BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003544
         (1351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264285.1| PREDICTED: U3 small nucleolar RNA-associated...   493   e-137
ref|XP_002281926.1| PREDICTED: U3 small nucleolar RNA-associated...   483   e-134
emb|CBI17936.3| unnamed protein product [Vitis vinifera]              482   e-133
ref|XP_002520985.1| nucleotide binding protein, putative [Ricinu...   450   e-124
ref|XP_004149687.1| PREDICTED: U3 small nucleolar RNA-associated...   441   e-121

>ref|XP_002264285.1| PREDICTED: U3 small nucleolar RNA-associated protein 18 homolog
            [Vitis vinifera]
          Length = 569

 Score =  493 bits (1270), Expect = e-137
 Identities = 266/457 (58%), Positives = 314/457 (68%), Gaps = 9/457 (1%)
 Frame = +1

Query: 4    MDFISQNALQRKQVNEPKVEDINKPLLLEEVEATEDAKDCS--LVNLXXXXXXXXXXXXX 177
            M  ISQN L + ++N+ K EDI+ P  LE  E  ED K+       +             
Sbjct: 1    MSLISQNILPKNRINKTKREDIDIPSPLEGNEDIEDRKELGPDTSRIKRRKKERKEEEKQ 60

Query: 178  XXXXXXXXXXRHENFVFGSFYSQSEFGK--EEETKNMFNEGPALFFTDRSASGVVTVYED 351
                      + EN +FGS Y+  EFGK  EEE ++M  +  ALFFTDRSA+  V+VYE+
Sbjct: 61   LEVEQEREMKKLENLLFGSLYAPVEFGKGGEEEVRDMVEKDSALFFTDRSANSSVSVYEE 120

Query: 352  EAEYQEEDNAEVEIRDRQPAWVDXXXXXXGNTNANIAKKHRLKKLRTKEDEGSIALSDYG 531
            +AE  EE N E + + R+P WVD        TN NIAK +RL+KLR +EDE  I+ S Y 
Sbjct: 121  DAELPEESNDEEDTKQRKPVWVDEEEE---RTNINIAKVNRLRKLRKEEDESVISGSAYV 177

Query: 532  SRLRAQHVNLNHGTEWAQLGSKKRNXXXXXXXXXXXXNNV-----YEDNQDNDSILRTNE 696
            SRLRAQH  LN GTEWAQL S+ R+            N       Y+D +  D ILRT+E
Sbjct: 178  SRLRAQHAKLNPGTEWAQLDSQLRDCSSYDDESSDEENGAVVAPGYKDVEAVDDILRTDE 237

Query: 697  DLVVKSDTKLLPGLLEYTRLVDANAQDPSNGPINSVQFHRNXXXXXXXXXXXXXXFFQID 876
            DL+VKS TKLLPGLLEY+RL+DANA+DPSNGPINSVQFHRN              FFQID
Sbjct: 238  DLIVKSSTKLLPGLLEYSRLIDANAEDPSNGPINSVQFHRNAQLLLTAGLDRRLRFFQID 297

Query: 877  GKRNTMMQSIFLEDCPIYKASFLPDGSQVIVGGRRKFFYSFDLVKAQFDRIGPLTGRDEK 1056
            GKRNT +QSIFL+DCPI KASFLPDGS+VI+ GRRKFFYSFDLVKA+ D+IGPLTGR+EK
Sbjct: 298  GKRNTKIQSIFLDDCPIRKASFLPDGSEVIIAGRRKFFYSFDLVKARVDKIGPLTGREEK 357

Query: 1057 SLESFEISPDSRTIAFLGHGGYILLVSCKTKELIGTLKMNGNARSLAFNDDGTQLLSSGD 1236
            SLE FE+SPDS TIAF+G+ G ILLVS +TKELIGT+KMNG  RSLAF DDG QLLSSG 
Sbjct: 358  SLEVFEVSPDSGTIAFVGNEGCILLVSSRTKELIGTVKMNGTVRSLAFTDDGKQLLSSGG 417

Query: 1237 DGHIYHWDLRTRTCFHKAVDEGCIKGSALGTSPNGAL 1347
            DGHIYHWDLRTRTCFHKA+DEGCI G++L  SPNGAL
Sbjct: 418  DGHIYHWDLRTRTCFHKAIDEGCINGTSLCASPNGAL 454


>ref|XP_002281926.1| PREDICTED: U3 small nucleolar RNA-associated protein 18 homolog
            [Vitis vinifera]
          Length = 568

 Score =  483 bits (1244), Expect = e-134
 Identities = 264/457 (57%), Positives = 309/457 (67%), Gaps = 9/457 (1%)
 Frame = +1

Query: 4    MDFISQNALQRKQVNEPKVEDINKPLLLEEVEATEDAKDC--SLVNLXXXXXXXXXXXXX 177
            M  ISQN L++ +VN+ K ED++ P  LE  E  ED K+    ++               
Sbjct: 1    MSLISQNILRKNRVNKTKREDVDVPSPLEGNE-NEDRKELVPDILRTKKRKKEHKEEDKQ 59

Query: 178  XXXXXXXXXXRHENFVFGSFYSQSEFGK--EEETKNMFNEGPALFFTDRSASGVVTVYED 351
                      + ENF+FGS Y   EFGK  EEE +    +   LFFTDRSA+  ++ YE+
Sbjct: 60   LEVEEEREMKKLENFLFGSLYDPVEFGKVGEEEVQTKAEKDSTLFFTDRSANSALSFYEE 119

Query: 352  EAEYQEEDNAEVEIRDRQPAWVDXXXXXXGNTNANIAKKHRLKKLRTKEDEGSIALSDYG 531
            +AE+ EE + E + + R+P WVD        TN NI+K +RL+KLR +EDE  I+ S Y 
Sbjct: 120  DAEFPEESSGEEDTKQRKPVWVDEEEE---KTNINISKVNRLRKLRKEEDESLISGSVYV 176

Query: 532  SRLRAQHVNLNHGTEWAQLGSKKRNXXXXXXXXXXXXNNV-----YEDNQDNDSILRTNE 696
            SRLRAQH  LN GTEWAQL S  R             N       ++D +  D ILRTNE
Sbjct: 177  SRLRAQHAKLNPGTEWAQLDSWSRTYSSDYGESSDEENGAVIAPGHKDVEAVDDILRTNE 236

Query: 697  DLVVKSDTKLLPGLLEYTRLVDANAQDPSNGPINSVQFHRNXXXXXXXXXXXXXXFFQID 876
            DLVVKS TKLLPGLLEY+RLVDANA+DPSNGPINSVQFH N              FFQID
Sbjct: 237  DLVVKSGTKLLPGLLEYSRLVDANAEDPSNGPINSVQFHCNAQLLLTAGLDRRVRFFQID 296

Query: 877  GKRNTMMQSIFLEDCPIYKASFLPDGSQVIVGGRRKFFYSFDLVKAQFDRIGPLTGRDEK 1056
            G+RNT +QSIFLEDCPI KASFLPDGSQVI+ GRRKFFYSFDLVKA+ D+IGPL GR+EK
Sbjct: 297  GRRNTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSFDLVKAKVDKIGPLIGREEK 356

Query: 1057 SLESFEISPDSRTIAFLGHGGYILLVSCKTKELIGTLKMNGNARSLAFNDDGTQLLSSGD 1236
            SLE+FE+SPDS TIAF+G+ GYILLVS KTKELIGTLKMNG  RSLAF DDG QLLSSG 
Sbjct: 357  SLEAFEVSPDSGTIAFVGNEGYILLVSSKTKELIGTLKMNGTVRSLAFADDGRQLLSSGG 416

Query: 1237 DGHIYHWDLRTRTCFHKAVDEGCIKGSALGTSPNGAL 1347
            DGHIYHWDLRTRTCFHK  DEGCI G+AL  SP+GAL
Sbjct: 417  DGHIYHWDLRTRTCFHKGTDEGCINGTALCASPSGAL 453


>emb|CBI17936.3| unnamed protein product [Vitis vinifera]
          Length = 591

 Score =  482 bits (1240), Expect = e-133
 Identities = 263/452 (58%), Positives = 308/452 (68%), Gaps = 4/452 (0%)
 Frame = +1

Query: 4    MDFISQNALQRKQVNEPKVEDINKPLLLEEVEATEDAKDC--SLVNLXXXXXXXXXXXXX 177
            M  ISQN L++ +VN+ K ED++ P  LE  E  ED K+    ++               
Sbjct: 38   MSLISQNILRKNRVNKTKREDVDVPSPLEGNE-NEDRKELVPDILRTKKRKKEHKEEDKQ 96

Query: 178  XXXXXXXXXXRHENFVFGSFYSQSEFGK--EEETKNMFNEGPALFFTDRSASGVVTVYED 351
                      + ENF+FGS Y   EFGK  EEE +    +   LFFTDRSA+  ++ YE+
Sbjct: 97   LEVEEEREMKKLENFLFGSLYDPVEFGKVGEEEVQTKAEKDSTLFFTDRSANSALSFYEE 156

Query: 352  EAEYQEEDNAEVEIRDRQPAWVDXXXXXXGNTNANIAKKHRLKKLRTKEDEGSIALSDYG 531
            +AE+ EE + E + + R+P WVD        TN NI+K +RL+KLR +EDE  I+ S Y 
Sbjct: 157  DAEFPEESSGEEDTKQRKPVWVDEEEE---KTNINISKVNRLRKLRKEEDESLISGSVYV 213

Query: 532  SRLRAQHVNLNHGTEWAQLGSKKRNXXXXXXXXXXXXNNVYEDNQDNDSILRTNEDLVVK 711
            SRLRAQH  LN GTEWAQL S  R                ++D +  D ILRTNEDLVVK
Sbjct: 214  SRLRAQHAKLNPGTEWAQLDSWSRTYSSDYG---------HKDVEAVDDILRTNEDLVVK 264

Query: 712  SDTKLLPGLLEYTRLVDANAQDPSNGPINSVQFHRNXXXXXXXXXXXXXXFFQIDGKRNT 891
            S TKLLPGLLEY+RLVDANA+DPSNGPINSVQFH N              FFQIDG+RNT
Sbjct: 265  SGTKLLPGLLEYSRLVDANAEDPSNGPINSVQFHCNAQLLLTAGLDRRVRFFQIDGRRNT 324

Query: 892  MMQSIFLEDCPIYKASFLPDGSQVIVGGRRKFFYSFDLVKAQFDRIGPLTGRDEKSLESF 1071
             +QSIFLEDCPI KASFLPDGSQVI+ GRRKFFYSFDLVKA+ D+IGPL GR+EKSLE+F
Sbjct: 325  KIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSFDLVKAKVDKIGPLIGREEKSLEAF 384

Query: 1072 EISPDSRTIAFLGHGGYILLVSCKTKELIGTLKMNGNARSLAFNDDGTQLLSSGDDGHIY 1251
            E+SPDS TIAF+G+ GYILLVS KTKELIGTLKMNG  RSLAF DDG QLLSSG DGHIY
Sbjct: 385  EVSPDSGTIAFVGNEGYILLVSSKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDGHIY 444

Query: 1252 HWDLRTRTCFHKAVDEGCIKGSALGTSPNGAL 1347
            HWDLRTRTCFHK  DEGCI G+AL  SP+GAL
Sbjct: 445  HWDLRTRTCFHKGTDEGCINGTALCASPSGAL 476


>ref|XP_002520985.1| nucleotide binding protein, putative [Ricinus communis]
            gi|223539822|gb|EEF41402.1| nucleotide binding protein,
            putative [Ricinus communis]
          Length = 566

 Score =  450 bits (1157), Expect = e-124
 Identities = 245/455 (53%), Positives = 293/455 (64%), Gaps = 7/455 (1%)
 Frame = +1

Query: 4    MDFISQNALQRKQVNEPKVEDINKPLLLEEVEATEDAKDCSLVNLXXXXXXXXXXXXXXX 183
            M  ISQN   + +V   K E      +    E  ED +D  L  +               
Sbjct: 1    MSLISQNVGSKNRVKTKKEETDGPAFMEGNEENNEDGRDSELA-MSRAKKRRREKEEQLE 59

Query: 184  XXXXXXXXRHENFVFGSFYSQSEFGKEEETK--NMFNEGPALFFTDRSASGVVTVYEDEA 357
                    R ENF+FGS YS  EFG +EE K  +    G ALFF DRSAS  + VY++E+
Sbjct: 60   VDEGKEMKRLENFLFGSLYSPIEFGNDEEEKAHDEVENGSALFFVDRSASTELCVYKEES 119

Query: 358  EYQEEDNAEVEIRDRQPAWVDXXXXXXGNTNANIAKKHRLKKLRTKEDEGSIALSDYGSR 537
            E  E+ + + E R R+P WVD        T  +IA  +RL+KLR ++ E  I+  +Y +R
Sbjct: 120  EVLEKSDVDEEPRQRKPVWVDEEE---AKTTIDIAHTNRLRKLRKEDSENLISGREYVAR 176

Query: 538  LRAQHVNLNHGTEWAQLGSKKRNXXXXXXXXXXXXNNV-----YEDNQDNDSILRTNEDL 702
            LRA H  LN GTEWA+L  + RN            N +     YE  +  D + RTNEDL
Sbjct: 177  LRAHHAKLNPGTEWARLDLQSRNNGSYDDESSDEENGIVTARGYEVAETFDDVFRTNEDL 236

Query: 703  VVKSDTKLLPGLLEYTRLVDANAQDPSNGPINSVQFHRNXXXXXXXXXXXXXXFFQIDGK 882
            VVKS  KLLPG+LEY+RLVDANAQ+ SNGPINSVQFHRN              FFQIDGK
Sbjct: 237  VVKSRKKLLPGILEYSRLVDANAQEASNGPINSVQFHRNAQLLLAAGLDRRLRFFQIDGK 296

Query: 883  RNTMMQSIFLEDCPIYKASFLPDGSQVIVGGRRKFFYSFDLVKAQFDRIGPLTGRDEKSL 1062
            RNT +QSIF++DCPI KASFLPDGSQVI+ GRRKFFYSFDLV A+ D+IGPL GR+EKSL
Sbjct: 297  RNTKIQSIFIDDCPIRKASFLPDGSQVIIAGRRKFFYSFDLVNAKVDKIGPLVGREEKSL 356

Query: 1063 ESFEISPDSRTIAFLGHGGYILLVSCKTKELIGTLKMNGNARSLAFNDDGTQLLSSGDDG 1242
            E FE+SPDS TIAF+G+ GYILLVS KTKELIGTLKMNG AR+LAF+ +G QLLS G DG
Sbjct: 357  EFFEVSPDSSTIAFVGNEGYILLVSSKTKELIGTLKMNGTARALAFSGNGQQLLSHGGDG 416

Query: 1243 HIYHWDLRTRTCFHKAVDEGCIKGSALGTSPNGAL 1347
             +YHWDLRTRTC HKAVDEGCI G+AL  SPNG+L
Sbjct: 417  QVYHWDLRTRTCIHKAVDEGCINGTALSASPNGSL 451


>ref|XP_004149687.1| PREDICTED: U3 small nucleolar RNA-associated protein 18 homolog
            [Cucumis sativus] gi|449521663|ref|XP_004167849.1|
            PREDICTED: U3 small nucleolar RNA-associated protein 18
            homolog [Cucumis sativus]
          Length = 564

 Score =  441 bits (1134), Expect = e-121
 Identities = 236/381 (61%), Positives = 272/381 (71%), Gaps = 5/381 (1%)
 Frame = +1

Query: 214  ENFVFGSFYSQSEFGKEEETKNMFN---EGPALFFTDRSASGVVTVYEDEAEYQEEDNAE 384
            ENF+FGS YS  EFGK+EE +N FN   + PAL+  DRSA   ++ YED+    +E   +
Sbjct: 72   ENFLFGSLYSPVEFGKDEE-QNGFNSEEKTPALYIMDRSADHSLSAYEDDYGLLDESTNK 130

Query: 385  VEIRDRQPAWVDXXXXXXGNTNANIAKKHRLKKLRTKEDEGSIALSDYGSRLRAQHVNLN 564
             E + R+P WVD           NI    RL+KLR +E E SI+ S+Y SRLRAQH  +N
Sbjct: 131  EEHQQRKPVWVDEEEE---KATVNITNVSRLRKLRKEEHENSISGSEYVSRLRAQHAKIN 187

Query: 565  HGTEWAQLGSKKR--NXXXXXXXXXXXXNNVYEDNQDNDSILRTNEDLVVKSDTKLLPGL 738
             GTEWAQL ++ R  +               Y++    D ILRT+E LVVKS  KL+PGL
Sbjct: 188  PGTEWAQLDAQSRGDDDLSSDDENAVALAGGYDNVDSIDDILRTSEKLVVKSGGKLMPGL 247

Query: 739  LEYTRLVDANAQDPSNGPINSVQFHRNXXXXXXXXXXXXXXFFQIDGKRNTMMQSIFLED 918
            L Y+RLVDANA++PSNGPINSVQFHRN              FFQIDGKRNT +QSIFLED
Sbjct: 248  LGYSRLVDANAEEPSNGPINSVQFHRNSQLLLATGLDRKLRFFQIDGKRNTKIQSIFLED 307

Query: 919  CPIYKASFLPDGSQVIVGGRRKFFYSFDLVKAQFDRIGPLTGRDEKSLESFEISPDSRTI 1098
            CPI KASFLPDGSQVI+ GRRKFFYS DLVKA+ D+IGPL GR+EKSLE+FEISPDS TI
Sbjct: 308  CPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSLEAFEISPDSSTI 367

Query: 1099 AFLGHGGYILLVSCKTKELIGTLKMNGNARSLAFNDDGTQLLSSGDDGHIYHWDLRTRTC 1278
            AF+G+ GYILLVS KTKELIGTLKMNG  RSLAF DDG QLLSSG DG IYHWDLRTRTC
Sbjct: 368  AFMGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDGQIYHWDLRTRTC 427

Query: 1279 FHKAVDEGCIKGSALGTSPNG 1341
             HKAVDEGCI G+AL TSPNG
Sbjct: 428  IHKAVDEGCINGTALCTSPNG 448