFGFDGKLVVNYACSMAWG 95



 Score = 75.5 bits (184), Expect(2) = 9e-39
 Identities = 37/40 (92%), Positives = 40/40 (100%)
 Frame = +2

Query: 77  AAESPSSVRKVVVHLRATGDAPILKQAKFKIAGSDKFAKV 196
           AAESP+SVRKVVVHLRATGDAPILKQ+KFKIAG+DKFAKV
Sbjct: 3   AAESPTSVRKVVVHLRATGDAPILKQSKFKIAGTDKFAKV 42


>ref|NP_001236589.1| uncharacterized protein LOC100527733 [Glycine max]
           gi|255633072|gb|ACU16891.1| unknown [Glycine max]
          Length = 94

 Score =  110 bits (275), Expect(2) = 2e-38
 Identities = 50/52 (96%), Positives = 52/52 (100%)
 Frame = +3

Query: 282 DFLRRQLHRDTLFVYINSAFSPNPDELVIDLYNNFGFDGKLVVNYACSMAWG 437
           DFLRRQLHR+TLFVYINSAFSPNPDELVIDL+NNFGFDGKLVVNYACSMAWG
Sbjct: 43  DFLRRQLHRETLFVYINSAFSPNPDELVIDLFNNFGFDGKLVVNYACSMAWG 94



 Score = 74.3 bits (181), Expect(2) = 2e-38
 Identities = 36/41 (87%), Positives = 39/41 (95%)
 Frame = +2

Query: 74  MAAESPSSVRKVVVHLRATGDAPILKQAKFKIAGSDKFAKV 196
           M+AESPSS RKVVVHLRATGD PILKQ+KFKIAG+DKFAKV
Sbjct: 1   MSAESPSSARKVVVHLRATGDVPILKQSKFKIAGTDKFAKV 41


>ref|NP_001235450.1| uncharacterized protein LOC100527905 [Glycine max]
           gi|255633518|gb|ACU17117.1| unknown [Glycine max]
          Length = 94

 Score =  110 bits (274), Expect(2) = 3e-38
 Identities = 49/52 (94%), Positives = 52/52 (100%)
 Frame = +3

Query: 282 DFLRRQLHRDTLFVYINSAFSPNPDELVIDLYNNFGFDGKLVVNYACSMAWG 437
           DFLRRQLHR+TLFVY+NSAFSPNPDELVIDL+NNFGFDGKLVVNYACSMAWG
Sbjct: 43  DFLRRQLHRETLFVYVNSAFSPNPDELVIDLFNNFGFDGKLVVNYACSMAWG 94



 Score = 73.9 bits (180), Expect(2) = 3e-38
 Identities = 36/41 (87%), Positives = 40/41 (97%)
 Frame = +2

Query: 74  MAAESPSSVRKVVVHLRATGDAPILKQAKFKIAGSDKFAKV 196
           M++E PSSVRKVVVHLRATGDAPILKQ+KFKIAG+DKFAKV
Sbjct: 1   MSSELPSSVRKVVVHLRATGDAPILKQSKFKIAGTDKFAKV 41


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