BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003532
         (1438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003630940.1| Ubiquitin fusion degradation protein [Medica...   238   1e-95
ref|XP_002313007.1| predicted protein [Populus trichocarpa] gi|2...   232   2e-92
gb|ABK95938.1| unknown [Populus trichocarpa]                          232   9e-92
gb|ACF06576.1| ubiquitin fusion degradation protein [Elaeis guin...   229   9e-92
ref|XP_004170084.1| PREDICTED: ubiquitin fusion degradation prot...   229   2e-91

>ref|XP_003630940.1| Ubiquitin fusion degradation protein [Medicago truncatula]
           gi|355524962|gb|AET05416.1| Ubiquitin fusion degradation
           protein [Medicago truncatula]
          Length = 320

 Score =  238 bits (608), Expect(2) = 1e-95
 Identities = 136/223 (60%), Positives = 144/223 (64%), Gaps = 2/223 (0%)
 Frame = -1

Query: 961 VKVKNATLPKGKYVKLQPHTKDFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYI 782
           V+VKN TLPKG YVKLQPHTKDFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYI
Sbjct: 100 VRVKNVTLPKGTYVKLQPHTKDFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYI 159

Query: 781 DIVETKPSNGISIIETDCEVDFAPPLDYKXXXXXXXXXXXXXXXXXXAQDAQAEAEPKFS 602
           DIVE+KP+N ISIIETDCEVDFAPPLDYK                   ++A AE EPKF+
Sbjct: 160 DIVESKPANAISIIETDCEVDFAPPLDYK-EPERPVAPRSAGKAPEADKEAPAETEPKFN 218

Query: 601 PFTGSGRRLDGKPSNNQPPLVSSIGVKDKRPV--XXXXXXXXXXXXXXXXXXXXGKLVFG 428
           PFTGSGRRLDGKP N QPP VSS G KDK P                       GKLVFG
Sbjct: 219 PFTGSGRRLDGKPLNYQPPPVSSSGSKDKNPAAQNVNSQPSTASSSQSNAPQTQGKLVFG 278

Query: 427 SNSSHNAKETKKVAXXXXXXXXXXXXXXXXXQAFTGKGYSLKG 299
           SN  +  KET K                   Q FTGK YSL+G
Sbjct: 279 SN-PNRGKETGKATEAKAKQEPPKEKEEDKFQPFTGKKYSLRG 320



 Score =  139 bits (350), Expect(2) = 1e-95
 Identities = 65/68 (95%), Positives = 67/68 (98%)
 Frame = -2

Query: 1200 MFFEGYGYHGTSFEQTYRCYPASFIDKPQLESGDKIIMPPSALDRLASLHIDYPMLFELR 1021
            MFF+GYGYHGTSFEQTYRCYPASFI+KPQLESGDKIIMPPSALDRLASLHIDYPMLFELR
Sbjct: 1    MFFDGYGYHGTSFEQTYRCYPASFIEKPQLESGDKIIMPPSALDRLASLHIDYPMLFELR 60

Query: 1020 NAATERVS 997
            NAA ERVS
Sbjct: 61   NAAAERVS 68


>ref|XP_002313007.1| predicted protein [Populus trichocarpa] gi|222849415|gb|EEE86962.1|
           predicted protein [Populus trichocarpa]
          Length = 323

 Score =  232 bits (592), Expect(2) = 2e-92
 Identities = 134/225 (59%), Positives = 148/225 (65%), Gaps = 4/225 (1%)
 Frame = -1

Query: 961 VKVKNATLPKGKYVKLQPHTKDFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYI 782
           V+VKN TLPKGKYVKLQPHTKDFLDISNPKAILETTLRN+SCLTTGDSIMVAYNNKKYYI
Sbjct: 100 VRVKNVTLPKGKYVKLQPHTKDFLDISNPKAILETTLRNYSCLTTGDSIMVAYNNKKYYI 159

Query: 781 DIVETKPSNGISIIETDCEVDFAPPLDYKXXXXXXXXXXXXXXXXXXAQDAQAEAEPKFS 602
           DI+ETKPSN ISIIETDCEVDFAPPLDYK                  A++  AE EPKF+
Sbjct: 160 DIIETKPSNAISIIETDCEVDFAPPLDYK-EPEKPVASVPPSKATSQAEEVPAETEPKFN 218

Query: 601 PFTGSGRRLDGKPSNNQ-PPLVSSIGVKDKRP--VXXXXXXXXXXXXXXXXXXXXGKLVF 431
           PFTG+GRRLDGKP + Q PP +SS   KDK+P                       GKLVF
Sbjct: 219 PFTGAGRRLDGKPLSYQPPPALSSSVSKDKQPAVADGSRQPSLGSSSQNTARKSQGKLVF 278

Query: 430 GSNSSHNAKET-KKVAXXXXXXXXXXXXXXXXXQAFTGKGYSLKG 299
           GSN+    KET ++ +                 QAFTGK YSLKG
Sbjct: 279 GSNTGRTPKETQREESGKETKQEQPEKKEEPKFQAFTGKKYSLKG 323



 Score =  134 bits (338), Expect(2) = 2e-92
 Identities = 62/68 (91%), Positives = 66/68 (97%)
 Frame = -2

Query: 1200 MFFEGYGYHGTSFEQTYRCYPASFIDKPQLESGDKIIMPPSALDRLASLHIDYPMLFELR 1021
            MFF+GYGYHGTSFEQTYRCYPASFI+KPQ+ESGDKIIMPPSALDRLASLHIDYPMLFEL+
Sbjct: 1    MFFDGYGYHGTSFEQTYRCYPASFIEKPQIESGDKIIMPPSALDRLASLHIDYPMLFELQ 60

Query: 1020 NAATERVS 997
            N A ERVS
Sbjct: 61   NDAAERVS 68


>gb|ABK95938.1| unknown [Populus trichocarpa]
          Length = 324

 Score =  232 bits (592), Expect(2) = 9e-92
 Identities = 134/225 (59%), Positives = 148/225 (65%), Gaps = 4/225 (1%)
 Frame = -1

Query: 961 VKVKNATLPKGKYVKLQPHTKDFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYI 782
           V+VKN TLPKGKYVKLQPHTKDFLDISNPKAILETTLRN+SCLTTGDSIMVAYNNKKYYI
Sbjct: 101 VRVKNVTLPKGKYVKLQPHTKDFLDISNPKAILETTLRNYSCLTTGDSIMVAYNNKKYYI 160

Query: 781 DIVETKPSNGISIIETDCEVDFAPPLDYKXXXXXXXXXXXXXXXXXXAQDAQAEAEPKFS 602
           DI+ETKPSN ISIIETDCEVDFAPPLDYK                  A++  AE EPKF+
Sbjct: 161 DIIETKPSNAISIIETDCEVDFAPPLDYK-EPEKPVASVPPSKATSQAEEVPAETEPKFN 219

Query: 601 PFTGSGRRLDGKPSNNQ-PPLVSSIGVKDKRP--VXXXXXXXXXXXXXXXXXXXXGKLVF 431
           PFTG+GRRLDGKP + Q PP +SS   KDK+P                       GKLVF
Sbjct: 220 PFTGAGRRLDGKPLSYQPPPALSSSVSKDKQPAVADGSRQPSLGSSSQNTARKSQGKLVF 279

Query: 430 GSNSSHNAKET-KKVAXXXXXXXXXXXXXXXXXQAFTGKGYSLKG 299
           GSN+    KET ++ +                 QAFTGK YSLKG
Sbjct: 280 GSNTGRTPKETQREESGKETKQEQPEKKEEPKFQAFTGKKYSLKG 324



 Score =  132 bits (333), Expect(2) = 9e-92
 Identities = 61/67 (91%), Positives = 65/67 (97%)
 Frame = -2

Query: 1197 FFEGYGYHGTSFEQTYRCYPASFIDKPQLESGDKIIMPPSALDRLASLHIDYPMLFELRN 1018
            FF+GYGYHGTSFEQTYRCYPASFI+KPQ+ESGDKIIMPPSALDRLASLHIDYPMLFEL+N
Sbjct: 3    FFDGYGYHGTSFEQTYRCYPASFIEKPQIESGDKIIMPPSALDRLASLHIDYPMLFELQN 62

Query: 1017 AATERVS 997
             A ERVS
Sbjct: 63   DAAERVS 69


>gb|ACF06576.1| ubiquitin fusion degradation protein [Elaeis guineensis]
          Length = 320

 Score =  229 bits (583), Expect(2) = 9e-92
 Identities = 133/223 (59%), Positives = 144/223 (64%), Gaps = 2/223 (0%)
 Frame = -1

Query: 961 VKVKNATLPKGKYVKLQPHTKDFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYI 782
           V+VKNATLPKG YVKLQPHTKDFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYI
Sbjct: 102 VRVKNATLPKGTYVKLQPHTKDFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYI 161

Query: 781 DIVETKPSNGISIIETDCEVDFAPPLDYKXXXXXXXXXXXXXXXXXXAQDAQAEA--EPK 608
           DIVETKPS+ ISIIETDCEVDFAPPLDYK                   +DAQAEA  EPK
Sbjct: 162 DIVETKPSSAISIIETDCEVDFAPPLDYK-EPERPQPSIPTSKAPVPVEDAQAEAEVEPK 220

Query: 607 FSPFTGSGRRLDGKPSNNQPPLVSSIGVKDKRPVXXXXXXXXXXXXXXXXXXXXGKLVFG 428
           F+PFTG GRRLDGKP  +Q P VSS     +                       GKLVFG
Sbjct: 221 FTPFTGIGRRLDGKPLKHQAPTVSSSAKGQQSETTNGVKKTASTSESSSSRQTKGKLVFG 280

Query: 427 SNSSHNAKETKKVAXXXXXXXXXXXXXXXXXQAFTGKGYSLKG 299
           SN++  +KE + +                  QAFTGK YSLKG
Sbjct: 281 SNANRASKEAQVL---KQTKEEPAKKEEPKFQAFTGKKYSLKG 320



 Score =  136 bits (342), Expect(2) = 9e-92
 Identities = 63/67 (94%), Positives = 66/67 (98%)
 Frame = -2

Query: 1197 FFEGYGYHGTSFEQTYRCYPASFIDKPQLESGDKIIMPPSALDRLASLHIDYPMLFELRN 1018
            FF+G+GYHG SFEQTYRCYPASFIDKPQLESGDKIIMPPSALDRLASLHIDYPMLFELRN
Sbjct: 4    FFDGFGYHGNSFEQTYRCYPASFIDKPQLESGDKIIMPPSALDRLASLHIDYPMLFELRN 63

Query: 1017 AATERVS 997
            +ATERVS
Sbjct: 64   SATERVS 70


>ref|XP_004170084.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Cucumis
           sativus]
          Length = 321

 Score =  229 bits (584), Expect(2) = 2e-91
 Identities = 131/223 (58%), Positives = 141/223 (63%), Gaps = 2/223 (0%)
 Frame = -1

Query: 961 VKVKNATLPKGKYVKLQPHTKDFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYI 782
           V+VKN TLPKG YVKLQPHTKDFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYI
Sbjct: 100 VRVKNVTLPKGTYVKLQPHTKDFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYI 159

Query: 781 DIVETKPSNGISIIETDCEVDFAPPLDYKXXXXXXXXXXXXXXXXXXAQDAQAEAEPKFS 602
           DI+ETKPSN ISIIETDCEVDFAPPLDYK                   ++  AEAEPKF+
Sbjct: 160 DIIETKPSNAISIIETDCEVDFAPPLDYK-EPEKPVPSLPTGKAPVQDEEPPAEAEPKFN 218

Query: 601 PFTGSGRRLDGKPSNNQPPLVSSIGVKDKR--PVXXXXXXXXXXXXXXXXXXXXGKLVFG 428
           PFTG+GRRLDGKPS  Q PL  +   KDK+                        GKLVFG
Sbjct: 219 PFTGAGRRLDGKPSMQQAPLSWTSISKDKQVDTRTVTGQPSAGSTSRNASRQSEGKLVFG 278

Query: 427 SNSSHNAKETKKVAXXXXXXXXXXXXXXXXXQAFTGKGYSLKG 299
            N+S   KETKK                   Q F GK YSL+G
Sbjct: 279 GNASRTPKETKKEGEKDGKQEQTKEKEEAKFQPFGGKKYSLRG 321



 Score =  135 bits (339), Expect(2) = 2e-91
 Identities = 62/68 (91%), Positives = 66/68 (97%)
 Frame = -2

Query: 1200 MFFEGYGYHGTSFEQTYRCYPASFIDKPQLESGDKIIMPPSALDRLASLHIDYPMLFELR 1021
            MFF+GYGYHGTSFEQTYRCYPASFI+KPQLE+GDKIIMPPSALDRLASLHIDYPMLFELR
Sbjct: 1    MFFDGYGYHGTSFEQTYRCYPASFIEKPQLETGDKIIMPPSALDRLASLHIDYPMLFELR 60

Query: 1020 NAATERVS 997
            N  TER+S
Sbjct: 61   NDVTERLS 68