BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003496
         (949 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27170.3| unnamed protein product [Vitis vinifera]              220   3e-57
ref|XP_002332139.1| predicted protein [Populus trichocarpa] gi|2...   216   6e-56
gb|ABK95033.1| unknown [Populus trichocarpa]                          213   3e-55
ref|XP_003607876.1| F-box protein PP2-B10 [Medicago truncatula] ...   213   9e-55
gb|AFK41435.1| unknown [Lotus japonicus]                              214   1e-54

>emb|CBI27170.3| unnamed protein product [Vitis vinifera]
          Length = 239

 Score =  220 bits (561), Expect(2) = 3e-57
 Identities = 108/220 (49%), Positives = 148/220 (67%), Gaps = 1/220 (0%)
 Frame = +3

Query: 18  MGQAPSQNKVTESKNIEGASESVLQTPKTIEVRAEPKPKPTPK-LPYNYENIVKDADSPI 194
           MG + SQ++ ++     G + S     +T+++  + K     K LPYNY  I+KDADSPI
Sbjct: 1   MGSSWSQDESSQLSEKPGETLS-----QTLDINTKAKETIQAKQLPYNYAAIMKDADSPI 55

Query: 195 KFSSIEELYDHLHSGVFLNQKKQKYWIEKESGLNCFMVYARDLSITWAEEKNYWEWSQLN 374
             SSIE+L D L++GV LN  ++K+W+EK+   NCFM++AR+LSITWAE+  YW W ++ 
Sbjct: 56  NESSIEKLNDQLYAGVLLNGNRKKFWMEKKFN-NCFMIFARNLSITWAEDSRYWHWLKIK 114

Query: 375 ETSXXXXXXXXXXXXCWLEVHGTFDTSKLSPKTMYEILFVVMLNDLAYGWEVPVNIRLTL 554
           ETS            CWLEVHG F+T+KLSP  MY++ FVVM+ D AYGW VPVN++L L
Sbjct: 115 ETSDVFVDVAELINVCWLEVHGKFETAKLSPGIMYKVAFVVMMKDPAYGWGVPVNLKLAL 174

Query: 555 PGGETKQHKEMLLTKPKAQWIELEVGEFYTSPDKMGEVPF 674
           P G T++HKE L  KPK QWIE+ VG+F TS + +GE+ F
Sbjct: 175 PDGNTQEHKENLREKPKGQWIEIPVGQFQTSAENIGEIEF 214



 Score = 28.9 bits (63), Expect(2) = 3e-57
 Identities = 9/15 (60%), Positives = 15/15 (100%)
 Frame = +2

Query: 698 WKNGLIIKGLIIRPR 742
           WK+GL++KG+II+P+
Sbjct: 224 WKSGLVVKGVIIQPK 238


>ref|XP_002332139.1| predicted protein [Populus trichocarpa] gi|222875189|gb|EEF12320.1|
           predicted protein [Populus trichocarpa]
          Length = 280

 Score =  216 bits (549), Expect(2) = 6e-56
 Identities = 102/216 (47%), Positives = 144/216 (66%), Gaps = 7/216 (3%)
 Frame = +3

Query: 48  TESKNIEGASES---VLQTPKTIEVR----AEPKPKPTPKLPYNYENIVKDADSPIKFSS 206
           T+ K +E A E+   V++  K  +V+    A+ K     KLP+N E I++DADSP+  SS
Sbjct: 40  TKLKTVEKAPEAKPLVIRQEKAADVKPLHDAKAKTVKEVKLPHNCEAILRDADSPVDRSS 99

Query: 207 IEELYDHLHSGVFLNQKKQKYWIEKESGLNCFMVYARDLSITWAEEKNYWEWSQLNETSX 386
           +++LYD L +GVFLNQK++KYW+EK+   NCFM++A+DLSITW  +  YW+W  + E+  
Sbjct: 100 VDKLYDQLSTGVFLNQKRKKYWVEKKCYRNCFMLFAKDLSITWGGDARYWKWPSICESGD 159

Query: 387 XXXXXXXXXXXCWLEVHGTFDTSKLSPKTMYEILFVVMLNDLAYGWEVPVNIRLTLPGGE 566
                      CWLE++G F+T  LSP  +YE++FV+ L D AYGW VPVN+ L LP G 
Sbjct: 160 VTVDVAELLDVCWLEIYGKFNTKMLSPGILYEVVFVIKLKDPAYGWGVPVNVSLVLPNGY 219

Query: 567 TKQHKEMLLTKPKAQWIELEVGEFYTSPDKMGEVPF 674
            ++ KE L TKP+ QWIE+ VGEF TSP+ +GE+ F
Sbjct: 220 KQERKEKLQTKPREQWIEVPVGEFITSPENVGEIQF 255



 Score = 28.9 bits (63), Expect(2) = 6e-56
 Identities = 10/15 (66%), Positives = 13/15 (86%)
 Frame = +2

Query: 698 WKNGLIIKGLIIRPR 742
           WK GL+IKG+ IRP+
Sbjct: 265 WKRGLVIKGIAIRPK 279


>gb|ABK95033.1| unknown [Populus trichocarpa]
          Length = 280

 Score =  213 bits (543), Expect(2) = 3e-55
 Identities = 101/216 (46%), Positives = 143/216 (66%), Gaps = 7/216 (3%)
 Frame = +3

Query: 48  TESKNIEGASES---VLQTPKTIEVR----AEPKPKPTPKLPYNYENIVKDADSPIKFSS 206
           T+ K +E A E+   V++  K  +V+    A+ K     KLP+N E I++DADSP+  SS
Sbjct: 40  TKLKTVEKAPEAKPLVIRQEKAADVKPLHDAKAKTVKEVKLPHNCEAILRDADSPVDRSS 99

Query: 207 IEELYDHLHSGVFLNQKKQKYWIEKESGLNCFMVYARDLSITWAEEKNYWEWSQLNETSX 386
           +++LYD L +GVFLNQK++KYW+EK+   NCFM++A+DLSITW  +  YW+W  + E+  
Sbjct: 100 VDKLYDQLSTGVFLNQKRKKYWVEKKCYRNCFMLFAKDLSITWGGDTRYWKWPSICESGD 159

Query: 387 XXXXXXXXXXXCWLEVHGTFDTSKLSPKTMYEILFVVMLNDLAYGWEVPVNIRLTLPGGE 566
                      CWLE++G F+T  LSP  +YE++FV+ L D AYGW VPVN+ L LP G 
Sbjct: 160 VTVDVAELLDVCWLEIYGKFNTKMLSPGILYEVVFVIKLKDPAYGWGVPVNVSLVLPNGY 219

Query: 567 TKQHKEMLLTKPKAQWIELEVGEFYTSPDKMGEVPF 674
            ++ KE L TKP+ QWIE+ VGE  TSP+ +GE+ F
Sbjct: 220 KQERKEKLQTKPREQWIEVPVGELITSPENVGEIQF 255



 Score = 28.9 bits (63), Expect(2) = 3e-55
 Identities = 10/15 (66%), Positives = 13/15 (86%)
 Frame = +2

Query: 698 WKNGLIIKGLIIRPR 742
           WK GL+IKG+ IRP+
Sbjct: 265 WKRGLVIKGIAIRPK 279


>ref|XP_003607876.1| F-box protein PP2-B10 [Medicago truncatula]
           gi|355508931|gb|AES90073.1| F-box protein PP2-B10
           [Medicago truncatula] gi|388501714|gb|AFK38923.1|
           unknown [Medicago truncatula]
          Length = 293

 Score =  213 bits (541), Expect(2) = 9e-55
 Identities = 102/215 (47%), Positives = 139/215 (64%)
 Frame = +3

Query: 24  QAPSQNKVTESKNIEGASESVLQTPKTIEVRAEPKPKPTPKLPYNYENIVKDADSPIKFS 203
           ++PS  K  ++  +    E+   T   I+  +         L +NYE+I+KDADSP+  S
Sbjct: 59  KSPSSKKAVQNSTVVKCDETQSATKPLIKELS---------LSHNYEHILKDADSPVDKS 109

Query: 204 SIEELYDHLHSGVFLNQKKQKYWIEKESGLNCFMVYARDLSITWAEEKNYWEWSQLNETS 383
           S E++ D L++GVFL+ K +KYW+EK S  NCFM+YAR LSITWAE+ NYW+W Q  + S
Sbjct: 110 SREKMCDQLYAGVFLHHKTKKYWVEKNSKANCFMLYARALSITWAEDPNYWKWIQQKDVS 169

Query: 384 XXXXXXXXXXXXCWLEVHGTFDTSKLSPKTMYEILFVVMLNDLAYGWEVPVNIRLTLPGG 563
                       CWLEVHG FDT KLSP  +Y++ F++ML D A GWE+PVN+RL LPGG
Sbjct: 170 EGTTEVAELKRVCWLEVHGKFDTRKLSPGILYQVSFIIMLKDPAQGWELPVNVRLVLPGG 229

Query: 564 ETKQHKEMLLTKPKAQWIELEVGEFYTSPDKMGEV 668
           + +QHKE L+ K +A+WIE+ VGEF  S    GE+
Sbjct: 230 KKQQHKENLMEKLRARWIEVPVGEFVVSEKDGGEM 264



 Score = 28.1 bits (61), Expect(2) = 9e-55
 Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = +2

Query: 659 GRSAIFLFKNDKA-WKNGLIIKGLIIRPR 742
           G   I +F+ +   WK GL+IKG+ I+P+
Sbjct: 262 GEMEISMFEYEGGMWKQGLVIKGIAIKPK 290


>gb|AFK41435.1| unknown [Lotus japonicus]
          Length = 314

 Score =  214 bits (544), Expect(2) = 1e-54
 Identities = 104/201 (51%), Positives = 133/201 (66%), Gaps = 1/201 (0%)
 Frame = +3

Query: 126 KPKPTPKLPYNYENIVKDADSPIKFSSIEELYDHLHSGVFLNQKKQKYWIEKESGLNCFM 305
           KP+     P+NYE+I+K ADSPI  SS E+L D L++GVFL+ K +KYW+E+ S  NCFM
Sbjct: 107 KPRKELNFPHNYEHILKGADSPIDKSSREKLCDQLYAGVFLDHKTKKYWLERNSNSNCFM 166

Query: 306 VYARDLSITWAEEKNYWEWSQLNETSXXXXXXXXXXXXCWLEVHGTFDTSKLSPKTMYEI 485
           +YAR LSITWAE++NYW+W   N+ S            CWLEVHG FDT KLSP  +Y +
Sbjct: 167 LYARALSITWAEDQNYWKWVPQNDESGTMIEVAELNRVCWLEVHGKFDTRKLSPGILYNV 226

Query: 486 LFVVMLNDLAYGWEVPVNIRLTLPGGETKQHKEMLLTKPKAQWIELEVGEFYTSPDKMGE 665
            F+VML D A GWE+PVN+RL LPGG+ +QH E L+ K +A+WIE+ VGEF  S    GE
Sbjct: 227 SFIVMLKDPAQGWEIPVNVRLVLPGGKKQQHNENLMDKLRARWIEIPVGEFVASEKDGGE 286

Query: 666 VPF-FYSRTTRHGKMVLLSKG 725
           +    Y       KM L+ KG
Sbjct: 287 MEISMYEYEGGMWKMGLVIKG 307



 Score = 26.6 bits (57), Expect(2) = 1e-54
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = +2

Query: 698 WKNGLIIKGLIIRPR 742
           WK GL+IKG+ I+P+
Sbjct: 299 WKMGLVIKGISIKPK 313