BLASTX nr result

ID: Cimicifuga21_contig00003536 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003536
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634755.1| PREDICTED: ABC transporter C family member 3...   102   2e-20
emb|CBI39701.3| unnamed protein product [Vitis vinifera]              102   2e-20
ref|XP_003634753.1| PREDICTED: ABC transporter C family member 3...   101   5e-20
ref|XP_003634754.1| PREDICTED: ABC transporter C family member 3...   100   9e-20
emb|CBI39703.3| unnamed protein product [Vitis vinifera]               99   5e-19

>ref|XP_003634755.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1488

 Score =  102 bits (255), Expect = 2e-20
 Identities = 55/135 (40%), Positives = 76/135 (56%), Gaps = 8/135 (5%)
 Frame = +1

Query: 82  NENRPLSLYHKPTVFSCMVLSICHLLLCVVNYYFY--TVWSQDKIVTQLDLVLTTLAWLA 255
           N  R   LY+K T   C  LS+ +LLLC +NY+++    WS +++VT LDLVL TLAW A
Sbjct: 47  NCKRTRFLYYKQTFACCQGLSLLNLLLCFLNYFYWYRNGWSDERLVTLLDLVLRTLAWGA 106

Query: 256 ISAYLYY----SRPLKFPIFLRIWWVFFFIMSCYCLVSDL--NHHFVPTHLWIKDVLSFV 417
           +  YL+     S   KFP  LR+WW F+F +SCY LV D+   H  +     + D++  +
Sbjct: 107 VCVYLHTQFIGSVEPKFPFLLRVWWGFYFSISCYFLVLDIVKKHQSLRIQYLVPDIVYVI 166

Query: 418 MGFIFLYFGVFGKKQ 462
            G    Y G  GK Q
Sbjct: 167 TGLFLCYSGFLGKNQ 181


>emb|CBI39701.3| unnamed protein product [Vitis vinifera]
          Length = 1355

 Score =  102 bits (255), Expect = 2e-20
 Identities = 55/135 (40%), Positives = 76/135 (56%), Gaps = 8/135 (5%)
 Frame = +1

Query: 82  NENRPLSLYHKPTVFSCMVLSICHLLLCVVNYYFY--TVWSQDKIVTQLDLVLTTLAWLA 255
           N  R   LY+K T   C  LS+ +LLLC +NY+++    WS +++VT LDLVL TLAW A
Sbjct: 53  NCKRTRFLYYKQTFACCQGLSLLNLLLCFLNYFYWYRNGWSDERLVTLLDLVLRTLAWGA 112

Query: 256 ISAYLYY----SRPLKFPIFLRIWWVFFFIMSCYCLVSDL--NHHFVPTHLWIKDVLSFV 417
           +  YL+     S   KFP  LR+WW F+F +SCY LV D+   H  +     + D++  +
Sbjct: 113 VCVYLHTQFIGSVEPKFPFLLRVWWGFYFSISCYFLVLDIVKKHQSLRIQYLVPDIVYVI 172

Query: 418 MGFIFLYFGVFGKKQ 462
            G    Y G  GK Q
Sbjct: 173 TGLFLCYSGFLGKNQ 187


>ref|XP_003634753.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1488

 Score =  101 bits (252), Expect = 5e-20
 Identities = 53/135 (39%), Positives = 74/135 (54%), Gaps = 8/135 (5%)
 Frame = +1

Query: 82  NENRPLSLYHKPTVFSCMVLSICHLLLCVVNYYFY--TVWSQDKIVTQLDLVLTTLAWLA 255
           N  R   LY+K T   C  LS+ +  LC +NY+++    WS +K+VT LDLVL TL+W A
Sbjct: 47  NYKRTRFLYYKQTFACCQGLSLLNFFLCFLNYFYWYRNGWSGEKLVTLLDLVLRTLSWGA 106

Query: 256 ISAYLYY----SRPLKFPIFLRIWWVFFFIMSCYCLVSDL--NHHFVPTHLWIKDVLSFV 417
           +S YL+     S   KFP  LR+WW F+F +SCYCLV D+      +     + D++  +
Sbjct: 107 VSVYLHTQFHGSVEPKFPFLLRVWWGFYFSISCYCLVIDIVKKDQSLQVQFLVPDIVYVI 166

Query: 418 MGFIFLYFGVFGKKQ 462
            G    Y G  G  Q
Sbjct: 167 TGLFLCYSGFLGNNQ 181


>ref|XP_003634754.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 2021

 Score =  100 bits (250), Expect = 9e-20
 Identities = 53/135 (39%), Positives = 74/135 (54%), Gaps = 8/135 (5%)
 Frame = +1

Query: 82  NENRPLSLYHKPTVFSCMVLSICHLLLCVVNYYFY--TVWSQDKIVTQLDLVLTTLAWLA 255
           N  R   LY+K T   C  LS+ +  LC +NY+++    WS +K+VT LDLVL TL+W A
Sbjct: 47  NCKRTRFLYYKQTFACCQGLSLLNFFLCFLNYFYWYRNGWSGEKLVTLLDLVLRTLSWGA 106

Query: 256 ISAYLYY----SRPLKFPIFLRIWWVFFFIMSCYCLVSDL--NHHFVPTHLWIKDVLSFV 417
           +  YL+     S   KFP  LR+WW F+F +SCYCLV D+      +     + D++  +
Sbjct: 107 VCVYLHTQFHGSVEPKFPFLLRVWWGFYFSISCYCLVIDIVKKDQSLQVQFLVPDIVYVI 166

Query: 418 MGFIFLYFGVFGKKQ 462
            G    Y G  GK Q
Sbjct: 167 TGLFLCYSGFLGKNQ 181



 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 43/107 (40%), Positives = 58/107 (54%), Gaps = 6/107 (5%)
 Frame = +1

Query: 160  LCVVNYYFYTVWSQDKIVTQLDLVLTTLAWLAISAYLYY----SRPLKFPIFLRIWWVFF 327
            LC  +      WS +++VT LDLVL TLAW A+  YL+     S   KFP  LR+WW F+
Sbjct: 1020 LCAPSDSAQNGWSDERLVTLLDLVLRTLAWGAVCVYLHTQFIGSVEPKFPFLLRVWWGFY 1079

Query: 328  FIMSCYCLVSDL--NHHFVPTHLWIKDVLSFVMGFIFLYFGVFGKKQ 462
            F +SCYCLV D+   H  +     + D++  + G    Y G  GK Q
Sbjct: 1080 FSISCYCLVLDIVKRHQSLRIQYLVPDIVYVITGLFLCYSGFLGKNQ 1126


>emb|CBI39703.3| unnamed protein product [Vitis vinifera]
          Length = 217

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 54/139 (38%), Positives = 75/139 (53%), Gaps = 8/139 (5%)
 Frame = +1

Query: 70  LNNANENRPLSLYHKPTVFSCMVLSICHLLLCVVNYYFY--TVWSQDKIVTQLDLVLTTL 243
           L N    R LS  +K T      LS+ +  LC +NY+++    WS +K+VT LDLVL TL
Sbjct: 51  LENCKSTRSLS--YKQTFACSQGLSLLNFFLCFLNYFYWYRNGWSDEKLVTLLDLVLRTL 108

Query: 244 AWLAISAYLYY----SRPLKFPIFLRIWWVFFFIMSCYCLVSDL--NHHFVPTHLWIKDV 405
           AW A+  YL+     S   KFP  LR+WW F+F +SCYCLV D+   H  +     + D+
Sbjct: 109 AWGAVCVYLHTQFHGSVEPKFPFLLRVWWGFYFSISCYCLVIDIVKKHQSLTIQFLVPDI 168

Query: 406 LSFVMGFIFLYFGVFGKKQ 462
           +  + G    + G  GK Q
Sbjct: 169 VYVITGMFLCHSGFLGKNQ 187


Top