BLASTX nr result

ID: Cimicifuga21_contig00003509 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003509
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280687.1| PREDICTED: photosystem I reaction center sub...   130   1e-28
emb|CAN77761.1| hypothetical protein VITISV_038784 [Vitis vinifera]   129   2e-28
gb|AFK39849.1| unknown [Lotus japonicus] gi|388506620|gb|AFK4137...   128   6e-28
gb|AAL32043.1|AF439284_1 photosystem I subunit X precursor [Reta...   122   2e-26
ref|NP_001238000.1| uncharacterized protein LOC100527056 [Glycin...   122   3e-26

>ref|XP_002280687.1| PREDICTED: photosystem I reaction center subunit psaK,
           chloroplastic [Vitis vinifera]
           gi|297740792|emb|CBI30974.3| unnamed protein product
           [Vitis vinifera]
          Length = 129

 Score =  130 bits (326), Expect = 1e-28
 Identities = 64/79 (81%), Positives = 73/79 (92%)
 Frame = +3

Query: 117 ASPVMTSLPQFSGLRPQASTARVGSLAVVQPSRRRGNGALGARCDFIGSPTNLIMVTSTT 296
           A+ VMT+LPQF+GLRP++ST+ V +LA VQP RR+G GALGARCDFIGSPTNLIMVTST+
Sbjct: 2   ATTVMTTLPQFNGLRPKSSTSPVQTLAAVQPMRRKGKGALGARCDFIGSPTNLIMVTSTS 61

Query: 297 LMLFAGRFGLAPSANRKAT 353
           LMLFAGRFGLAPSANRKAT
Sbjct: 62  LMLFAGRFGLAPSANRKAT 80


>emb|CAN77761.1| hypothetical protein VITISV_038784 [Vitis vinifera]
          Length = 129

 Score =  129 bits (325), Expect = 2e-28
 Identities = 64/79 (81%), Positives = 73/79 (92%)
 Frame = +3

Query: 117 ASPVMTSLPQFSGLRPQASTARVGSLAVVQPSRRRGNGALGARCDFIGSPTNLIMVTSTT 296
           A+ VMT+LPQF+GLRP++ST+ V +LA VQP RR+G GALGARCDFIGSPTNLIMVTST+
Sbjct: 2   ATTVMTTLPQFNGLRPKSSTSPVQTLAAVQPMRRKGXGALGARCDFIGSPTNLIMVTSTS 61

Query: 297 LMLFAGRFGLAPSANRKAT 353
           LMLFAGRFGLAPSANRKAT
Sbjct: 62  LMLFAGRFGLAPSANRKAT 80


>gb|AFK39849.1| unknown [Lotus japonicus] gi|388506620|gb|AFK41376.1| unknown
           [Lotus japonicus]
          Length = 129

 Score =  128 bits (321), Expect = 6e-28
 Identities = 64/79 (81%), Positives = 69/79 (87%)
 Frame = +3

Query: 117 ASPVMTSLPQFSGLRPQASTARVGSLAVVQPSRRRGNGALGARCDFIGSPTNLIMVTSTT 296
           A+ VMT+LPQFSGLRP+ S   V +L  VQP RR+GNGALGARCDFIGSPTNLIMV STT
Sbjct: 2   ATTVMTTLPQFSGLRPKFSATPVQNLVTVQPMRRKGNGALGARCDFIGSPTNLIMVASTT 61

Query: 297 LMLFAGRFGLAPSANRKAT 353
           LMLFAGRFGLAPSANRKAT
Sbjct: 62  LMLFAGRFGLAPSANRKAT 80


>gb|AAL32043.1|AF439284_1 photosystem I subunit X precursor [Retama raetam]
          Length = 104

 Score =  122 bits (307), Expect = 2e-26
 Identities = 61/79 (77%), Positives = 69/79 (87%)
 Frame = +3

Query: 117 ASPVMTSLPQFSGLRPQASTARVGSLAVVQPSRRRGNGALGARCDFIGSPTNLIMVTSTT 296
           A+ VMT+LPQFSGLRP+ S A + +L  VQP RR+G GALGARCDFIGSPTNLI+V ST+
Sbjct: 2   ATSVMTTLPQFSGLRPKFSPAPLQNLVAVQPMRRKGKGALGARCDFIGSPTNLIIVASTS 61

Query: 297 LMLFAGRFGLAPSANRKAT 353
           LMLFAGRFGLAPSANRKAT
Sbjct: 62  LMLFAGRFGLAPSANRKAT 80


>ref|NP_001238000.1| uncharacterized protein LOC100527056 [Glycine max]
           gi|255631458|gb|ACU16096.1| unknown [Glycine max]
          Length = 161

 Score =  122 bits (306), Expect = 3e-26
 Identities = 62/79 (78%), Positives = 67/79 (84%)
 Frame = +3

Query: 117 ASPVMTSLPQFSGLRPQASTARVGSLAVVQPSRRRGNGALGARCDFIGSPTNLIMVTSTT 296
           A+ VMT+LPQFSGLRPQ S A V +L  VQP  R+G GALGARCD+IGS TNLIMV STT
Sbjct: 2   ATTVMTTLPQFSGLRPQFSAAPVKNLVAVQPMSRKGKGALGARCDYIGSSTNLIMVASTT 61

Query: 297 LMLFAGRFGLAPSANRKAT 353
           LMLFAGRFGLAPSANRKAT
Sbjct: 62  LMLFAGRFGLAPSANRKAT 80


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