BLASTX nr result

ID: Cimicifuga21_contig00003475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003475
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK92961.1| unknown [Populus trichocarpa]                           90   2e-16
emb|CBI20604.3| unnamed protein product [Vitis vinifera]               87   1e-15
ref|XP_002275926.1| PREDICTED: zinc finger CCCH domain-containin...    87   1e-15
emb|CAN83255.1| hypothetical protein VITISV_036981 [Vitis vinifera]    87   1e-15
ref|XP_002309525.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15

>gb|ABK92961.1| unknown [Populus trichocarpa]
          Length = 384

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 50/91 (54%), Positives = 60/91 (65%), Gaps = 1/91 (1%)
 Frame = -1

Query: 398 SSLRPAFNSLPSTPTQPL-TRSGIGKLNFWDSVESLEEEPVMDRVESGKELRAKIYEKLS 222
           SSLRP F SLPSTPT+ + TRSG+G+L+ W    + EEEP M+RVESG++LRAKIY KLS
Sbjct: 298 SSLRPGFCSLPSTPTRTMVTRSGLGQLDIWGDSSTCEEEPAMERVESGRDLRAKIYAKLS 357

Query: 221 KENSFNRXXXXXXXXXXXXXXXXDWVSELVK 129
           KENS +                  WVSELVK
Sbjct: 358 KENSLD----PDRVESAVSGPDVGWVSELVK 384


>emb|CBI20604.3| unnamed protein product [Vitis vinifera]
          Length = 306

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 48/90 (53%), Positives = 60/90 (66%)
 Frame = -1

Query: 398 SSLRPAFNSLPSTPTQPLTRSGIGKLNFWDSVESLEEEPVMDRVESGKELRAKIYEKLSK 219
           S+LRP F SLPSTPT+   RSG+G L+ WD  ++ EEEP M+RVESG++LRA+IY K+SK
Sbjct: 226 STLRPGFCSLPSTPTRTPARSGLGGLDVWD--KTCEEEPAMERVESGRDLRARIYAKISK 283

Query: 218 ENSFNRXXXXXXXXXXXXXXXXDWVSELVK 129
           ENS +R                 WVSELVK
Sbjct: 284 ENSLDR-------DSSPSAPDFGWVSELVK 306


>ref|XP_002275926.1| PREDICTED: zinc finger CCCH domain-containing protein 20 [Vitis
           vinifera]
          Length = 379

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 48/90 (53%), Positives = 60/90 (66%)
 Frame = -1

Query: 398 SSLRPAFNSLPSTPTQPLTRSGIGKLNFWDSVESLEEEPVMDRVESGKELRAKIYEKLSK 219
           S+LRP F SLPSTPT+   RSG+G L+ WD  ++ EEEP M+RVESG++LRA+IY K+SK
Sbjct: 299 STLRPGFCSLPSTPTRTPARSGLGGLDVWD--KTCEEEPAMERVESGRDLRARIYAKISK 356

Query: 218 ENSFNRXXXXXXXXXXXXXXXXDWVSELVK 129
           ENS +R                 WVSELVK
Sbjct: 357 ENSLDR-------DSSPSAPDFGWVSELVK 379


>emb|CAN83255.1| hypothetical protein VITISV_036981 [Vitis vinifera]
          Length = 426

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 48/90 (53%), Positives = 60/90 (66%)
 Frame = -1

Query: 398 SSLRPAFNSLPSTPTQPLTRSGIGKLNFWDSVESLEEEPVMDRVESGKELRAKIYEKLSK 219
           S+LRP F SLPSTPT+   RSG+G L+ WD  ++ EEEP M+RVESG++LRA+IY K+SK
Sbjct: 346 STLRPGFCSLPSTPTRTPARSGLGGLDVWD--KTCEEEPAMERVESGRDLRARIYAKISK 403

Query: 218 ENSFNRXXXXXXXXXXXXXXXXDWVSELVK 129
           ENS +R                 WVSELVK
Sbjct: 404 ENSLDR-------DSSPSAPDFGWVSELVK 426


>ref|XP_002309525.1| predicted protein [Populus trichocarpa] gi|222855501|gb|EEE93048.1|
           predicted protein [Populus trichocarpa]
          Length = 390

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 49/91 (53%), Positives = 60/91 (65%), Gaps = 1/91 (1%)
 Frame = -1

Query: 398 SSLRPAFNSLPSTPTQPL-TRSGIGKLNFWDSVESLEEEPVMDRVESGKELRAKIYEKLS 222
           SSLRP F SLPSTPT+ + +RSG+ +L+ W    + EEEP M+RVESG++LRAKIY KLS
Sbjct: 304 SSLRPGFCSLPSTPTRTMASRSGLSQLDIWGDGVTCEEEPAMERVESGRDLRAKIYAKLS 363

Query: 221 KENSFNRXXXXXXXXXXXXXXXXDWVSELVK 129
           KENS +R                 WVSELVK
Sbjct: 364 KENSVDR----DRGDSGVSGPDVGWVSELVK 390


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