BLASTX nr result

ID: Cimicifuga21_contig00003542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003542
         (633 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310916.1| precursor of transferase serine hydroxymethy...   409   e-112
gb|ABO61377.1| mitochondrial serine hydroxymethyltransferase [Po...   409   e-112
gb|ABK96362.1| unknown [Populus trichocarpa x Populus deltoides]      409   e-112
sp|P34899.1|GLYM_PEA RecName: Full=Serine hydroxymethyltransfera...   408   e-112
ref|XP_002527346.1| serine hydroxymethyltransferase, putative [R...   407   e-112

>ref|XP_002310916.1| precursor of transferase serine hydroxymethyltransferase 2 [Populus
           trichocarpa] gi|222850736|gb|EEE88283.1| precursor of
           transferase serine hydroxymethyltransferase 2 [Populus
           trichocarpa]
          Length = 518

 Score =  409 bits (1052), Expect = e-112
 Identities = 200/210 (95%), Positives = 209/210 (99%)
 Frame = -3

Query: 631 AETLCQKRALEAFRLDPAKWGVNVQSLSGSPSNFQVYTALLKPHERIMALDLPHGGHLSH 452
           AE+LCQKRALEAFRLDPAKWGVNVQSLSGSPSNFQVYTALLKPHERIMALDLPHGGHLSH
Sbjct: 123 AESLCQKRALEAFRLDPAKWGVNVQSLSGSPSNFQVYTALLKPHERIMALDLPHGGHLSH 182

Query: 451 GYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDY 272
           GYQTDTKKISAVSIFFETMPYRL+ESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDY
Sbjct: 183 GYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDY 242

Query: 271 ARIRKVCDKQKSILLADMAHISGLVAAGVIPSPFEYADIVTTTTHKSLRGPRGAMIFFRK 92
           ARIRKVCDKQK+ILLADMAHISGLVAAGVIPSPFEYAD+VTTTTHKSLRGPRGAMIFFRK
Sbjct: 243 ARIRKVCDKQKAILLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRK 302

Query: 91  GLKEVNKKGEQIMYDFEDKINQAVFPGLQG 2
           GLKEVNK+G+++ YD+EDKINQAVFPGLQG
Sbjct: 303 GLKEVNKQGKEVFYDYEDKINQAVFPGLQG 332


>gb|ABO61377.1| mitochondrial serine hydroxymethyltransferase [Populus tremuloides]
          Length = 520

 Score =  409 bits (1052), Expect = e-112
 Identities = 200/210 (95%), Positives = 209/210 (99%)
 Frame = -3

Query: 631 AETLCQKRALEAFRLDPAKWGVNVQSLSGSPSNFQVYTALLKPHERIMALDLPHGGHLSH 452
           AE+LCQKRALEAFRLDPAKWGVNVQSLSGSPSNFQVYTALLKPHERIMALDLPHGGHLSH
Sbjct: 125 AESLCQKRALEAFRLDPAKWGVNVQSLSGSPSNFQVYTALLKPHERIMALDLPHGGHLSH 184

Query: 451 GYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDY 272
           GYQTDTKKISAVSIFFETMPYRL+ESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDY
Sbjct: 185 GYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDY 244

Query: 271 ARIRKVCDKQKSILLADMAHISGLVAAGVIPSPFEYADIVTTTTHKSLRGPRGAMIFFRK 92
           ARIRKVCDKQK+ILLADMAHISGLVAAGVIPSPFEYAD+VTTTTHKSLRGPRGAMIFFRK
Sbjct: 245 ARIRKVCDKQKAILLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRK 304

Query: 91  GLKEVNKKGEQIMYDFEDKINQAVFPGLQG 2
           GLKEVNK+G+++ YD+EDKINQAVFPGLQG
Sbjct: 305 GLKEVNKQGKEVFYDYEDKINQAVFPGLQG 334


>gb|ABK96362.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 520

 Score =  409 bits (1052), Expect = e-112
 Identities = 200/210 (95%), Positives = 209/210 (99%)
 Frame = -3

Query: 631 AETLCQKRALEAFRLDPAKWGVNVQSLSGSPSNFQVYTALLKPHERIMALDLPHGGHLSH 452
           AE+LCQKRALEAFRLDPAKWGVNVQSLSGSPSNFQVYTALLKPHERIMALDLPHGGHLSH
Sbjct: 125 AESLCQKRALEAFRLDPAKWGVNVQSLSGSPSNFQVYTALLKPHERIMALDLPHGGHLSH 184

Query: 451 GYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDY 272
           GYQTDTKKISAVSIFFETMPYRL+ESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDY
Sbjct: 185 GYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDY 244

Query: 271 ARIRKVCDKQKSILLADMAHISGLVAAGVIPSPFEYADIVTTTTHKSLRGPRGAMIFFRK 92
           ARIRKVCDKQK+ILLADMAHISGLVAAGVIPSPFEYAD+VTTTTHKSLRGPRGAMIFFRK
Sbjct: 245 ARIRKVCDKQKAILLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRK 304

Query: 91  GLKEVNKKGEQIMYDFEDKINQAVFPGLQG 2
           GLKEVNK+G+++ YD+EDKINQAVFPGLQG
Sbjct: 305 GLKEVNKQGKEVFYDYEDKINQAVFPGLQG 334


>sp|P34899.1|GLYM_PEA RecName: Full=Serine hydroxymethyltransferase, mitochondrial;
           Short=SHMT; AltName: Full=Glycine
           hydroxymethyltransferase; AltName: Full=Serine
           methylase; Flags: Precursor gi|169158|gb|AAA33687.1|
           serine hydroxymethyltransferase [Pisum sativum]
          Length = 518

 Score =  408 bits (1049), Expect = e-112
 Identities = 198/210 (94%), Positives = 208/210 (99%)
 Frame = -3

Query: 631 AETLCQKRALEAFRLDPAKWGVNVQSLSGSPSNFQVYTALLKPHERIMALDLPHGGHLSH 452
           AETLCQKRALEAFRLDPAKWGVNVQ LSGSPSNFQVYTALLKPH+RIMALDLPHGGHLSH
Sbjct: 122 AETLCQKRALEAFRLDPAKWGVNVQPLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSH 181

Query: 451 GYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDY 272
           GYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDY
Sbjct: 182 GYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDY 241

Query: 271 ARIRKVCDKQKSILLADMAHISGLVAAGVIPSPFEYADIVTTTTHKSLRGPRGAMIFFRK 92
           ARIRKVCDKQK++LLADMAHISGLVAAGVIPSPF+YAD+VTTTTHKSLRGPRGAMIFFRK
Sbjct: 242 ARIRKVCDKQKAVLLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFFRK 301

Query: 91  GLKEVNKKGEQIMYDFEDKINQAVFPGLQG 2
           GLKEVNK+G+++ YD+EDKINQAVFPGLQG
Sbjct: 302 GLKEVNKQGKEVFYDYEDKINQAVFPGLQG 331


>ref|XP_002527346.1| serine hydroxymethyltransferase, putative [Ricinus communis]
           gi|223533265|gb|EEF35018.1| serine
           hydroxymethyltransferase, putative [Ricinus communis]
          Length = 513

 Score =  407 bits (1046), Expect = e-112
 Identities = 197/210 (93%), Positives = 208/210 (99%)
 Frame = -3

Query: 631 AETLCQKRALEAFRLDPAKWGVNVQSLSGSPSNFQVYTALLKPHERIMALDLPHGGHLSH 452
           AETLCQKRALEAF+LDP KWGVNVQSLSGSP+NFQVYTALLKPHERIMALDLPHGGHLSH
Sbjct: 118 AETLCQKRALEAFQLDPEKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSH 177

Query: 451 GYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDY 272
           GYQTDTKKISAVSIFFETMPYRLDE+TGYIDY+QLEKSATLFRPKLIVAGASAYARLYDY
Sbjct: 178 GYQTDTKKISAVSIFFETMPYRLDENTGYIDYEQLEKSATLFRPKLIVAGASAYARLYDY 237

Query: 271 ARIRKVCDKQKSILLADMAHISGLVAAGVIPSPFEYADIVTTTTHKSLRGPRGAMIFFRK 92
           ARIRKVCDKQK+++LADMAHISGLVAAGVIPSPFEYADIVTTTTHKSLRGPRGAMIFFRK
Sbjct: 238 ARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADIVTTTTHKSLRGPRGAMIFFRK 297

Query: 91  GLKEVNKKGEQIMYDFEDKINQAVFPGLQG 2
           G+KE+NKKGE++ YDFEDKINQAVFPGLQG
Sbjct: 298 GVKEINKKGEEVKYDFEDKINQAVFPGLQG 327


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