BLASTX nr result

ID: Cimicifuga21_contig00003525 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003525
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277982.2| PREDICTED: protein TIME FOR COFFEE-like [Vit...    87   2e-18
ref|XP_002272732.2| PREDICTED: protein TIME FOR COFFEE-like [Vit...    85   7e-15
emb|CAN70427.1| hypothetical protein VITISV_004537 [Vitis vinifera]    85   7e-15
ref|XP_002302111.1| predicted protein [Populus trichocarpa] gi|2...    74   3e-13
ref|XP_002520735.1| ATP binding protein, putative [Ricinus commu...    78   8e-13

>ref|XP_002277982.2| PREDICTED: protein TIME FOR COFFEE-like [Vitis vinifera]
          Length = 1587

 Score = 87.0 bits (214), Expect(2) = 2e-18
 Identities = 50/102 (49%), Positives = 57/102 (55%), Gaps = 5/102 (4%)
 Frame = -1

Query: 437  ENVYNHNFAMPMHPKSFXXXXXXXXXXXXS---RNHGERXXXXXQS--LKGGAELIPTRA 273
            +NVY  NFAMP+HP +F            S    NHGE+     Q   LK G E + ++A
Sbjct: 990  QNVYGQNFAMPLHPSNFALVAPPASLGSASGTSANHGEKKQQQPQQHGLKAGVESLQSQA 1049

Query: 272  FAMPFTSFNGGAAVSALDFSSMTQNHLIFQSLPVTTRHGYQI 147
            FAM FTS NG AA   LD SSM QNH I QSLP   RHGY I
Sbjct: 1050 FAMSFTSINGAAAAPGLDISSMAQNHAILQSLPEAARHGYII 1091



 Score = 30.0 bits (66), Expect(2) = 2e-18
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = -3

Query: 126  RATEKSPPDYGRREDSDSNNVDDERQTAAGKGQQSVAQAIVF 1
            RATE+     G     DS++V++ER+  AGK   +  Q+I F
Sbjct: 1104 RATEEGKSGIG-----DSSSVEEERKALAGKAAATAGQSIAF 1140


>ref|XP_002272732.2| PREDICTED: protein TIME FOR COFFEE-like [Vitis vinifera]
          Length = 1299

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 47/100 (47%), Positives = 58/100 (58%), Gaps = 3/100 (3%)
 Frame = -1

Query: 437  ENVYNHNFAMPMHPKSFXXXXXXXXXXXXSRNHGERXXXXXQS---LKGGAELIPTRAFA 267
            +NVY  NFA+P+ P +F              N GE+          LKGG ELIP++AFA
Sbjct: 918  KNVYGQNFAVPVPPVNFALMPSATLAGGG--NPGEKQPQHQSQQQGLKGGVELIPSQAFA 975

Query: 266  MPFTSFNGGAAVSALDFSSMTQNHLIFQSLPVTTRHGYQI 147
            M F SFNG    S ++FSSM QN +IFQSLP   RHGYQ+
Sbjct: 976  MSFASFNGSNTASGINFSSMAQNPVIFQSLPDMVRHGYQV 1015


>emb|CAN70427.1| hypothetical protein VITISV_004537 [Vitis vinifera]
          Length = 1631

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 49/100 (49%), Positives = 60/100 (60%), Gaps = 3/100 (3%)
 Frame = -1

Query: 437  ENVYNHNFAMPMHPKSFXXXXXXXXXXXXSRNHGERXXXXXQS---LKGGAELIPTRAFA 267
            +NVY  NFA+P+ P +F              N GE+          LKGG ELIP++AFA
Sbjct: 1129 KNVYGQNFAVPVPPVNFALMPSATLXGGG--NPGEKQXQHQSQQQGLKGGVELIPSQAFA 1186

Query: 266  MPFTSFNGGAAVSALDFSSMTQNHLIFQSLPVTTRHGYQI 147
            M F SFNG    S ++FSSM QN +IFQSLP   RHGYQ+
Sbjct: 1187 MSFASFNGSNTASGINFSSMAQNPVIFQSLPDMVRHGYQV 1226


>ref|XP_002302111.1| predicted protein [Populus trichocarpa] gi|222843837|gb|EEE81384.1|
            predicted protein [Populus trichocarpa]
          Length = 1262

 Score = 73.9 bits (180), Expect(2) = 3e-13
 Identities = 45/102 (44%), Positives = 57/102 (55%), Gaps = 5/102 (4%)
 Frame = -1

Query: 437  ENVYNHNFAMPMHPKSFXXXXXXXXXXXXSRNHGERXXXXXQ-----SLKGGAELIPTRA 273
            ++V+  NF +P+ P               S NHGE+     Q     +LKGG ELIP++A
Sbjct: 884  KSVHGPNFMVPVQPN---FGLMASTTVGGSGNHGEKQQQQHQLSQEKNLKGGVELIPSQA 940

Query: 272  FAMPFTSFNGGAAVSALDFSSMTQNHLIFQSLPVTTRHGYQI 147
            FAM F SFNG    S L+FS+MTQN  I QS P  TR GYQ+
Sbjct: 941  FAMSFASFNGSKTASNLNFSAMTQNPPILQSFPDMTRQGYQV 982



 Score = 25.4 bits (54), Expect(2) = 3e-13
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = -3

Query: 132  AGRATEKS--PPDYGRREDSDSNNVDDERQTAAGKGQQSVAQAIVF 1
            A +AT+K    P  G+   S S N DD ++  +GK  +   Q +VF
Sbjct: 985  AAQATQKKNHQPSEGKSGGS-STNPDDGKKAPSGKSTRGNGQTLVF 1029


>ref|XP_002520735.1| ATP binding protein, putative [Ricinus communis]
            gi|223540120|gb|EEF41697.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 1161

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 43/97 (44%), Positives = 58/97 (59%)
 Frame = -1

Query: 437  ENVYNHNFAMPMHPKSFXXXXXXXXXXXXSRNHGERXXXXXQSLKGGAELIPTRAFAMPF 258
            ++V+  +F +P+ P               SRN GE+     +SLKGG E+IP++AFA+ F
Sbjct: 785  KSVHGQSFMLPLQPN---FALMPSITVGGSRNCGEKQQPQEKSLKGGVEIIPSQAFALSF 841

Query: 257  TSFNGGAAVSALDFSSMTQNHLIFQSLPVTTRHGYQI 147
             SFNGG A   L+FS+M QN  IFQSLP  T  GYQ+
Sbjct: 842  ASFNGGNAPLNLNFSAMAQNPTIFQSLPDMTPQGYQV 878


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