BLASTX nr result

ID: Cimicifuga21_contig00003520 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003520
         (1364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329431.1| predicted protein [Populus trichocarpa] gi|1...   464   e-128
ref|XP_002524859.1| ribosomal protein L5, putative [Ricinus comm...   459   e-126
emb|CBI24704.3| unnamed protein product [Vitis vinifera]              456   e-126
ref|XP_003548576.1| PREDICTED: 60S ribosomal protein L5-like [Gl...   455   e-125
gb|ACJ85054.1| unknown [Medicago truncatula]                          454   e-125

>ref|XP_002329431.1| predicted protein [Populus trichocarpa] gi|118486443|gb|ABK95061.1|
           unknown [Populus trichocarpa]
           gi|222870481|gb|EEF07612.1| predicted protein [Populus
           trichocarpa]
          Length = 297

 Score =  464 bits (1195), Expect = e-128
 Identities = 226/283 (79%), Positives = 248/283 (87%)
 Frame = +3

Query: 132 MVFVKSQKSRAYFKRYQVKFRRRRAGKTDYRARIRLINQDKNKYGTPKYRFVVRFTNKDV 311
           M F K+QKSRAYFKRYQVKF+RRRAGKTDYRARIRLINQDKNKY TPKYRFVVRFTNKD+
Sbjct: 1   MAFAKAQKSRAYFKRYQVKFKRRRAGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60

Query: 312 IAQIVSASIAGDMILASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKQLEMDEEYE 491
           IAQI SASIAGD++LASAYAHELPRYGLE GLTNYAAAYCTGLLLARRVLK LEMD+EYE
Sbjct: 61  IAQIASASIAGDIVLASAYAHELPRYGLEAGLTNYAAAYCTGLLLARRVLKMLEMDDEYE 120

Query: 492 GNVEATGEDFSIEPTETRRPFRALLDVGLIRTTTGNRVFXXXXXXXXXXXXIPHSEKRFA 671
           GNVEATGEDFS+EP ++RRPFRALLDVGL+RTTTGNRVF            IPHS+KRFA
Sbjct: 121 GNVEATGEDFSVEPADSRRPFRALLDVGLLRTTTGNRVFGALKGALDGGLDIPHSDKRFA 180

Query: 672 GFKKEDKQLDAEVHRKYVYGGHVAAYMKTLMEDEPEKYQTHFCXXXXXXXXXXXXXXLYK 851
           GF K++KQLDAEVHRKY+YGGHVAAYM+TLMEDEPEKYQ+HF               LYK
Sbjct: 181 GFAKDNKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFSEYLKRGIDADGMEALYK 240

Query: 852 KVHAAIRADPTAKKSEKEPPKQHKRFNLKKLTYDERKSKLIER 980
           KVHAAIRADPTAKKSEK+PPK+HKR+NLKKLTY+ERK+KL+ER
Sbjct: 241 KVHAAIRADPTAKKSEKQPPKEHKRYNLKKLTYEERKAKLVER 283


>ref|XP_002524859.1| ribosomal protein L5, putative [Ricinus communis]
           gi|223535822|gb|EEF37483.1| ribosomal protein L5,
           putative [Ricinus communis]
          Length = 299

 Score =  459 bits (1180), Expect = e-126
 Identities = 223/283 (78%), Positives = 246/283 (86%)
 Frame = +3

Query: 132 MVFVKSQKSRAYFKRYQVKFRRRRAGKTDYRARIRLINQDKNKYGTPKYRFVVRFTNKDV 311
           M FVK+QK++AYFKRYQVKF+RRRAGKTDYRARIRLINQDKNKY TPKYRFVVRFTNKD+
Sbjct: 1   MAFVKAQKTKAYFKRYQVKFKRRRAGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60

Query: 312 IAQIVSASIAGDMILASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKQLEMDEEYE 491
           +AQIVSASIAGD++LA+AYAHELP YGL+VGLTNYAAAYCTGLLLARR LK LEMDEEY+
Sbjct: 61  VAQIVSASIAGDIVLAAAYAHELPHYGLDVGLTNYAAAYCTGLLLARRTLKMLEMDEEYQ 120

Query: 492 GNVEATGEDFSIEPTETRRPFRALLDVGLIRTTTGNRVFXXXXXXXXXXXXIPHSEKRFA 671
           GNVEATGEDFS+EP +TRRPFRALLDVGLIRTTTGNRVF            IPHSEKRFA
Sbjct: 121 GNVEATGEDFSVEPADTRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSEKRFA 180

Query: 672 GFKKEDKQLDAEVHRKYVYGGHVAAYMKTLMEDEPEKYQTHFCXXXXXXXXXXXXXXLYK 851
           GF K+ KQLD+EVHRKY+YGGHVAAYM TLMEDEPEKYQ+HF               LYK
Sbjct: 181 GFSKDGKQLDSEVHRKYIYGGHVAAYMNTLMEDEPEKYQSHFSKYIKSGVEADDIEALYK 240

Query: 852 KVHAAIRADPTAKKSEKEPPKQHKRFNLKKLTYDERKSKLIER 980
           KVHAAIRADP+ KKSEK+PPK+HKR+NLKKLTY+ERK+KLIER
Sbjct: 241 KVHAAIRADPSPKKSEKQPPKEHKRYNLKKLTYEERKAKLIER 283


>emb|CBI24704.3| unnamed protein product [Vitis vinifera]
          Length = 333

 Score =  456 bits (1173), Expect = e-126
 Identities = 225/301 (74%), Positives = 252/301 (83%)
 Frame = +3

Query: 78  LLFPQLNSSCRRADRESTMVFVKSQKSRAYFKRYQVKFRRRRAGKTDYRARIRLINQDKN 257
           L+ P L+    R  R S MVFVK+QKS+AYFKRYQVKF+RRR GKTDYRARIRLINQDKN
Sbjct: 15  LICPLLSLLEGRGSRASAMVFVKAQKSKAYFKRYQVKFKRRREGKTDYRARIRLINQDKN 74

Query: 258 KYGTPKYRFVVRFTNKDVIAQIVSASIAGDMILASAYAHELPRYGLEVGLTNYAAAYCTG 437
           KY TPKYRFVVRFTNKD+IAQI SASIAGD++LASAY+HELP YGLEVGLTNYAAAYCTG
Sbjct: 75  KYNTPKYRFVVRFTNKDIIAQITSASIAGDIVLASAYSHELPHYGLEVGLTNYAAAYCTG 134

Query: 438 LLLARRVLKQLEMDEEYEGNVEATGEDFSIEPTETRRPFRALLDVGLIRTTTGNRVFXXX 617
           LLLARRVLK LEMD EYEGNVEATGED+S+EPT++RRPFRALLDVGL+RTTTGNRVF   
Sbjct: 135 LLLARRVLKMLEMDGEYEGNVEATGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGAL 194

Query: 618 XXXXXXXXXIPHSEKRFAGFKKEDKQLDAEVHRKYVYGGHVAAYMKTLMEDEPEKYQTHF 797
                    IPHS+KRFAGF K+ KQLDAEVHRKY+YGGHV+AYM TL+EDEPEKYQ+HF
Sbjct: 195 KGALDGGLDIPHSDKRFAGFSKDSKQLDAEVHRKYIYGGHVSAYMGTLIEDEPEKYQSHF 254

Query: 798 CXXXXXXXXXXXXXXLYKKVHAAIRADPTAKKSEKEPPKQHKRFNLKKLTYDERKSKLIE 977
                          +YKKVHAAIRA+P  KK EK+PPK+HKR+NLKKLTY+ERK+KLIE
Sbjct: 255 SEYIKKGVEPDDIEEMYKKVHAAIRANPIQKKVEKQPPKEHKRYNLKKLTYEERKAKLIE 314

Query: 978 R 980
           R
Sbjct: 315 R 315


>ref|XP_003548576.1| PREDICTED: 60S ribosomal protein L5-like [Glycine max]
          Length = 298

 Score =  455 bits (1170), Expect = e-125
 Identities = 223/283 (78%), Positives = 246/283 (86%)
 Frame = +3

Query: 132 MVFVKSQKSRAYFKRYQVKFRRRRAGKTDYRARIRLINQDKNKYGTPKYRFVVRFTNKDV 311
           MV+VKSQKS+AYFKRYQVKF+RRR GKTDYRARIRLINQDKNKY TPKYRFVVRF+NKD+
Sbjct: 1   MVYVKSQKSKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFSNKDI 60

Query: 312 IAQIVSASIAGDMILASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKQLEMDEEYE 491
           +AQI+SASIAGD++LA+AYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLK LEMDEEYE
Sbjct: 61  VAQIISASIAGDIVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKTLEMDEEYE 120

Query: 492 GNVEATGEDFSIEPTETRRPFRALLDVGLIRTTTGNRVFXXXXXXXXXXXXIPHSEKRFA 671
           GNVEATGED+S+EP E+RRPFRALLDVGLIRTTTGNRVF            IPHS+KRFA
Sbjct: 121 GNVEATGEDYSVEPAESRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFA 180

Query: 672 GFKKEDKQLDAEVHRKYVYGGHVAAYMKTLMEDEPEKYQTHFCXXXXXXXXXXXXXXLYK 851
           GF KE K+LDAEVHRKYV+GGHVAAYMK L EDEPEKYQ+HF               LYK
Sbjct: 181 GFDKEKKELDAEVHRKYVFGGHVAAYMKILAEDEPEKYQSHFSEYIKRGIEADGIEALYK 240

Query: 852 KVHAAIRADPTAKKSEKEPPKQHKRFNLKKLTYDERKSKLIER 980
           KVHAAIRADP+ KKSEK+PPK+HKR+NLKKLTY+ERK+KLI R
Sbjct: 241 KVHAAIRADPSLKKSEKQPPKEHKRYNLKKLTYEERKAKLIAR 283


>gb|ACJ85054.1| unknown [Medicago truncatula]
          Length = 302

 Score =  454 bits (1167), Expect = e-125
 Identities = 219/283 (77%), Positives = 247/283 (87%)
 Frame = +3

Query: 132 MVFVKSQKSRAYFKRYQVKFRRRRAGKTDYRARIRLINQDKNKYGTPKYRFVVRFTNKDV 311
           MV+VK+QKS+AYFKRYQVKF+RRR GKTDYRARIRLINQDKNKY TPKYRFVVRFTNKD+
Sbjct: 1   MVYVKAQKSKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60

Query: 312 IAQIVSASIAGDMILASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKQLEMDEEYE 491
           +AQIVSASIAGD++LA+AY+HELP +GL+VGLTNYAAAYCTGLLLARRVLK LEMDEEYE
Sbjct: 61  VAQIVSASIAGDIVLAAAYSHELPHFGLKVGLTNYAAAYCTGLLLARRVLKTLEMDEEYE 120

Query: 492 GNVEATGEDFSIEPTETRRPFRALLDVGLIRTTTGNRVFXXXXXXXXXXXXIPHSEKRFA 671
           GNVEATGED+S+EP E+RRPFRALLDVGL++TTTGNRVF            IPHS+KRFA
Sbjct: 121 GNVEATGEDYSVEPAESRRPFRALLDVGLVKTTTGNRVFGALKGALDGGLDIPHSDKRFA 180

Query: 672 GFKKEDKQLDAEVHRKYVYGGHVAAYMKTLMEDEPEKYQTHFCXXXXXXXXXXXXXXLYK 851
           GF KE K+LDAEVHRKY++GGHV+AYMKTL+EDEPEKYQTHF               LYK
Sbjct: 181 GFDKEKKELDAEVHRKYIFGGHVSAYMKTLIEDEPEKYQTHFSEYIKKGIEADGLEELYK 240

Query: 852 KVHAAIRADPTAKKSEKEPPKQHKRFNLKKLTYDERKSKLIER 980
           KVHAAIRADPT KKSEK+PPKQHKR+NLKKLTY+ERK+KL+ R
Sbjct: 241 KVHAAIRADPTIKKSEKQPPKQHKRYNLKKLTYEERKAKLVSR 283


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